RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 C16orf86Q6ZW13 317 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 DPH6Q7L8W6 267 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 TBC1D10CQ8IV04 446 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 CD99L2Q8TCZ2 262 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 UIMC1Q96RL1 719 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 KIAA1683Q9H0B3 1180 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 LY9Q9HBG7 655 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.6□□□□□ -1.35
CPS1-207ENST00000479988 PARP2Q9UGN5 583 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 ANAPC4Q9UJX5 808 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 UNCXA6NJT0 531 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 NOP2P46087 812 aaKnown RBP6.6□□□□□ -1.35
CPS1-207ENST00000479988 MTIF2P46199 727 aaKnown RBP6.6□□□□□ -1.35
CPS1-207ENST00000479988 LBX1P52954 281 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 KRT76Q01546 638 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 CACNA2D4Q7Z3S7 1137 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 IGDCC4Q8TDY8 1250 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 TCP11Q8WWU5 503 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 CEP170P1Q96L14 293 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 SPATC1LQ9H0A9 340 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 TBC1D22BQ9NU19 505 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 CEP83Q9Y592 693 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 CLIC4Q9Y696 253 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 TAF6LQ9Y6J9 622 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 SPEF2Q9C093 1822 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 NHSL1Q5SYE7 1610 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 GPR25O00155 361 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 RPLP2P05387 115 aaKnown RBP6.6□□□□□ -1.35
CPS1-207ENST00000479988 JAK3P52333 1124 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 ELOA2Q8IYF1 753 aaPredicted RBP6.6□□□□□ -1.35
CPS1-207ENST00000479988 FMR1NBQ8N0W7 255 aaPredicted RBP6.6□□□□□ -1.35
CPS1-207ENST00000479988 VGLL2Q8N8G2 317 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 GCNAQ96QF7 691 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 MMRN2Q9H8L6 949 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 XPNPEP3Q9NQH7 507 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 MSRAQ9UJ68 235 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 MARF1Q9Y4F3 1742 aaKnown RBP6.59□□□□□ -1.35
CPS1-207ENST00000479988 PSMA7O14818 248 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 VCAM1P19320 739 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 NDUFA8P51970 172 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 DMP1Q13316 513 aaPredicted RBP6.59□□□□□ -1.35
CPS1-207ENST00000479988 QRICH1Q2TAL8 776 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 IER5Q5VY09 327 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 TWF2Q6IBS0 349 aaKnown RBP6.59□□□□□ -1.35
CPS1-207ENST00000479988 KRBA2Q6ZNG9 492 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 DEFB118Q96PH6 123 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 PIDD1Q9HB75 910 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 AAASQ9NRG9 546 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 BTBD18B2RXH4 712 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 CTDNEP1O95476 244 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 HMGCRP04035 888 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 P4HA1P13674 534 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 PTPRAP18433 802 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 HOXA7P31268 230 aaPredicted RBP6.59□□□□□ -1.35
CPS1-207ENST00000479988 LIG4P49917 911 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 ERVK-9P63128 1117 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 ERVK-24P63145 666 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 ST3GAL1Q11201 340 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 DGKDQ16760 1214 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 MTERF2Q49AM1 385 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 CYB5R4Q7L1T6 521 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 ANKRD23Q86SG2 305 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 RPUSD2Q8IZ73 545 aaKnown RBP6.59□□□□□ -1.35
CPS1-207ENST00000479988 MYCT1Q8N699 235 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 ZNF830Q96NB3 372 aaPredicted RBP6.59□□□□□ -1.35
CPS1-207ENST00000479988 ANO3Q9BYT9 981 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 FRMD4BQ9Y2L6 1034 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.59□□□□□ -1.35
CPS1-207ENST00000479988 PKD1L3Q7Z443 1732 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 DDTLA6NHG4 134 aaPredicted RBP6.59□□□□□ -1.35
CPS1-207ENST00000479988 PQBP1O60828 265 aaKnown RBP6.59□□□□□ -1.35
CPS1-207ENST00000479988 CCDC172P0C7W6 258 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 U2AF2P26368 475 aaKnown RBP eCLIP6.59□□□□□ -1.35
CPS1-207ENST00000479988 SEMA3FQ13275 785 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 LAMC2Q13753 1193 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 POSTNQ15063 836 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 INF2Q27J81 1249 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 SLFNL1Q499Z3 407 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 CMTR1Q8N1G2 835 aaKnown RBP6.59□□□□□ -1.35
CPS1-207ENST00000479988 ZNF397Q8NF99 534 aaPredicted RBP6.59□□□□□ -1.35
CPS1-207ENST00000479988 FAM163AQ96GL9 167 aaPredicted RBP6.59□□□□□ -1.35
CPS1-207ENST00000479988 SRRTQ9BXP5 876 aaKnown RBP6.59□□□□□ -1.35
CPS1-207ENST00000479988 IFNKQ9P0W0 207 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 ADAMTS7Q9UKP4 1686 aa6.59□□□□□ -1.35
CPS1-207ENST00000479988 WDR64B1ANS9 1081 aa6.59□□□□□ -1.36
CPS1-207ENST00000479988 GGPS1O95749 300 aa6.59□□□□□ -1.36
CPS1-207ENST00000479988 ABCD1P33897 745 aa6.59□□□□□ -1.36
CPS1-207ENST00000479988 ANTXR2P58335 489 aa6.59□□□□□ -1.36
CPS1-207ENST00000479988 TUBB4BP68371 445 aa6.59□□□□□ -1.36
CPS1-207ENST00000479988 CDC42EP1Q00587 391 aa6.59□□□□□ -1.36
CPS1-207ENST00000479988 FANCCQ00597 558 aa6.59□□□□□ -1.36
CPS1-207ENST00000479988 WDR44Q5JSH3 913 aa6.59□□□□□ -1.36
CPS1-207ENST00000479988 CEP135Q66GS9 1140 aa6.59□□□□□ -1.36
CPS1-207ENST00000479988 MYRIPQ8NFW9 859 aa6.59□□□□□ -1.36
CPS1-207ENST00000479988 KIAA1524Q8TCG1 905 aa6.59□□□□□ -1.36
CPS1-207ENST00000479988 FUCA2Q9BTY2 467 aa6.59□□□□□ -1.36
CPS1-207ENST00000479988 SRPRBQ9Y5M8 271 aaKnown RBP6.59□□□□□ -1.36
CPS1-207ENST00000479988 KCPQ6ZWJ8 1503 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 CICQ96RK0 1608 aaPredicted RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 SLC15A5A6NIM6 579 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms