RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 STXBP3O00186 592 aa19■□□□□ 0.63
VAMP4-204ENST00000482519 ZNF286BP0CG31 522 aa19■□□□□ 0.63
VAMP4-204ENST00000482519 TGFB3P10600 412 aa19■□□□□ 0.63
VAMP4-204ENST00000482519 PDIA3P30101 505 aaKnown RBP19■□□□□ 0.63
VAMP4-204ENST00000482519 ADCY7P51828 1080 aa19■□□□□ 0.63
VAMP4-204ENST00000482519 EPHB4P54760 987 aa19■□□□□ 0.63
VAMP4-204ENST00000482519 AKAP17AQ02040 695 aaKnown RBP19■□□□□ 0.63
VAMP4-204ENST00000482519 MFSD5Q6N075 450 aa19■□□□□ 0.63
VAMP4-204ENST00000482519 PHKBQ93100 1093 aa19■□□□□ 0.63
VAMP4-204ENST00000482519 AGXT2Q9BYV1 514 aa19■□□□□ 0.63
VAMP4-204ENST00000482519 NCOA5Q9HCD5 579 aaKnown RBP19■□□□□ 0.63
VAMP4-204ENST00000482519 PDRG1Q9NUG6 133 aa19■□□□□ 0.63
VAMP4-204ENST00000482519 BARHL2Q9NY43 387 aa19■□□□□ 0.63
VAMP4-204ENST00000482519 LAMA3Q16787 3333 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 SPATA31C2B4DYI2 1134 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 SUPT20HL2P0C7V6 817 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 CYP2C9P11712 490 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 TOB2Q14106 344 aaPredicted RBP18.99■□□□□ 0.63
VAMP4-204ENST00000482519 LRIT3Q3SXY7 679 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 PPP1R18Q6NYC8 613 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 XRRA1Q6P2D8 792 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 NFRKBQ6P4R8 1299 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 NLRX1Q86UT6 975 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 TMEM199Q8N511 208 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 INPP4AQ96PE3 977 aaPredicted RBP18.99■□□□□ 0.63
VAMP4-204ENST00000482519 ALG1Q9BT22 464 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 TM6SF1Q9BZW5 370 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 BCAS3Q9H6U6 928 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 RIC8AQ9NPQ8 531 aa18.99■□□□□ 0.63
VAMP4-204ENST00000482519 SZT2Q5T011 3432 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 hCG_1984214I3L0E3 225 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 FIBPO43427 364 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 SCG2P13521 617 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 CSF2RAP15509 400 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 CCL23P55773 120 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 SP4Q02446 784 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 STK3Q13188 491 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 PFKFB3Q16875 520 aaPredicted RBP18.98■□□□□ 0.63
VAMP4-204ENST00000482519 HSDL1Q3SXM5 330 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 CYFIP1Q7L576 1253 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 ZNF713Q8N859 430 aaPredicted RBP18.98■□□□□ 0.63
VAMP4-204ENST00000482519 KAT2BQ92831 832 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 PGBD1Q96JS3 809 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 SLC26A6Q9BXS9 759 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 EHMT1Q9H9B1 1298 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 NOD1Q9Y239 953 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 SCN10AQ9Y5Y9 1956 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 UMODL1Q5DID0 1318 aa18.98■□□□□ 0.63
VAMP4-204ENST00000482519 NOP56O00567 594 aaKnown RBP18.97■□□□□ 0.63
VAMP4-204ENST00000482519 PRPF3O43395 683 aaKnown RBP18.97■□□□□ 0.63
VAMP4-204ENST00000482519 PPFIA4O75335 1185 aa18.97■□□□□ 0.63
VAMP4-204ENST00000482519 ICAM3P32942 547 aa18.97■□□□□ 0.63
VAMP4-204ENST00000482519 PSEN2P49810 448 aa18.97■□□□□ 0.63
VAMP4-204ENST00000482519 PPIGQ13427 754 aaKnown RBP eCLIP18.97■□□□□ 0.63
VAMP4-204ENST00000482519 NEDD9Q14511 834 aa18.97■□□□□ 0.63
VAMP4-204ENST00000482519 C7orf31Q8N865 590 aa18.97■□□□□ 0.63
VAMP4-204ENST00000482519 RNPC3Q96LT9 517 aaKnown RBP18.97■□□□□ 0.63
VAMP4-204ENST00000482519 NOC4LQ9BVI4 516 aaKnown RBP18.97■□□□□ 0.63
VAMP4-204ENST00000482519 TMEM260Q9NX78 707 aa18.97■□□□□ 0.63
VAMP4-204ENST00000482519 PKD2L1Q9P0L9 805 aa18.97■□□□□ 0.63
VAMP4-204ENST00000482519 DOCK5Q9H7D0 1870 aa18.97■□□□□ 0.63
VAMP4-204ENST00000482519 NID2Q14112 1375 aa18.96■□□□□ 0.63
VAMP4-204ENST00000482519 ACRP10323 421 aa18.96■□□□□ 0.63
VAMP4-204ENST00000482519 EVCP57679 992 aa18.96■□□□□ 0.63
VAMP4-204ENST00000482519 PTPN11Q06124 597 aaPredicted RBP18.96■□□□□ 0.63
VAMP4-204ENST00000482519 SEMA3FQ13275 785 aa18.96■□□□□ 0.63
VAMP4-204ENST00000482519 MFSD10Q14728 455 aa18.96■□□□□ 0.63
VAMP4-204ENST00000482519 PTGISQ16647 500 aa18.96■□□□□ 0.63
VAMP4-204ENST00000482519 KATNAL1Q9BW62 490 aa18.96■□□□□ 0.63
VAMP4-204ENST00000482519 CPLX1O14810 134 aa18.95■□□□□ 0.62
VAMP4-204ENST00000482519 FOSP01100 380 aaPredicted RBP18.95■□□□□ 0.62
VAMP4-204ENST00000482519 ITGB5P18084 799 aa18.95■□□□□ 0.62
VAMP4-204ENST00000482519 MTMR1Q13613 665 aa18.95■□□□□ 0.62
VAMP4-204ENST00000482519 NTRK3Q16288 839 aa18.95■□□□□ 0.62
VAMP4-204ENST00000482519 KIAA0753Q2KHM9 967 aa18.95■□□□□ 0.62
VAMP4-204ENST00000482519 JAKMIP3Q5VZ66 844 aa18.95■□□□□ 0.62
VAMP4-204ENST00000482519 METTL7BQ6UX53 244 aa18.95■□□□□ 0.62
VAMP4-204ENST00000482519 GPRASP2Q96D09 838 aa18.95■□□□□ 0.62
VAMP4-204ENST00000482519 GLT8D2Q9H1C3 349 aa18.95■□□□□ 0.62
VAMP4-204ENST00000482519 EIF5BO60841 1220 aaKnown RBP18.94■□□□□ 0.62
VAMP4-204ENST00000482519 IFNAR1P17181 557 aa18.94■□□□□ 0.62
VAMP4-204ENST00000482519 PKN1Q16512 942 aa18.94■□□□□ 0.62
VAMP4-204ENST00000482519 GDF6Q6KF10 455 aaPredicted RBP18.94■□□□□ 0.62
VAMP4-204ENST00000482519 CCDC12Q8WUD4 166 aaPredicted RBP18.94■□□□□ 0.62
VAMP4-204ENST00000482519 ZNF274Q96GC6 653 aaPredicted RBP18.94■□□□□ 0.62
VAMP4-204ENST00000482519 SCLYQ96I15 445 aa18.94■□□□□ 0.62
VAMP4-204ENST00000482519 CDHR1Q96JP9 859 aa18.94■□□□□ 0.62
VAMP4-204ENST00000482519 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.94■□□□□ 0.62
VAMP4-204ENST00000482519 ANO3Q9BYT9 981 aa18.94■□□□□ 0.62
VAMP4-204ENST00000482519 C6orf50Q9HD87 102 aa18.94■□□□□ 0.62
VAMP4-204ENST00000482519 HDAC6Q9UBN7 1215 aa18.94■□□□□ 0.62
VAMP4-204ENST00000482519 ATP9AO75110 1047 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 SEC24BO95487 1268 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 F2P00734 622 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 ZNF76P36508 570 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 ANAPC15P60006 121 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 SSRP1Q08945 709 aaKnown RBP18.93■□□□□ 0.62
VAMP4-204ENST00000482519 UTP14CQ5TAP6 766 aaKnown RBP18.93■□□□□ 0.62
VAMP4-204ENST00000482519 C16orf59Q7L2K0 433 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 TRIM22Q8IYM9 498 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms