RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 PPP1R16BQ96T49 567 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 KLHL25Q9H0H3 589 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 NUP62CLQ9H1M0 184 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 CXorf56Q9H5V9 222 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 PPP1R9AQ9ULJ8 1098 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 TMCC3Q9ULS5 477 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 TSPY2A6NKD2 308 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 TUSC2O75896 110 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 ZIC2O95409 532 aaPredicted RBP9.39□□□□□ -0.91
LSM5-210ENST00000480956 DHRS4L1P0CG22 281 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 TSPY3P0CV98 308 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 TSPY8P0CW00 308 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 KCNA6P17658 529 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 PSMA3P25788 255 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 TSPY1Q01534 308 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 PDE4BQ07343 736 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 CCINQ13939 588 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 CCDC30Q5VVM6 783 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 MAP4K3Q8IVH8 894 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 AFAP1L1Q8TED9 768 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 ZSCAN31Q96LW9 406 aaPredicted RBP9.39□□□□□ -0.91
LSM5-210ENST00000480956 SLC6A18Q96N87 628 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 CHCHD6Q9BRQ6 235 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 ZCCHC17Q9NP64 241 aaKnown RBP9.39□□□□□ -0.91
LSM5-210ENST00000480956 ABCF2Q9UG63 623 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 PCDHA4Q9UN74 947 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 SNCAIPQ9Y6H5 919 aa9.39□□□□□ -0.91
LSM5-210ENST00000480956 GOLGA6L6A8MZA4 724 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 AQP7O14520 342 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 PPFIA3O75145 1194 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 ARIH2O95376 493 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 CYP11A1P05108 521 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 SELPP16109 830 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 CACNB3P54284 484 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 SNX16P57768 344 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 PCDH1Q08174 1060 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 CACNB2Q08289 660 aaPredicted RBP9.38□□□□□ -0.91
LSM5-210ENST00000480956 TMEM201Q5SNT2 666 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 GJC2Q5T442 439 aaPredicted RBP9.38□□□□□ -0.91
LSM5-210ENST00000480956 HIBCHQ6NVY1 386 aaPredicted RBP9.38□□□□□ -0.91
LSM5-210ENST00000480956 ZNF513Q8N8E2 541 aaPredicted RBP9.38□□□□□ -0.91
LSM5-210ENST00000480956 IGSF22Q8N9C0 903 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 ARL8AQ96BM9 186 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 TRIT1Q9H3H1 467 aaKnown RBP9.38□□□□□ -0.91
LSM5-210ENST00000480956 BRD9Q9H8M2 597 aa9.38□□□□□ -0.91
LSM5-210ENST00000480956 WDR64B1ANS9 1081 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 B4E171 279 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 ATP2A2P16615 1042 aaKnown RBP9.37□□□□□ -0.91
LSM5-210ENST00000480956 CAP2P40123 477 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 PIK3CBP42338 1070 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 CLNS1AP54105 237 aaKnown RBP9.37□□□□□ -0.91
LSM5-210ENST00000480956 PLIN5Q00G26 463 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 GUCY1A3Q02108 690 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 PSMD6Q15008 389 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 IZUMO3Q5VZ72 239 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 TRIM46Q7Z4K8 759 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 ARL10Q8N8L6 244 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 PCYOX1LQ8NBM8 494 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 FLCNQ8NFG4 579 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 GBP3Q9H0R5 595 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 DMRT3Q9NQL9 472 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 ITM2CQ9NQX7 267 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 CYP26B1Q9NR63 512 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 VPS45Q9NRW7 570 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 SYNPO2Q9UMS6 1093 aa9.37□□□□□ -0.91
LSM5-210ENST00000480956 A0A1W2PNR3 127 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 TRAF5O00463 557 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 POU2F2P09086 479 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 BMP1P13497 986 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 RAC2P15153 192 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 NAT1P18440 290 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 XPAP23025 273 aaPredicted RBP9.36□□□□□ -0.91
LSM5-210ENST00000480956 ZNF131P52739 623 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 NAP1L1P55209 391 aaKnown RBP9.36□□□□□ -0.91
LSM5-210ENST00000480956 PLAURQ03405 335 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 MAP4K2Q12851 820 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 MFSD4BQ5TF39 518 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 RNF220Q5VTB9 566 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 LCA5Q86VQ0 697 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 CMIPQ8IY22 773 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 PLPPR2Q96GM1 343 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 MRGPRX3Q96LB0 322 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 ZCCHC2Q9C0B9 1178 aaKnown RBP9.36□□□□□ -0.91
LSM5-210ENST00000480956 UBN1Q9NPG3 1134 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 TLR7Q9NYK1 1049 aaKnown RBP9.36□□□□□ -0.91
LSM5-210ENST00000480956 B4GALT6Q9UBX8 382 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 MAGED2Q9UNF1 606 aaPredicted RBP9.36□□□□□ -0.91
LSM5-210ENST00000480956 CHURC1-FNTBB4DL54 471 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 H3BML4 177 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 CLGNO14967 610 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 AXIN1O15169 862 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 CAPN5O15484 640 aaPredicted RBP9.36□□□□□ -0.91
LSM5-210ENST00000480956 PPM1BO75688 479 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 SLITRK5O94991 958 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 IGHDP01880 384 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 CSTBP04080 98 aaKnown RBP9.36□□□□□ -0.91
LSM5-210ENST00000480956 MAPK10P53779 464 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 SLC10A5Q5PT55 438 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 BROXQ5VW32 411 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 PGBD2Q6P3X8 592 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms