RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 SERTAD1Q9UHV2 236 aa11.78□□□□□ -0.52
LINC00173-203ENST00000480237 ZNF214Q9UL59 606 aaPredicted RBP11.78□□□□□ -0.52
LINC00173-203ENST00000480237 ADAMTS5Q9UNA0 930 aa11.78□□□□□ -0.52
LINC00173-203ENST00000480237 A0A087X0B3 334 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 UNCXA6NJT0 531 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 PP2D1A8MPX8 630 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 PPP1R3GB7ZBB8 358 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 EDIL3O43854 480 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 PABPC4Q13310 644 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC00173-203ENST00000480237 SNAPC2Q13487 334 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 TMEM132BQ14DG7 1078 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 STX1AQ16623 288 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 PRR16Q569H4 304 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 KANK3Q6NY19 840 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 NSMFQ6X4W1 530 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 FASTKD5Q7L8L6 764 aaKnown RBP11.77□□□□□ -0.53
LINC00173-203ENST00000480237 GPIHBP1Q8IV16 184 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 RNF214Q8ND24 703 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 CRYGNQ8WXF5 182 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 MTMR9Q96QG7 549 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 KRTAP3-3Q9BYR6 98 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 KRTAP3-2Q9BYR7 98 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 AGTPBP1Q9UPW5 1226 aa11.77□□□□□ -0.53
LINC00173-203ENST00000480237 CYP3A7-CYP3A51PA0A087WV96 503 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 ACTN4O43707 911 aaKnown RBP11.76□□□□□ -0.53
LINC00173-203ENST00000480237 CYP3A4P08684 503 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 CYP3A7P24462 503 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 HOXA7P31268 230 aaPredicted RBP11.76□□□□□ -0.53
LINC00173-203ENST00000480237 STAT6P42226 847 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 UBXN2AP68543 259 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 GHRHRQ02643 423 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 PNOCQ13519 176 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 TKFCQ3LXA3 575 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 SLC30A10Q6XR72 485 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 RNF207Q6ZRF8 634 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 CABP7Q86V35 215 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 SLFN12Q8IYM2 578 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 SAMD3Q8N6K7 520 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 MB21D1Q8N884 522 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 IQUBQ8NA54 791 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 ERCC4Q92889 916 aaPredicted RBP11.76□□□□□ -0.53
LINC00173-203ENST00000480237 MBOAT7Q96N66 472 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 RBSNQ9H1K0 784 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 ACAD9Q9H845 621 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 TTC12Q9H892 705 aaPredicted RBP11.76□□□□□ -0.53
LINC00173-203ENST00000480237 DISC1Q9NRI5 854 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 MAP3K20Q9NYL2 800 aaKnown RBP11.76□□□□□ -0.53
LINC00173-203ENST00000480237 KIAA1468Q9P260 1216 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 CCDC39Q9UFE4 941 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 RABGAP1Q9Y3P9 1069 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
LINC00173-203ENST00000480237 ATP2A1O14983 1001 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 SLFN14P0C7P3 912 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 CDC25AP30304 524 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 CIITAP33076 1130 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 GJA5P36382 358 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 RPS6P62753 249 aaKnown RBP11.75□□□□□ -0.53
LINC00173-203ENST00000480237 KARSQ15046 597 aaKnown RBP11.75□□□□□ -0.53
LINC00173-203ENST00000480237 POSTNQ15063 836 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 Q4G0T1 1027 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 ANO6Q4KMQ2 910 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 IGSF22Q8N9C0 903 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 CALML4Q96GE6 196 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 CDK5RAP3Q96JB5 506 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 CCSER1Q9C0I3 900 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 ASCC2Q9H1I8 757 aaPredicted RBP11.75□□□□□ -0.53
LINC00173-203ENST00000480237 COL20A1Q9P218 1284 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 LRWD1Q9UFC0 647 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 RIPK3Q9Y572 518 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 CASP8AP2Q9UKL3 1982 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 FRMPD4Q14CM0 1322 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 RPTORQ8N122 1335 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 FAM86B1E9PN63 330 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 TBX3O15119 743 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 FAM86B2P0C5J1 330 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 STAT3P40763 770 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 HERVK_113P62684 666 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 LSM11P83369 360 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00173-203ENST00000480237 SETQ01105 290 aaPredicted RBP11.75□□□□□ -0.53
LINC00173-203ENST00000480237 RRAGBQ5VZM2 374 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 GRAMD1CQ8IYS0 662 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 SYTL5Q8TDW5 730 aaPredicted RBP11.75□□□□□ -0.53
LINC00173-203ENST00000480237 UIMC1Q96RL1 719 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 PAGR1Q9BTK6 254 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 KCNMB3Q9NPA1 279 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 NPDC1Q9NQX5 325 aaPredicted RBP11.75□□□□□ -0.53
LINC00173-203ENST00000480237 ANO10Q9NW15 660 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 PNMA3Q9UL41 463 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 PCDHA12Q9UN75 941 aa11.75□□□□□ -0.53
LINC00173-203ENST00000480237 BIN1O00499 593 aa11.74□□□□□ -0.53
LINC00173-203ENST00000480237 FOXN1O15353 648 aa11.74□□□□□ -0.53
LINC00173-203ENST00000480237 PLCG1P19174 1290 aa11.74□□□□□ -0.53
LINC00173-203ENST00000480237 AFMP43652 599 aa11.74□□□□□ -0.53
LINC00173-203ENST00000480237 LBX2Q6XYB7 198 aa11.74□□□□□ -0.53
LINC00173-203ENST00000480237 PLA2G4DQ86XP0 818 aa11.74□□□□□ -0.53
LINC00173-203ENST00000480237 ELOA2Q8IYF1 753 aaPredicted RBP11.74□□□□□ -0.53
LINC00173-203ENST00000480237 ETNPPLQ8TBG4 499 aa11.74□□□□□ -0.53
LINC00173-203ENST00000480237 SNX29Q8TEQ0 813 aa11.74□□□□□ -0.53
LINC00173-203ENST00000480237 HAS1Q92839 578 aa11.74□□□□□ -0.53
LINC00173-203ENST00000480237 SMARCE1Q969G3 411 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms