RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 APTXQ7Z2E3 356 aaKnown RBP17.63■□□□□ 0.41
RXRA-202ENST00000481739 PRPF38AQ8NAV1 312 aaKnown RBP17.63■□□□□ 0.41
RXRA-202ENST00000481739 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
RXRA-202ENST00000481739 TMX1Q9H3N1 280 aa17.63■□□□□ 0.41
RXRA-202ENST00000481739 HAUS3Q68CZ6 603 aa17.63■□□□□ 0.41
RXRA-202ENST00000481739 KCTD17Q8N5Z5 321 aa17.63■□□□□ 0.41
RXRA-202ENST00000481739 RBM46Q8TBY0 533 aaKnown RBP17.63■□□□□ 0.41
RXRA-202ENST00000481739 RAD54LQ92698 747 aa17.63■□□□□ 0.41
RXRA-202ENST00000481739 OTUD5Q96G74 571 aa17.63■□□□□ 0.41
RXRA-202ENST00000481739 FAM20AQ96MK3 541 aa17.63■□□□□ 0.41
RXRA-202ENST00000481739 RANBP17Q9H2T7 1088 aaKnown RBP17.63■□□□□ 0.41
RXRA-202ENST00000481739 THAP9Q9H5L6 903 aa17.63■□□□□ 0.41
RXRA-202ENST00000481739 BLOC1S4Q9NUP1 217 aa17.63■□□□□ 0.41
RXRA-202ENST00000481739 GDAQ9Y2T3 454 aa17.63■□□□□ 0.41
RXRA-202ENST00000481739 CTDP1Q9Y5B0 961 aaPredicted RBP17.63■□□□□ 0.41
RXRA-202ENST00000481739 CYP3A4P08684 503 aa17.62■□□□□ 0.41
RXRA-202ENST00000481739 EEF1GP26641 437 aaKnown RBP17.62■□□□□ 0.41
RXRA-202ENST00000481739 PDE4DQ08499 809 aa17.62■□□□□ 0.41
RXRA-202ENST00000481739 FOXR2Q6PJQ5 311 aa17.62■□□□□ 0.41
RXRA-202ENST00000481739 UNC13DQ70J99 1090 aa17.62■□□□□ 0.41
RXRA-202ENST00000481739 ERO1BQ86YB8 467 aa17.62■□□□□ 0.41
RXRA-202ENST00000481739 CCAR2Q8N163 923 aaKnown RBP17.62■□□□□ 0.41
RXRA-202ENST00000481739 LRRC15Q8TF66 581 aa17.62■□□□□ 0.41
RXRA-202ENST00000481739 PNMA5Q96PV4 448 aa17.62■□□□□ 0.41
RXRA-202ENST00000481739 PLIN2Q99541 437 aa17.62■□□□□ 0.41
RXRA-202ENST00000481739 EHMT1Q9H9B1 1298 aa17.62■□□□□ 0.41
RXRA-202ENST00000481739 PAPPA2Q9BXP8 1791 aa17.62■□□□□ 0.41
RXRA-202ENST00000481739 MYH7BA7E2Y1 1941 aa17.62■□□□□ 0.41
RXRA-202ENST00000481739 POTEMA6NI47 508 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 TAL1P17542 331 aaPredicted RBP17.61■□□□□ 0.41
RXRA-202ENST00000481739 PPATQ06203 517 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 TRIM14Q14142 442 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 C12orf42Q96LP6 360 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 MRPL11Q9Y3B7 192 aaKnown RBP17.61■□□□□ 0.41
RXRA-202ENST00000481739 PAXBP1Q9Y5B6 917 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 ARHGAP6O43182 974 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 STX10O60499 249 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 PBX1P40424 430 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 PSMD2Q13200 908 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 HSP90AA4PQ58FG1 418 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 TCP11X2Q5H9J9 407 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 FAM114A1Q8IWE2 563 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 ERMNQ8TAM6 284 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 PNMA2Q9UL42 364 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 PPP1R9AQ9ULJ8 1098 aa17.61■□□□□ 0.41
RXRA-202ENST00000481739 KCNJ18B7U540 433 aa17.6■□□□□ 0.41
RXRA-202ENST00000481739 TPM1P09493 284 aa17.6■□□□□ 0.41
RXRA-202ENST00000481739 CCNE1P24864 410 aa17.6■□□□□ 0.41
RXRA-202ENST00000481739 KCNJ12Q14500 433 aa17.6■□□□□ 0.41
RXRA-202ENST00000481739 MYRIPQ8NFW9 859 aa17.6■□□□□ 0.41
RXRA-202ENST00000481739 NAA15Q9BXJ9 866 aaKnown RBP17.6■□□□□ 0.41
RXRA-202ENST00000481739 BMP2KQ9NSY1 1161 aaPredicted RBP17.6■□□□□ 0.41
RXRA-202ENST00000481739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.6■□□□□ 0.41
RXRA-202ENST00000481739 ABCB11O95342 1321 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 IRF6O14896 467 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 ZBED4O75132 1171 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 TNNT1P13805 278 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 KRT31Q15323 416 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 PTPN14Q15678 1187 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 SH3D19Q5HYK7 790 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 GADL1Q6ZQY3 521 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 NYAP1Q6ZVC0 841 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 PPFIBP1Q86W92 1011 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 ETNPPLQ8TBG4 499 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 P2RX5Q93086 422 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 SLC10A4Q96EP9 437 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 CCDC51Q96ER9 411 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 TRIM47Q96LD4 638 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 C16orf45Q96MC5 204 aaPredicted RBP17.59■□□□□ 0.41
RXRA-202ENST00000481739 PANX2Q96RD6 677 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 MAGEC2Q9UBF1 373 aaPredicted RBP17.59■□□□□ 0.41
RXRA-202ENST00000481739 RABGAP1Q9Y3P9 1069 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 SMCHD1A6NHR9 2005 aa17.59■□□□□ 0.41
RXRA-202ENST00000481739 SPDYE5A6NIY4 337 aa17.58■□□□□ 0.41
RXRA-202ENST00000481739 GCOM1H8Y6P7 765 aaPredicted RBP17.58■□□□□ 0.41
RXRA-202ENST00000481739 OPLAHO14841 1288 aa17.58■□□□□ 0.41
RXRA-202ENST00000481739 POLR2MP0CAP2 368 aa17.58■□□□□ 0.41
RXRA-202ENST00000481739 CCT6AP40227 531 aaKnown RBP17.58■□□□□ 0.41
RXRA-202ENST00000481739 TTI2Q6NXR4 508 aa17.58■□□□□ 0.41
RXRA-202ENST00000481739 CPXCR1Q8N123 301 aa17.58■□□□□ 0.41
RXRA-202ENST00000481739 OPTNQ96CV9 577 aa17.58■□□□□ 0.41
RXRA-202ENST00000481739 CCPG1Q9ULG6 757 aa17.58■□□□□ 0.41
RXRA-202ENST00000481739 GOLGA6L9A6NEM1 432 aa17.58■□□□□ 0.4
RXRA-202ENST00000481739 AKR1B15C9JRZ8 316 aaPredicted RBP17.58■□□□□ 0.4
RXRA-202ENST00000481739 N4BP3O15049 544 aa17.58■□□□□ 0.4
RXRA-202ENST00000481739 CELF2O95319 508 aaKnown RBP17.58■□□□□ 0.4
RXRA-202ENST00000481739 GTF2F1P35269 517 aaKnown RBP eCLIP17.58■□□□□ 0.49e-7■■■■□ 23.1
RXRA-202ENST00000481739 COPB1P53618 953 aaKnown RBP17.58■□□□□ 0.4
RXRA-202ENST00000481739 MCM6Q14566 821 aa17.58■□□□□ 0.4
RXRA-202ENST00000481739 LDLRAD1Q5T700 205 aa17.58■□□□□ 0.4
RXRA-202ENST00000481739 E4F1Q66K89 784 aaPredicted RBP17.58■□□□□ 0.4
RXRA-202ENST00000481739 CNGA4Q8IV77 575 aa17.58■□□□□ 0.4
RXRA-202ENST00000481739 ATG4CQ96DT6 458 aa17.58■□□□□ 0.4
RXRA-202ENST00000481739 AGBL1Q96MI9 1066 aa17.58■□□□□ 0.4
RXRA-202ENST00000481739 BAG1Q99933 345 aaPredicted RBP17.58■□□□□ 0.4
RXRA-202ENST00000481739 UQCRHLA0A096LP55 91 aa17.57■□□□□ 0.4
RXRA-202ENST00000481739 MYMKA6NI61 221 aa17.57■□□□□ 0.4
RXRA-202ENST00000481739 DYNC1I1O14576 645 aa17.57■□□□□ 0.4
RXRA-202ENST00000481739 CXCL11O14625 94 aa17.57■□□□□ 0.4
RXRA-202ENST00000481739 ZSCAN12O43309 604 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms