RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 NEDD9Q14511 834 aa10.33□□□□□ -0.76
GARNL3-216ENST00000481242 MAN2A1Q16706 1144 aa10.33□□□□□ -0.76
GARNL3-216ENST00000481242 TBC1D9BQ66K14 1250 aa10.33□□□□□ -0.76
GARNL3-216ENST00000481242 CASC4Q6P4E1 433 aa10.33□□□□□ -0.76
GARNL3-216ENST00000481242 P2RX5Q93086 422 aa10.33□□□□□ -0.76
GARNL3-216ENST00000481242 MXD3Q9BW11 206 aa10.33□□□□□ -0.76
GARNL3-216ENST00000481242 SNX25Q9H3E2 840 aa10.33□□□□□ -0.76
GARNL3-216ENST00000481242 KIAA1586Q9HCI6 787 aa10.33□□□□□ -0.76
GARNL3-216ENST00000481242 STK36Q9NRP7 1315 aa10.33□□□□□ -0.76
GARNL3-216ENST00000481242 MYO1FO00160 1098 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 SLC16A2P36021 539 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 SEMA3FQ13275 785 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 RINT1Q6NUQ1 792 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 MIGA2Q7L4E1 593 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 PRPF38AQ8NAV1 312 aaKnown RBP10.32□□□□□ -0.76
GARNL3-216ENST00000481242 RNF181Q9P0P0 153 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 PCDHA5Q9Y5H7 936 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 SRPRBQ9Y5M8 271 aaKnown RBP10.32□□□□□ -0.76
GARNL3-216ENST00000481242 PNPLA6Q8IY17 1366 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 NFIXQ14938 502 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 NECTIN1Q15223 517 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 ADCK5Q3MIX3 580 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 PI16Q6UXB8 463 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 INTS8Q75QN2 995 aaKnown RBP10.32□□□□□ -0.76
GARNL3-216ENST00000481242 MICALL1Q8N3F8 863 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 RBM46Q8TBY0 533 aaKnown RBP10.32□□□□□ -0.76
GARNL3-216ENST00000481242 WRNIP1Q96S55 665 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 SETBP1Q9Y6X0 1596 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 LAMC1P11047 1609 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 CLTCL1P53675 1640 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 KIF3CO14782 793 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 AFPP02771 609 aaKnown RBP10.32□□□□□ -0.76
GARNL3-216ENST00000481242 POLR2FP61218 127 aaKnown RBP10.32□□□□□ -0.76
GARNL3-216ENST00000481242 SF3B3Q15393 1217 aaKnown RBP10.32□□□□□ -0.76
GARNL3-216ENST00000481242 LONRF2Q1L5Z9 754 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 TMTC3Q6ZXV5 915 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 RSRC2Q7L4I2 434 aaKnown RBP10.32□□□□□ -0.76
GARNL3-216ENST00000481242 TUBGCP2Q9BSJ2 902 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 IPO11Q9UI26 975 aaKnown RBP10.32□□□□□ -0.76
GARNL3-216ENST00000481242 A6NJR5 290 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 ZNF658Q5TYW1 1059 aaPredicted RBP10.32□□□□□ -0.76
GARNL3-216ENST00000481242 SPATS2LQ9NUQ6 558 aaKnown RBP10.32□□□□□ -0.76
GARNL3-216ENST00000481242 ZNRF3Q9ULT6 936 aa10.32□□□□□ -0.76
GARNL3-216ENST00000481242 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.32□□□□□ -0.76
GARNL3-216ENST00000481242 SFNP31947 248 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 LRRC63Q05C16 580 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 SCYL2Q6P3W7 929 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 KCNV1Q6PIU1 500 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 PI4K2BQ8TCG2 481 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 GPT2Q8TD30 523 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 CELF1Q92879 486 aaKnown RBP10.31□□□□□ -0.76
GARNL3-216ENST00000481242 DYNLL2Q96FJ2 89 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 DDX23Q9BUQ8 820 aaKnown RBP10.31□□□□□ -0.76
GARNL3-216ENST00000481242 ZHX2Q9Y6X8 837 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 NDUFA8P51970 172 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 COPB1P53618 953 aaKnown RBP10.31□□□□□ -0.76
GARNL3-216ENST00000481242 CNOT6LQ96LI5 555 aaKnown RBP10.31□□□□□ -0.76
GARNL3-216ENST00000481242 MRPL47Q9HD33 250 aaKnown RBP10.31□□□□□ -0.76
GARNL3-216ENST00000481242 PFDN4Q9NQP4 134 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 TOPORSQ9NS56 1045 aaPredicted RBP10.31□□□□□ -0.76
GARNL3-216ENST00000481242 NCOA3Q9Y6Q9 1424 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 WDR64B1ANS9 1081 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 K7ERI5 159 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 CCNE1P24864 410 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 NFKBIAP25963 317 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 PPFIA1Q13136 1202 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 STRIP1Q5VSL9 837 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 HHATQ5VTY9 493 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 LINC00301Q8NCQ3 95 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 GTF3C2Q8WUA4 911 aaPredicted RBP10.31□□□□□ -0.76
GARNL3-216ENST00000481242 NLRP7Q8WX94 980 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 TDRD3Q9H7E2 651 aaKnown RBP10.31□□□□□ -0.76
GARNL3-216ENST00000481242 DISC1Q9NRI5 854 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 CLIC4Q9Y696 253 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 DLC1Q96QB1 1528 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 I3L4J1 428 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 ZBTB7AO95365 584 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 ABL1P00519 1130 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 SATB1Q01826 763 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 DNAJC21Q5F1R6 531 aaKnown RBP10.31□□□□□ -0.76
GARNL3-216ENST00000481242 RNF168Q8IYW5 571 aaPredicted RBP10.31□□□□□ -0.76
GARNL3-216ENST00000481242 CLIC6Q96NY7 704 aa10.31□□□□□ -0.76
GARNL3-216ENST00000481242 CPDO75976 1380 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 ABCB4P21439 1286 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 PRDX5P30044 214 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 TNFAIP2Q03169 654 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 PLCB4Q15147 1175 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 TBC1D10BQ4KMP7 808 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-216ENST00000481242 C10orf76Q5T2E6 689 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 B4GALNT4Q76KP1 1039 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 SESTD1Q86VW0 696 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 RMDN3Q96TC7 470 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 CCDC68Q9H2F9 335 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 TTLL3Q9Y4R7 772 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-216ENST00000481242 EIF2AK2P19525 551 aaKnown RBP10.3□□□□□ -0.76
GARNL3-216ENST00000481242 MMP14P50281 582 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 SIRT2Q8IXJ6 389 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 TTC39CQ8N584 583 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 SH3RF3Q8TEJ3 882 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms