RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 FOXD4L3Q6VB84 417 aaPredicted RBP12.7□□□□□ -0.38
CLDN11-205ENST00000480067 PLA2G4DQ86XP0 818 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 GPRASP2Q96D09 838 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 KATNBL1Q9H079 304 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 PDGFCQ9NRA1 345 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 KCNH7Q9NS40 1196 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 CHMP5Q9NZZ3 219 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 FAM184BQ9ULE4 1060 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 ZDHHC9Q9Y397 364 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 MRVI1Q9Y6F6 885 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 SPATA31C2B4DYI2 1134 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 TXNP10599 105 aaKnown RBP12.69□□□□□ -0.38
CLDN11-205ENST00000480067 MAP3K21Q5TCX8 1036 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 FAM173BQ6P4H8 233 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 IGLV3-22A0A075B6J6 115 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 NEMFO60524 1076 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 ARP10275 920 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 CYBAP13498 195 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 ICAM3P32942 547 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 ADCYAP1R1P41586 468 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 TNFAIP2Q03169 654 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 ORC2Q13416 577 aaPredicted RBP12.69□□□□□ -0.38
CLDN11-205ENST00000480067 NBR1Q14596 966 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 TRPV1Q8NER1 839 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 MBOAT7Q96N66 472 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 ZNF396Q96N95 335 aaPredicted RBP12.69□□□□□ -0.38
CLDN11-205ENST00000480067 ZNF577Q9BSK1 485 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 HMX1Q9NP08 348 aaPredicted RBP12.69□□□□□ -0.38
CLDN11-205ENST00000480067 PCDHB6Q9Y5E3 794 aa12.69□□□□□ -0.38
CLDN11-205ENST00000480067 RBM47A0AV96 593 aaKnown RBP12.68□□□□□ -0.38
CLDN11-205ENST00000480067 IPO5O00410 1097 aaKnown RBP12.68□□□□□ -0.38
CLDN11-205ENST00000480067 WNT7AO00755 349 aa12.68□□□□□ -0.38
CLDN11-205ENST00000480067 SEPT4O43236 478 aa12.68□□□□□ -0.38
CLDN11-205ENST00000480067 SLC37A4O43826 429 aa12.68□□□□□ -0.38
CLDN11-205ENST00000480067 BAG4O95429 457 aaKnown RBP12.68□□□□□ -0.38
CLDN11-205ENST00000480067 MYCP01106 439 aaPredicted RBP12.68□□□□□ -0.38
CLDN11-205ENST00000480067 AKR1A1P14550 325 aa12.68□□□□□ -0.38
CLDN11-205ENST00000480067 CCND3P30281 292 aaPredicted RBP12.68□□□□□ -0.38
CLDN11-205ENST00000480067 CALCRLQ16602 461 aa12.68□□□□□ -0.38
CLDN11-205ENST00000480067 LY6KQ17RY6 165 aa12.68□□□□□ -0.38
CLDN11-205ENST00000480067 CCDC62Q6P9F0 684 aa12.68□□□□□ -0.38
CLDN11-205ENST00000480067 GIMAP8Q8ND71 665 aaPredicted RBP12.68□□□□□ -0.38
CLDN11-205ENST00000480067 LENG9Q96B70 501 aa12.68□□□□□ -0.38
CLDN11-205ENST00000480067 UIMC1Q96RL1 719 aa12.68□□□□□ -0.38
CLDN11-205ENST00000480067 SENP7Q9BQF6 1050 aa12.68□□□□□ -0.38
CLDN11-205ENST00000480067 AGO4Q9HCK5 861 aaKnown RBP12.68□□□□□ -0.38
CLDN11-205ENST00000480067 PKD2L1Q9P0L9 805 aa12.68□□□□□ -0.38
CLDN11-205ENST00000480067 DDX41Q9UJV9 622 aaKnown RBP12.68□□□□□ -0.38
CLDN11-205ENST00000480067 CEP131Q9UPN4 1083 aa12.68□□□□□ -0.38
CLDN11-205ENST00000480067 PLXNA1Q9UIW2 1896 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 LCTP09848 1927 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 MSH4O15457 936 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 ATP9AO75110 1047 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 ARIH2O95376 493 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 SMPD1P17405 629 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 SP2Q02086 613 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
CLDN11-205ENST00000480067 PTGDRQ13258 359 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 SEMA3FQ13275 785 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 NEDD9Q14511 834 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 DUSP28Q4G0W2 176 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 ATL3Q6DD88 541 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 FAM20AQ96MK3 541 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 SDF4Q9BRK5 362 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 MCOLN1Q9GZU1 580 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 MLXIPQ9HAP2 919 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.67□□□□□ -0.38
CLDN11-205ENST00000480067 TFIP11Q9UBB9 837 aaKnown RBP12.67□□□□□ -0.38
CLDN11-205ENST00000480067 CFAP45Q9UL16 551 aa12.67□□□□□ -0.38
CLDN11-205ENST00000480067 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-205ENST00000480067 TBX3O15119 743 aa12.66□□□□□ -0.38
CLDN11-205ENST00000480067 NKRFO15226 690 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLDN11-205ENST00000480067 MSCO60682 206 aa12.66□□□□□ -0.38
CLDN11-205ENST00000480067 BMP15O95972 392 aa12.66□□□□□ -0.38
CLDN11-205ENST00000480067 RARBP10826 455 aa12.66□□□□□ -0.38
CLDN11-205ENST00000480067 DNM1Q05193 864 aaKnown RBP12.66□□□□□ -0.38
CLDN11-205ENST00000480067 SF3A1Q15459 793 aaKnown RBP12.66□□□□□ -0.38
CLDN11-205ENST00000480067 ANO1Q5XXA6 986 aa12.66□□□□□ -0.38
CLDN11-205ENST00000480067 DHX37Q8IY37 1157 aaKnown RBP12.66□□□□□ -0.38
CLDN11-205ENST00000480067 SLFN12Q8IYM2 578 aa12.66□□□□□ -0.38
CLDN11-205ENST00000480067 ETNPPLQ8TBG4 499 aa12.66□□□□□ -0.38
CLDN11-205ENST00000480067 RNF208Q9H0X6 261 aa12.66□□□□□ -0.38
CLDN11-205ENST00000480067 KCNMB3Q9NPA1 279 aa12.66□□□□□ -0.38
CLDN11-205ENST00000480067 TBC1D22BQ9NU19 505 aa12.66□□□□□ -0.38
CLDN11-205ENST00000480067 CLIC4Q9Y696 253 aa12.66□□□□□ -0.38
CLDN11-205ENST00000480067 LAD1O00515 517 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 DYNC1LI2O43237 492 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-205ENST00000480067 GAS7O60861 476 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 DUSP11O75319 330 aaKnown RBP12.65□□□□□ -0.38
CLDN11-205ENST00000480067 GGPS1O95749 300 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 OR52Z1P0C646 297 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 CCL5P13501 91 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 KCNA2P16389 499 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 NCLP19338 710 aaKnown RBP12.65□□□□□ -0.38
CLDN11-205ENST00000480067 UBA1P22314 1058 aaKnown RBP12.65□□□□□ -0.38
CLDN11-205ENST00000480067 TXKP42681 527 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 C1QBPQ07021 282 aaKnown RBP12.65□□□□□ -0.38
CLDN11-205ENST00000480067 LAMC2Q13753 1193 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 CELF3Q5SZQ8 465 aaKnown RBP12.65□□□□□ -0.38
CLDN11-205ENST00000480067 TMEM63BQ5T3F8 832 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms