RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 MYH10P35580 1976 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 RAD51CO43502 376 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 NF2P35240 595 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 ADAM9Q13443 819 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 UBE4AQ14139 1066 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 DDB1Q16531 1140 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 ALS2CLQ60I27 953 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 CCT8L2Q96SF2 557 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 BCS1LQ9Y276 419 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 ERVV-1B6SEH8 477 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 G3V3G9 751 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 DCAF8Q5TAQ9 597 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 RDH13Q8NBN7 331 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 MGARPQ8TDB4 240 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 MST1RQ04912 1400 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 CYTH3O43739 400 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 VIMP08670 466 aaKnown RBP13.97□□□□□ -0.17
VPS52-218ENST00000482399 COPB2P35606 906 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 SLCO1A2P46721 670 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 TMED8Q6PL24 325 aaPredicted RBP13.97□□□□□ -0.17
VPS52-218ENST00000482399 U2AF1L4Q8WU68 220 aaKnown RBP13.97□□□□□ -0.17
VPS52-218ENST00000482399 SETDB2Q96T68 719 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 CCSER1Q9C0I3 900 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 AMACRQ9UHK6 382 aa13.97□□□□□ -0.17
VPS52-218ENST00000482399 A0A087X0T9 212 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 E9PMD0 336 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 PPP1R37O75864 691 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 FAM228BP0C875 321 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 CYP4A11Q02928 519 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 MEA1Q16626 185 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 MIIPQ5JXC2 388 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 NLRP14Q86W24 1093 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 GPBP1Q86WP2 473 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 MMGT1Q8N4V1 131 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 ARFGAP2Q8N6H7 521 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 CASKIN2Q8WXE0 1202 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 NUDT12Q9BQG2 462 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 BARHL2Q9NY43 387 aa13.96□□□□□ -0.17
VPS52-218ENST00000482399 MEFVO15553 781 aaPredicted RBP13.96□□□□□ -0.18
VPS52-218ENST00000482399 LRRC15Q8TF66 581 aa13.96□□□□□ -0.18
VPS52-218ENST00000482399 ZNF473Q8WTR7 871 aaKnown RBP13.96□□□□□ -0.18
VPS52-218ENST00000482399 IL17RBQ9NRM6 502 aa13.96□□□□□ -0.18
VPS52-218ENST00000482399 GGT7Q9UJ14 662 aa13.96□□□□□ -0.18
VPS52-218ENST00000482399 COL4A3BPQ9Y5P4 624 aa13.96□□□□□ -0.18
VPS52-218ENST00000482399 USP17L5A8MUK1 530 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 CLIC2O15247 247 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 PDE6BP35913 854 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 FKBP3Q00688 224 aaKnown RBP13.95□□□□□ -0.18
VPS52-218ENST00000482399 DHX9Q08211 1270 aaKnown RBP13.95□□□□□ -0.18
VPS52-218ENST00000482399 KLHDC7AQ5VTJ3 777 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 RCSD1Q6JBY9 416 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 VPS36Q86VN1 386 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 KIRREL3Q8IZU9 778 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 MTA3Q9BTC8 594 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 PCDHA12Q9UN75 941 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 RASSF10A6NK89 507 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 CETN3O15182 167 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 DAPK3O43293 454 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 RPS6KA5O75582 802 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 GBP2P32456 591 aaPredicted RBP13.95□□□□□ -0.18
VPS52-218ENST00000482399 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
VPS52-218ENST00000482399 ZSCAN29Q8IWY8 852 aaPredicted RBP13.95□□□□□ -0.18
VPS52-218ENST00000482399 CEP89Q96ST8 783 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 CELF4Q9BZC1 486 aaKnown RBP13.95□□□□□ -0.18
VPS52-218ENST00000482399 ZNF287Q9HBT7 754 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 SRP68Q9UHB9 627 aaKnown RBP13.95□□□□□ -0.18
VPS52-218ENST00000482399 PHF20L1A8MW92 1017 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 C6orf229H3BNL8 230 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 STXBP3O00186 592 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 NR2F2P24468 414 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 ADCY7P51828 1080 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 ADCY1Q08828 1119 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 MSL1Q68DK7 614 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 PDXDC1Q6P996 788 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 ANAPC4Q9UJX5 808 aa13.95□□□□□ -0.18
VPS52-218ENST00000482399 SFI1A8K8P3 1242 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 ZNF76P36508 570 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 MAGOHP61326 146 aaKnown RBP13.94□□□□□ -0.18
VPS52-218ENST00000482399 PABPC4Q13310 644 aaKnown RBP eCLIP13.94□□□□□ -0.183e-6■■■□□ 15.2
VPS52-218ENST00000482399 PPP1R7Q15435 360 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 SLC51AQ86UW1 340 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 MDM1Q8TC05 714 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 MAGOHBQ96A72 148 aaKnown RBP13.94□□□□□ -0.18
VPS52-218ENST00000482399 ERGIC2Q96RQ1 377 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 ZNF233A6NK53 670 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 SLC37A4O43826 429 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 CLTAP09496 248 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 NAA25Q14CX7 972 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 ARHGAP44Q17R89 818 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 CCDC65Q8IXS2 484 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 C4orf32Q8N8J7 132 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 TCP11Q8WWU5 503 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 FAM212AQ96EL1 285 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 ATP6V1G3Q96LB4 118 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 NCAPGQ9BPX3 1015 aa13.94□□□□□ -0.18
VPS52-218ENST00000482399 ZNF211Q13398 564 aaPredicted RBP13.93□□□□□ -0.18
VPS52-218ENST00000482399 ZFYVE27Q5T4F4 411 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 UNC13DQ70J99 1090 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 MAEAQ7L5Y9 396 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 DGKHQ86XP1 1220 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms