RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 SMCO2A6NFE2 343 aa21.48■■□□□ 1.03
HSPG2-210ENST00000481644 FIBPO43427 364 aa21.48■■□□□ 1.03
HSPG2-210ENST00000481644 B4GALT4O60513 344 aa21.48■■□□□ 1.03
HSPG2-210ENST00000481644 SCG2P13521 617 aa21.48■■□□□ 1.03
HSPG2-210ENST00000481644 ICAM3P32942 547 aa21.48■■□□□ 1.03
HSPG2-210ENST00000481644 CHMP4BP1P59074 171 aa21.48■■□□□ 1.03
HSPG2-210ENST00000481644 ANAPC15P60006 121 aa21.48■■□□□ 1.03
HSPG2-210ENST00000481644 AKAP17AQ02040 695 aaKnown RBP21.48■■□□□ 1.03
HSPG2-210ENST00000481644 SP2Q02086 613 aa21.48■■□□□ 1.03
HSPG2-210ENST00000481644 MYSM1Q5VVJ2 828 aa21.48■■□□□ 1.03
HSPG2-210ENST00000481644 TEX2Q8IWB9 1127 aa21.48■■□□□ 1.03
HSPG2-210ENST00000481644 SPATA33Q96N06 139 aa21.48■■□□□ 1.03
HSPG2-210ENST00000481644 TRPV6Q9H1D0 765 aa21.48■■□□□ 1.03
HSPG2-210ENST00000481644 NCOA5Q9HCD5 579 aaKnown RBP21.48■■□□□ 1.03
HSPG2-210ENST00000481644 SPATA31C2B4DYI2 1134 aa21.47■■□□□ 1.03
HSPG2-210ENST00000481644 PRPF3O43395 683 aaKnown RBP21.47■■□□□ 1.03
HSPG2-210ENST00000481644 SLC34A2O95436 690 aa21.47■■□□□ 1.03
HSPG2-210ENST00000481644 FPGSQ05932 587 aa21.47■■□□□ 1.03
HSPG2-210ENST00000481644 NFRKBQ6P4R8 1299 aa21.47■■□□□ 1.03
HSPG2-210ENST00000481644 NLRX1Q86UT6 975 aa21.47■■□□□ 1.03
HSPG2-210ENST00000481644 PPP1R13LQ8WUF5 828 aa21.47■■□□□ 1.03
HSPG2-210ENST00000481644 PHKBQ93100 1093 aa21.47■■□□□ 1.03
HSPG2-210ENST00000481644 ZNF274Q96GC6 653 aaPredicted RBP21.47■■□□□ 1.03
HSPG2-210ENST00000481644 LARP6Q9BRS8 491 aaKnown RBP21.47■■□□□ 1.03
HSPG2-210ENST00000481644 PPP1R12CQ9BZL4 782 aa21.47■■□□□ 1.03
HSPG2-210ENST00000481644 GLT8D2Q9H1C3 349 aa21.47■■□□□ 1.03
HSPG2-210ENST00000481644 MLXIPQ9HAP2 919 aa21.47■■□□□ 1.03
HSPG2-210ENST00000481644 IFNAR1P17181 557 aa21.46■■□□□ 1.03
HSPG2-210ENST00000481644 SEMA3FQ13275 785 aa21.46■■□□□ 1.03
HSPG2-210ENST00000481644 NTRK3Q16288 839 aa21.46■■□□□ 1.03
HSPG2-210ENST00000481644 HSDL1Q3SXM5 330 aa21.46■■□□□ 1.03
HSPG2-210ENST00000481644 SLC26A6Q9BXS9 759 aa21.46■■□□□ 1.03
HSPG2-210ENST00000481644 RNF26Q9BY78 433 aaPredicted RBP21.46■■□□□ 1.03
HSPG2-210ENST00000481644 HIPK3Q9H422 1215 aa21.46■■□□□ 1.03
HSPG2-210ENST00000481644 SOX1O00570 391 aaPredicted RBP21.45■■□□□ 1.02
HSPG2-210ENST00000481644 PPFIA3O75145 1194 aa21.45■■□□□ 1.02
HSPG2-210ENST00000481644 FOSP01100 380 aaPredicted RBP21.45■■□□□ 1.02
HSPG2-210ENST00000481644 SUPT20HL2P0C7V6 817 aa21.45■■□□□ 1.02
HSPG2-210ENST00000481644 ZNF286BP0CG31 522 aa21.45■■□□□ 1.02
HSPG2-210ENST00000481644 PTPN11Q06124 597 aaPredicted RBP21.45■■□□□ 1.02
HSPG2-210ENST00000481644 NEDD9Q14511 834 aa21.45■■□□□ 1.02
HSPG2-210ENST00000481644 PKN1Q16512 942 aa21.45■■□□□ 1.02
HSPG2-210ENST00000481644 LRIT3Q3SXY7 679 aa21.45■■□□□ 1.02
HSPG2-210ENST00000481644 MFSD5Q6N075 450 aa21.45■■□□□ 1.02
HSPG2-210ENST00000481644 CCDC12Q8WUD4 166 aaPredicted RBP21.45■■□□□ 1.02
HSPG2-210ENST00000481644 KAT2BQ92831 832 aa21.45■■□□□ 1.02
HSPG2-210ENST00000481644 KATNAL1Q9BW62 490 aa21.45■■□□□ 1.02
HSPG2-210ENST00000481644 TRMT13Q9NUP7 481 aaKnown RBP21.45■■□□□ 1.02
HSPG2-210ENST00000481644 HOXD8P13378 290 aaPredicted RBP21.44■■□□□ 1.02
HSPG2-210ENST00000481644 CYP2C18P33260 490 aa21.44■■□□□ 1.02
HSPG2-210ENST00000481644 STK3Q13188 491 aa21.44■■□□□ 1.02
HSPG2-210ENST00000481644 SHHQ15465 462 aa21.44■■□□□ 1.02
HSPG2-210ENST00000481644 C9orf50Q5SZB4 431 aa21.44■■□□□ 1.02
HSPG2-210ENST00000481644 TMEM199Q8N511 208 aa21.44■■□□□ 1.02
HSPG2-210ENST00000481644 GPRASP2Q96D09 838 aa21.44■■□□□ 1.02
HSPG2-210ENST00000481644 CDHR1Q96JP9 859 aa21.44■■□□□ 1.02
HSPG2-210ENST00000481644 PGBD1Q96JS3 809 aa21.44■■□□□ 1.02
HSPG2-210ENST00000481644 BCAS3Q9H6U6 928 aa21.44■■□□□ 1.02
HSPG2-210ENST00000481644 ESYT2A0FGR8 921 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 NOP56O00567 594 aaKnown RBP21.43■■□□□ 1.02
HSPG2-210ENST00000481644 CPLX1O14810 134 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 PPFIA4O75335 1185 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 ITGB5P18084 799 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 CLK2P49760 499 aaKnown RBP21.43■■□□□ 1.02
HSPG2-210ENST00000481644 PSEN2P49810 448 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 EPHB4P54760 987 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 AP3B2Q13367 1082 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 PPIGQ13427 754 aaKnown RBP eCLIP21.43■■□□□ 1.021e-7■□□□□ 10.9
HSPG2-210ENST00000481644 METTL7BQ6UX53 244 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 CYFIP1Q7L576 1253 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 TRIM22Q8IYM9 498 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 LRCH3Q96II8 777 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 NOC4LQ9BVI4 516 aaKnown RBP21.43■■□□□ 1.02
HSPG2-210ENST00000481644 ANO3Q9BYT9 981 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 C6orf50Q9HD87 102 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 TMEM260Q9NX78 707 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 UBIAD1Q9Y5Z9 338 aa21.43■■□□□ 1.02
HSPG2-210ENST00000481644 SEC24BO95487 1268 aa21.42■■□□□ 1.02
HSPG2-210ENST00000481644 F2P00734 622 aa21.42■■□□□ 1.02
HSPG2-210ENST00000481644 MTMR1Q13613 665 aa21.42■■□□□ 1.02
HSPG2-210ENST00000481644 MFSD10Q14728 455 aa21.42■■□□□ 1.02
HSPG2-210ENST00000481644 UMODL1Q5DID0 1318 aa21.42■■□□□ 1.02
HSPG2-210ENST00000481644 GIMAP8Q8ND71 665 aaPredicted RBP21.42■■□□□ 1.02
HSPG2-210ENST00000481644 SENP7Q9BQF6 1050 aa21.42■■□□□ 1.02
HSPG2-210ENST00000481644 ALG1Q9BT22 464 aa21.42■■□□□ 1.02
HSPG2-210ENST00000481644 ZMYND12Q9H0C1 365 aa21.42■■□□□ 1.02
HSPG2-210ENST00000481644 NOD1Q9Y239 953 aa21.42■■□□□ 1.02
HSPG2-210ENST00000481644 CYP2C9P11712 490 aa21.41■■□□□ 1.02
HSPG2-210ENST00000481644 CSF2RAP15509 400 aa21.41■■□□□ 1.02
HSPG2-210ENST00000481644 SSRP1Q08945 709 aaKnown RBP21.41■■□□□ 1.02
HSPG2-210ENST00000481644 KIAA0753Q2KHM9 967 aa21.41■■□□□ 1.02
HSPG2-210ENST00000481644 CPLX2Q6PUV4 134 aaKnown RBP21.41■■□□□ 1.02
HSPG2-210ENST00000481644 SESTD1Q86VW0 696 aa21.41■■□□□ 1.02
HSPG2-210ENST00000481644 C7orf31Q8N865 590 aa21.41■■□□□ 1.02
HSPG2-210ENST00000481644 CCDC148Q8NFR7 591 aa21.41■■□□□ 1.02
HSPG2-210ENST00000481644 IL17RAQ96F46 866 aa21.41■■□□□ 1.02
HSPG2-210ENST00000481644 JADE2Q9NQC1 790 aa21.41■■□□□ 1.02
HSPG2-210ENST00000481644 LAMA3Q16787 3333 aa21.4■■□□□ 1.02
HSPG2-210ENST00000481644 HAS3O00219 553 aa21.4■■□□□ 1.02
HSPG2-210ENST00000481644 GNA11P29992 359 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms