RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	GTF2IRD2	Q86UP8	949 aa		5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	RIOX2	Q8IUF8	465 aa		5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	KBTBD2	Q8IY47	623 aa		5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	OR6P1	Q8NGX9	317 aa		5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	NPLOC4	Q8TAT6	608 aa		5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	ZCCHC14	Q8WYQ9	949 aa	Known RBP	5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	GPRASP2	Q96D09	838 aa		5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	TRMT2B	Q96GJ1	504 aa	Known RBP	5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	APBA2	Q99767	749 aa		5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	SLITRK6	Q9H5Y7	841 aa		5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	NGRN	Q9NPE2	291 aa	Known RBP	5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	FBXL7	Q9UJT9	491 aa		5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	ING1	Q9UK53	422 aa	Predicted RBP	5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	TIMM13	Q9Y5L4	95 aa	Predicted RBP	5.51	□□□□□ -1.53
CCNL1-223	ENST00000481173	ARNTL	O00327	626 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	NOP56	O00567	594 aa	Known RBP	5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	B4GALT4	O60513	344 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	EPHB4	P54760	987 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	PPP2CB	P62714	309 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	PPP2CA	P67775	309 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	RBM10	P98175	930 aa	Known RBP	5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	KLF10	Q13118	480 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	SPDYA	Q5MJ70	313 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	PKN3	Q6P5Z2	889 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	POMZP3	Q6PJE2	187 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	CCDC103	Q8IW40	242 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	ARRDC4	Q8NCT1	418 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	WWC2-AS2	Q96NR7	200 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	CLIC6	Q96NY7	704 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	PCED1A	Q9H1Q7	454 aa		5.5	□□□□□ -1.53
CCNL1-223	ENST00000481173	NASP	P49321	788 aa	Predicted RBP	5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	TRIM59	Q8IWR1	403 aa		5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	BTN2A2	Q8WVV5	523 aa		5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	TOE1	Q96GM8	510 aa	Known RBP	5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	TMEM169	Q96HH4	297 aa		5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	NKX2-4	Q9H2Z4	354 aa		5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	ACBD3	Q9H3P7	528 aa		5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	CYP26B1	Q9NR63	512 aa		5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	DTL	Q9NZJ0	730 aa		5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	WASF3	Q9UPY6	502 aa		5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	ZNF652	Q9Y2D9	606 aa		5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	ZDHHC9	Q9Y397	364 aa		5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	TCAF1	Q9Y4C2	921 aa		5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173		X6R8D5	127 aa		5.49	□□□□□ -1.53
CCNL1-223	ENST00000481173	MUSK	O15146	869 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	SELENOP	P49908	381 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	KRTAP1-1	Q07627	177 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	R3HDM1	Q15032	1099 aa	Known RBP	5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	TRMT10B	Q6PF06	316 aa	Known RBP	5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	TEPP	Q6URK8	271 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	TMC5	Q6UXY8	1006 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173		Q8N1Y9	231 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	RASGRP4	Q8TDF6	673 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	CPLX3	Q8WVH0	158 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	DIO2	Q92813	273 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	SHD	Q96IW2	340 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	MRGPRX3	Q96LB0	322 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	SPATA32	Q96LK8	384 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	RBPJL	Q9UBG7	517 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	FTSJ1	Q9UET6	329 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	COA3	Q9Y2R0	106 aa	Predicted RBP	5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	PCDHB4	Q9Y5E5	795 aa		5.48	□□□□□ -1.53
CCNL1-223	ENST00000481173	TCRBV5S2	A0A599	114 aa		5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	PATE3	B3GLJ2	98 aa		5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	HGS	O14964	777 aa	Predicted RBP	5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	TBX1	O43435	398 aa		5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	MYO1B	O43795	1136 aa		5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	ZNF623	O75123	536 aa		5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	LRG1	P02750	347 aa		5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	ECI1	P42126	302 aa		5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	PHF19	Q5T6S3	580 aa		5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	SLFN13	Q68D06	897 aa		5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	IQCE	Q6IPM2	695 aa		5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	FAM169B	Q8N8A8	192 aa		5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	MEGF9	Q9H1U4	602 aa		5.47	□□□□□ -1.53
CCNL1-223	ENST00000481173	GJA8	P48165	433 aa		5.46	□□□□□ -1.54
CCNL1-223	ENST00000481173	GTF2A2	P52657	109 aa		5.46	□□□□□ -1.54
CCNL1-223	ENST00000481173	CASP7	P55210	303 aa		5.46	□□□□□ -1.54
CCNL1-223	ENST00000481173	NFATC3	Q12968	1075 aa		5.46	□□□□□ -1.54
CCNL1-223	ENST00000481173	STEAP3	Q658P3	488 aa		5.46	□□□□□ -1.54
CCNL1-223	ENST00000481173	KLHL36	Q8N4N3	616 aa		5.46	□□□□□ -1.54
CCNL1-223	ENST00000481173	RCBTB1	Q8NDN9	531 aa		5.46	□□□□□ -1.54
CCNL1-223	ENST00000481173		Q8TCH9	128 aa		5.46	□□□□□ -1.54
CCNL1-223	ENST00000481173	CHAMP1	Q96JM3	812 aa		5.46	□□□□□ -1.54
CCNL1-223	ENST00000481173	ZNF341	Q9BYN7	854 aa		5.46	□□□□□ -1.54
CCNL1-223	ENST00000481173	MEFV	O15553	781 aa	Predicted RBP	5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	CYP7B1	O75881	506 aa		5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	SNRPB2	P08579	225 aa	Known RBP	5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	NAT2	P11245	290 aa		5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	LCP1	P13796	627 aa		5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	KCNAB2	Q13303	367 aa		5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	CHRNA2	Q15822	529 aa		5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	PRSS53	Q2L4Q9	553 aa		5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	E4F1	Q66K89	784 aa	Predicted RBP	5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	NUDT10	Q8NFP7	164 aa		5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	NUDT11	Q96G61	164 aa		5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	GNRHR2	Q96P88	292 aa		5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	TMEM209	Q96SK2	561 aa		5.45	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms