RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 SSPNQ14714 243 aa8.53□□□□□ -1.04
GTF3C3-211ENST00000481098 OTOP3Q7RTS5 596 aa8.53□□□□□ -1.04
GTF3C3-211ENST00000481098 TMEFF1Q8IYR6 380 aa8.53□□□□□ -1.04
GTF3C3-211ENST00000481098 PHOSPHO1Q8TCT1 267 aa8.53□□□□□ -1.04
GTF3C3-211ENST00000481098 JAM3Q9BX67 310 aa8.53□□□□□ -1.04
GTF3C3-211ENST00000481098 EPB41L4AQ9HCS5 686 aaPredicted RBP8.53□□□□□ -1.04
GTF3C3-211ENST00000481098 SLC6A20Q9NP91 592 aa8.53□□□□□ -1.04
GTF3C3-211ENST00000481098 SFMBT1Q9UHJ3 866 aa8.53□□□□□ -1.04
GTF3C3-211ENST00000481098 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 KRIT1O00522 736 aa8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 PLD2O14939 933 aa8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 ATF2P15336 505 aa8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 NCKAP1LP55160 1127 aa8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 MILR1Q7Z6M3 343 aa8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 B3GNT8Q7Z7M8 397 aa8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 NOP9Q86U38 636 aaKnown RBP8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 C1QL4Q86Z23 238 aa8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 PCDH19Q8TAB3 1148 aa8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 TOX2Q96NM4 488 aa8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 SMOC1Q9H4F8 434 aa8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 CNOT6Q9ULM6 557 aaKnown RBP8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 KCTD3Q9Y597 815 aa8.52□□□□□ -1.05
GTF3C3-211ENST00000481098 TCRBV5S2A0A599 114 aa8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 RFXAPO00287 272 aa8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 CACNB2Q08289 660 aaPredicted RBP8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 SPIRE1Q08AE8 756 aa8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 ETV3LQ6ZN32 361 aa8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 MTDHQ86UE4 582 aaKnown RBP8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 FAM129CQ86XR2 697 aa8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 FAM126BQ8IXS8 530 aa8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 SYNPOQ8N3V7 929 aa8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 SLC7A14Q8TBB6 771 aa8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 PIP4K2CQ8TBX8 421 aa8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 BCAS3Q9H6U6 928 aa8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 IPPKQ9H8X2 491 aa8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 PCDHA8Q9Y5H6 950 aa8.51□□□□□ -1.05
GTF3C3-211ENST00000481098 CRTAMO95727 393 aa8.5□□□□□ -1.05
GTF3C3-211ENST00000481098 CAP1Q01518 475 aa8.5□□□□□ -1.05
GTF3C3-211ENST00000481098 GUCY1A3Q02108 690 aa8.5□□□□□ -1.05
GTF3C3-211ENST00000481098 FNDC3BQ53EP0 1204 aaKnown RBP8.5□□□□□ -1.05
GTF3C3-211ENST00000481098 ZNF385BQ569K4 471 aa8.5□□□□□ -1.05
GTF3C3-211ENST00000481098 TTLL11Q8NHH1 800 aa8.5□□□□□ -1.05
GTF3C3-211ENST00000481098 UHMK1Q8TAS1 419 aaKnown RBP8.5□□□□□ -1.05
GTF3C3-211ENST00000481098 TRIM39Q9HCM9 518 aa8.5□□□□□ -1.05
GTF3C3-211ENST00000481098 MYOTQ9UBF9 498 aa8.5□□□□□ -1.05
GTF3C3-211ENST00000481098 NDOR1Q9UHB4 597 aa8.5□□□□□ -1.05
GTF3C3-211ENST00000481098 PCDHB4Q9Y5E5 795 aa8.5□□□□□ -1.05
GTF3C3-211ENST00000481098 GNAT1P11488 350 aa8.49□□□□□ -1.05
GTF3C3-211ENST00000481098 PI3P19957 117 aa8.49□□□□□ -1.05
GTF3C3-211ENST00000481098 CFPP27918 469 aa8.49□□□□□ -1.05
GTF3C3-211ENST00000481098 MC3RP41968 323 aa8.49□□□□□ -1.05
GTF3C3-211ENST00000481098 JAG1P78504 1218 aa8.49□□□□□ -1.05
GTF3C3-211ENST00000481098 DACT3Q96B18 629 aaPredicted RBP8.49□□□□□ -1.05
GTF3C3-211ENST00000481098 SCLYQ96I15 445 aa8.49□□□□□ -1.05
GTF3C3-211ENST00000481098 PCDH18Q9HCL0 1135 aa8.49□□□□□ -1.05
GTF3C3-211ENST00000481098 HSPBP1Q9NZL4 362 aa8.49□□□□□ -1.05
GTF3C3-211ENST00000481098 ASH2LQ9UBL3 628 aa8.49□□□□□ -1.05
GTF3C3-211ENST00000481098 C8BP07358 591 aa8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 HTRA3P83110 453 aa8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 FOXO4P98177 505 aa8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 KRTAP19-4Q3LI73 84 aa8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 BRAPQ7Z569 592 aa8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 JAZF1Q86VZ6 243 aa8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 TRIM48Q8IWZ4 208 aa8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 LRRC56Q8IYG6 542 aaPredicted RBP8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 ARRDC4Q8NCT1 418 aa8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 KCNJ15Q99712 375 aa8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 NGRNQ9NPE2 291 aaKnown RBP8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 NUB1Q9Y5A7 615 aa8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 PCDHA9Q9Y5H5 950 aa8.48□□□□□ -1.05
GTF3C3-211ENST00000481098 TCRBV16S1A1N1A0A5B0 115 aa8.47□□□□□ -1.05
GTF3C3-211ENST00000481098 ESYT3A0FGR9 886 aa8.47□□□□□ -1.05
GTF3C3-211ENST00000481098 RFPL3O75679 317 aa8.47□□□□□ -1.05
GTF3C3-211ENST00000481098 EPHA5P54756 1037 aa8.47□□□□□ -1.05
GTF3C3-211ENST00000481098 CIAPIN1Q6FI81 312 aa8.47□□□□□ -1.05
GTF3C3-211ENST00000481098 CNKSR3Q6P9H4 555 aa8.47□□□□□ -1.05
GTF3C3-211ENST00000481098 C16orf59Q7L2K0 433 aa8.47□□□□□ -1.05
GTF3C3-211ENST00000481098 HOMER1Q86YM7 354 aa8.47□□□□□ -1.05
GTF3C3-211ENST00000481098 PANK1Q8TE04 598 aa8.47□□□□□ -1.05
GTF3C3-211ENST00000481098 FBXW5Q969U6 566 aa8.47□□□□□ -1.05
GTF3C3-211ENST00000481098 MAGEB10Q96LZ2 347 aaPredicted RBP8.47□□□□□ -1.05
GTF3C3-211ENST00000481098 FAN1Q9Y2M0 1017 aa8.47□□□□□ -1.05
GTF3C3-211ENST00000481098 NKRFO15226 690 aaKnown RBP eCLIP8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 NUAK1O60285 661 aa8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 RASGRP1O95267 797 aa8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 LIMS1P48059 325 aa8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 ZC3H18Q86VM9 953 aaKnown RBP8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 TMEM151BQ8IW70 566 aa8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 NLGN1Q8N2Q7 840 aa8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 SMARCC2Q8TAQ2 1214 aa8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 ZSCAN18Q8TBC5 510 aaPredicted RBP8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 CLUHP3Q96NS8 147 aa8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 DTLQ9NZJ0 730 aa8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 TBX22Q9Y458 520 aa8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 MRPL42Q9Y6G3 142 aaKnown RBP8.46□□□□□ -1.06
GTF3C3-211ENST00000481098 PPP1R12AO14974 1030 aaPredicted RBP8.45□□□□□ -1.06
GTF3C3-211ENST00000481098 GSTA4O15217 222 aa8.45□□□□□ -1.06
GTF3C3-211ENST00000481098 RAPGEF3O95398 923 aa8.45□□□□□ -1.06
GTF3C3-211ENST00000481098 CYP2C8P10632 490 aa8.45□□□□□ -1.06
GTF3C3-211ENST00000481098 COL6A2P12110 1019 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms