RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 MAP3K12Q12852 859 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 RALYLQ86SE5 291 aaKnown RBP8.91□□□□□ -0.98
SNX13-208ENST00000482558 VGLL2Q8N8G2 317 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 NECAB1Q8N987 351 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 SEC16BQ96JE7 1060 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 ZNF396Q96N95 335 aaPredicted RBP8.91□□□□□ -0.98
SNX13-208ENST00000482558 PANK2Q9BZ23 570 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 DNAJC25Q9H1X3 360 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 GREM2Q9H772 168 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 HOMER2Q9NSB8 354 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 DDX19AQ9NUU7 478 aaKnown RBP8.91□□□□□ -0.98
SNX13-208ENST00000482558 SNTG2Q9NY99 539 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 CNPY2Q9Y2B0 182 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 DOT1LQ8TEK3 1739 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 LRP5O75197 1615 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 CDKL5O76039 1030 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 MED26O95402 600 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 FGFR2P21802 821 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 GPTP24298 496 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 ADD2P35612 726 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 CRKLP46109 303 aaKnown RBP8.9□□□□□ -0.98
SNX13-208ENST00000482558 NT5C2P49902 561 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 ST3GAL1Q11201 340 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 INTS5Q6P9B9 1019 aaKnown RBP8.9□□□□□ -0.98
SNX13-208ENST00000482558 CPLX2Q6PUV4 134 aaKnown RBP8.9□□□□□ -0.98
SNX13-208ENST00000482558 CCDC129Q6ZRS4 1044 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 ZSCAN30Q86W11 494 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 CACTIN-AS1Q8N1I8 211 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 RASGRP4Q8TDF6 673 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 BRF1Q92994 677 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 OSBP2Q969R2 916 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 PLD4Q96BZ4 506 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 SCYL1Q96KG9 808 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 DEPDC7Q96QD5 511 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 SEC62Q99442 399 aaKnown RBP8.9□□□□□ -0.98
SNX13-208ENST00000482558 C12orf49Q9H741 205 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 CNNM2Q9H8M5 875 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 ZNF408Q9H9D4 720 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 CCDC39Q9UFE4 941 aa8.9□□□□□ -0.98
SNX13-208ENST00000482558 MYH7P12883 1935 aa8.9□□□□□ -0.99
SNX13-208ENST00000482558 ARAP2Q8WZ64 1704 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 CTAGE5O15320 804 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 GPAA1O43292 621 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 FIBPO43427 364 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 CAMTA2O94983 1202 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 TPM3P06753 285 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 VIL1P09327 827 aaKnown RBP8.89□□□□□ -0.99
SNX13-208ENST00000482558 CCDC192P0DO97 292 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 HOXD8P13378 290 aaPredicted RBP8.89□□□□□ -0.99
SNX13-208ENST00000482558 EIF4BP23588 611 aaKnown RBP8.89□□□□□ -0.99
SNX13-208ENST00000482558 MSNP26038 577 aaKnown RBP8.89□□□□□ -0.99
SNX13-208ENST00000482558 GYS2P54840 703 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 FOXD4Q12950 439 aaPredicted RBP8.89□□□□□ -0.99
SNX13-208ENST00000482558 SETDB1Q15047 1291 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 VPS72Q15906 364 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 SLC9C2Q5TAH2 1124 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 TTC39BQ5VTQ0 682 aaPredicted RBP8.89□□□□□ -0.99
SNX13-208ENST00000482558 HOMER1Q86YM7 354 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 SH3TC2Q8TF17 1288 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 TMEM87BQ96K49 555 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 NACAP1Q9BZK3 213 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 NYXQ9GZU5 481 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 MUC3BQ9H195 1237 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 RBSNQ9H1K0 784 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 STOML1Q9UBI4 398 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 RNF114Q9Y508 228 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 LAMB2P55268 1798 aa8.89□□□□□ -0.99
SNX13-208ENST00000482558 UBN2Q6ZU65 1347 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 CNTNAP4Q9C0A0 1308 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 M0R2C6 588 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 GADD45BO75293 160 aaPredicted RBP8.88□□□□□ -0.99
SNX13-208ENST00000482558 FGAP02671 866 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 PDIA3P30101 505 aaKnown RBP8.88□□□□□ -0.99
SNX13-208ENST00000482558 ADORA1P30542 326 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 MCAMP43121 646 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 RCAN1P53805 252 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 SCRN1Q12765 414 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 MAP9Q49MG5 647 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 LCE1DQ5T752 114 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 STOX1Q6ZVD7 989 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 HFE2Q6ZVN8 426 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 ANKS3Q6ZW76 656 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 KIAA0907Q7Z7F0 614 aaPredicted RBP8.88□□□□□ -0.99
SNX13-208ENST00000482558 IL22RA1Q8N6P7 574 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 MARCH10Q8NA82 808 aaPredicted RBP8.88□□□□□ -0.99
SNX13-208ENST00000482558 SPATA5Q8NB90 893 aa8.88□□□□□ -0.99
SNX13-208ENST00000482558 NSUN7Q8NE18 718 aaKnown RBP8.88□□□□□ -0.99
SNX13-208ENST00000482558 SALL1Q9NSC2 1324 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 TGFB1P01137 390 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 PCP11498 1178 aaKnown RBP8.87□□□□□ -0.99
SNX13-208ENST00000482558 GLB1P16278 677 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 RESTQ13127 1097 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 STK3Q13188 491 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 RASA3Q14644 834 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 PPP2R5BQ15173 497 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 SF3B3Q15393 1217 aaKnown RBP8.87□□□□□ -0.99
SNX13-208ENST00000482558 MAP3K11Q16584 847 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 SLC10A5Q5PT55 438 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 SUSD4Q5VX71 490 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 CDC37L1Q7L3B6 337 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms