RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SEMA3FQ13275 785 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 PWP2Q15269 919 aaKnown RBP12.15□□□□□ -0.46
SSBP1-210ENST00000481508 RABEP1Q15276 862 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 CCDC83Q8IWF9 413 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 SAMD3Q8N6K7 520 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 NSUN7Q8NE18 718 aaKnown RBP12.15□□□□□ -0.46
SSBP1-210ENST00000481508 RASGRP4Q8TDF6 673 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 IWS1Q96ST2 819 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 UPF3AQ9H1J1 476 aaKnown RBP12.15□□□□□ -0.46
SSBP1-210ENST00000481508 LIMCH1Q9UPQ0 1083 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 TCF20Q9UGU0 1960 aaKnown RBP12.14□□□□□ -0.47
SSBP1-210ENST00000481508 hCG_1984214I3L0E3 225 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 DUSP11O75319 330 aaKnown RBP12.14□□□□□ -0.47
SSBP1-210ENST00000481508 COL6A1P12109 1028 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 BEX3Q00994 111 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 NPY5RQ15761 445 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 CCSAPQ6IQ19 270 aaPredicted RBP12.14□□□□□ -0.47
SSBP1-210ENST00000481508 CCDC62Q6P9F0 684 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 SEPT14Q6ZU15 432 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 TLK2Q86UE8 772 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 VSIG10LQ86VR7 867 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 ZNF713Q8N859 430 aaPredicted RBP12.14□□□□□ -0.47
SSBP1-210ENST00000481508 KLHDC9Q8NEP7 349 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 CUL5Q93034 780 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 WDR11Q9BZH6 1224 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 ZMYND12Q9H0C1 365 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 BCAS3Q9H6U6 928 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 UPF2Q9HAU5 1272 aaKnown RBP12.14□□□□□ -0.47
SSBP1-210ENST00000481508 PCDHA6Q9UN73 950 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 PCDHA8Q9Y5H6 950 aa12.14□□□□□ -0.47
SSBP1-210ENST00000481508 STK36Q9NRP7 1315 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 ESYT2A0FGR8 921 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 EDIL3O43854 480 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 SORBS3O60504 671 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 DEXIO95424 95 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 FOSBP53539 338 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 GJA9P57773 515 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 AKAP17AQ02040 695 aaKnown RBP12.13□□□□□ -0.47
SSBP1-210ENST00000481508 STXBP2Q15833 593 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 LY6KQ17RY6 165 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 DUSP28Q4G0W2 176 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 JAKMIP3Q5VZ66 844 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 IQSEC1Q6DN90 963 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 TRIM22Q8IYM9 498 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 ANKLE1Q8NAG6 615 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 ANO3Q9BYT9 981 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 UBE2OQ9C0C9 1292 aaKnown RBP12.13□□□□□ -0.47
SSBP1-210ENST00000481508 C11orf49Q9H6J7 331 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 RTEL1Q9NZ71 1219 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 KCNJ14Q9UNX9 436 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 TELO2Q9Y4R8 837 aa12.13□□□□□ -0.47
SSBP1-210ENST00000481508 WDR81Q562E7 1941 aa12.12□□□□□ -0.47
SSBP1-210ENST00000481508 DNM1LO00429 736 aa12.12□□□□□ -0.47
SSBP1-210ENST00000481508 DYNC1LI2O43237 492 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-210ENST00000481508 EIF3JO75822 258 aaKnown RBP12.12□□□□□ -0.47
SSBP1-210ENST00000481508 C6orf222P0C671 652 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-210ENST00000481508 CCND2P30279 289 aa12.12□□□□□ -0.47
SSBP1-210ENST00000481508 NKX3-2P78367 333 aa12.12□□□□□ -0.47
SSBP1-210ENST00000481508 SP2Q02086 613 aa12.12□□□□□ -0.47
SSBP1-210ENST00000481508 PCNX4Q63HM2 1172 aa12.12□□□□□ -0.47
SSBP1-210ENST00000481508 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
SSBP1-210ENST00000481508 MAFAQ8NHW3 353 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-210ENST00000481508 FERMT2Q96AC1 680 aa12.12□□□□□ -0.47
SSBP1-210ENST00000481508 ORC3Q9UBD5 711 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-210ENST00000481508 SCN10AQ9Y5Y9 1956 aa12.12□□□□□ -0.47
SSBP1-210ENST00000481508 PIEZO1Q92508 2521 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 TMEM265A0A087WTH1 108 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 SPDYE3A6NKU9 549 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 M0R2N6 131 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 CDKL5O76039 1030 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 TXNP10599 105 aaKnown RBP12.11□□□□□ -0.47
SSBP1-210ENST00000481508 ITGB5P18084 799 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 CST5P28325 142 aaPredicted RBP12.11□□□□□ -0.47
SSBP1-210ENST00000481508 MRPL12P52815 198 aaKnown RBP12.11□□□□□ -0.47
SSBP1-210ENST00000481508 ARHGAP1Q07960 439 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 KCNA10Q16322 511 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 LRRC26Q2I0M4 334 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 LCE2DQ5TA82 110 aaPredicted RBP12.11□□□□□ -0.47
SSBP1-210ENST00000481508 CPLX2Q6PUV4 134 aaKnown RBP12.11□□□□□ -0.47
SSBP1-210ENST00000481508 NECAB2Q7Z6G3 386 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 ARRDC4Q8NCT1 418 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 OR6J1Q8NGC5 347 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 CYP2W1Q8TAV3 490 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 SCFD2Q8WU76 684 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 CRYGNQ8WXF5 182 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 INPP4AQ96PE3 977 aaPredicted RBP12.11□□□□□ -0.47
SSBP1-210ENST00000481508 MPHOSPH6Q99547 160 aaKnown RBP12.11□□□□□ -0.47
SSBP1-210ENST00000481508 ALG1Q9BT22 464 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 SENP6Q9GZR1 1112 aaPredicted RBP12.11□□□□□ -0.47
SSBP1-210ENST00000481508 DDX41Q9UJV9 622 aaKnown RBP12.11□□□□□ -0.47
SSBP1-210ENST00000481508 PHF24Q9UPV7 400 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 REV3LO60673 3130 aa12.11□□□□□ -0.47
SSBP1-210ENST00000481508 A0A1W2PQ45 241 aaPredicted RBP12.1□□□□□ -0.47
SSBP1-210ENST00000481508 A0A1W2PQY0 241 aa12.1□□□□□ -0.47
SSBP1-210ENST00000481508 B4DLN1 442 aa12.1□□□□□ -0.47
SSBP1-210ENST00000481508 KBTBD13C9JR72 458 aa12.1□□□□□ -0.47
SSBP1-210ENST00000481508 UBA1P22314 1058 aaKnown RBP12.1□□□□□ -0.47
SSBP1-210ENST00000481508 SREBF1P36956 1147 aa12.1□□□□□ -0.47
SSBP1-210ENST00000481508 ACLYP53396 1101 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms