RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 DCAF4Q8WV16 495 aa8.04□□□□□ -1.12
COMMD3-212ENST00000479958 IPO9Q96P70 1041 aaKnown RBP8.04□□□□□ -1.12
COMMD3-212ENST00000479958 SIRPGQ9P1W8 387 aa8.04□□□□□ -1.12
COMMD3-212ENST00000479958 FFAR3O14843 346 aa8.03□□□□□ -1.12
COMMD3-212ENST00000479958 PDPK1O15530 556 aa8.03□□□□□ -1.12
COMMD3-212ENST00000479958 IFRD2Q12894 506 aaPredicted RBP8.03□□□□□ -1.12
COMMD3-212ENST00000479958 CD300LDQ6UXZ3 194 aa8.03□□□□□ -1.12
COMMD3-212ENST00000479958 SAPCD2Q86UD0 394 aa8.03□□□□□ -1.12
COMMD3-212ENST00000479958 ARMC5Q96C12 935 aa8.03□□□□□ -1.12
COMMD3-212ENST00000479958 CCDC113Q9H0I3 377 aa8.03□□□□□ -1.12
COMMD3-212ENST00000479958 EPB41L1Q9H4G0 881 aa8.03□□□□□ -1.12
COMMD3-212ENST00000479958 URB2Q14146 1524 aaKnown RBP8.03□□□□□ -1.12
COMMD3-212ENST00000479958 SMARCA5O60264 1052 aaPredicted RBP8.03□□□□□ -1.12
COMMD3-212ENST00000479958 PLA2G1BP04054 148 aaKnown RBP8.03□□□□□ -1.12
COMMD3-212ENST00000479958 PABPC1P11940 636 aaKnown RBP8.03□□□□□ -1.12
COMMD3-212ENST00000479958 HTRA3P83110 453 aa8.03□□□□□ -1.12
COMMD3-212ENST00000479958 STEAP3Q658P3 488 aa8.03□□□□□ -1.12
COMMD3-212ENST00000479958 NLRP10Q86W26 655 aa8.03□□□□□ -1.12
COMMD3-212ENST00000479958 SPATA9Q9BWV2 254 aa8.03□□□□□ -1.12
COMMD3-212ENST00000479958 KIF21AQ7Z4S6 1674 aa8.02□□□□□ -1.13
COMMD3-212ENST00000479958 FGD5Q6ZNL6 1462 aa8.02□□□□□ -1.13
COMMD3-212ENST00000479958 TOPBP1Q92547 1522 aa8.02□□□□□ -1.13
COMMD3-212ENST00000479958 SH3D21A4FU49 640 aa8.02□□□□□ -1.13
COMMD3-212ENST00000479958 KRIT1O00522 736 aa8.02□□□□□ -1.13
COMMD3-212ENST00000479958 SOGA3Q5TF21 947 aa8.02□□□□□ -1.13
COMMD3-212ENST00000479958 MIB1Q86YT6 1006 aa8.02□□□□□ -1.13
COMMD3-212ENST00000479958 TP53I13Q8NBR0 393 aaPredicted RBP8.02□□□□□ -1.13
COMMD3-212ENST00000479958 ZBTB8AQ96BR9 441 aa8.02□□□□□ -1.13
COMMD3-212ENST00000479958 ZFYVE21Q9BQ24 234 aa8.02□□□□□ -1.13
COMMD3-212ENST00000479958 PHF20Q9BVI0 1012 aa8.02□□□□□ -1.13
COMMD3-212ENST00000479958 ARHGEF4Q9NR80 690 aa8.02□□□□□ -1.13
COMMD3-212ENST00000479958 ZNF652Q9Y2D9 606 aa8.02□□□□□ -1.13
COMMD3-212ENST00000479958 PDS5BQ9NTI5 1447 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 CEP164Q9UPV0 1460 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 RAD54L2Q9Y4B4 1467 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 SLURP1P55000 103 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 NKX3-2P78367 333 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 RASGRF1Q13972 1273 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 MTERF2Q49AM1 385 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 VWA3BQ502W6 1294 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 ERICH6BQ5W0A0 696 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 FAM126BQ8IXS8 530 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 RELTQ969Z4 430 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 NTMQ9P121 344 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 MSRB2Q9Y3D2 182 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 NUB1Q9Y5A7 615 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 EEA1Q15075 1411 aa8.01□□□□□ -1.13
COMMD3-212ENST00000479958 CCDC85CA6NKD9 419 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 LIPIQ6XZB0 460 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 SCUBE1Q8IWY4 988 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 PHOSPHO1Q8TCT1 267 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 ZNF526Q8TF50 670 aaPredicted RBP8□□□□□ -1.13
COMMD3-212ENST00000479958 OSBP2Q969R2 916 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 NOX5Q96PH1 765 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 CDC6Q99741 560 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 KRTAP4-9Q9BYQ8 210 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 XYLT2Q9H1B5 865 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 SMOC1Q9H4F8 434 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 FBXL7Q9UJT9 491 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 PCDHB4Q9Y5E5 795 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 DNMBPQ6XZF7 1577 aa8□□□□□ -1.13
COMMD3-212ENST00000479958 OTOL1A6NHN0 477 aaPredicted RBP7.99□□□□□ -1.13
COMMD3-212ENST00000479958 TADA3O75528 432 aa7.99□□□□□ -1.13
COMMD3-212ENST00000479958 C8BP07358 591 aa7.99□□□□□ -1.13
COMMD3-212ENST00000479958 SARSP49591 514 aaKnown RBP7.99□□□□□ -1.13
COMMD3-212ENST00000479958 RBL2Q08999 1139 aa7.99□□□□□ -1.13
COMMD3-212ENST00000479958 EMC4Q5J8M3 183 aa7.99□□□□□ -1.13
COMMD3-212ENST00000479958 TRIM48Q8IWZ4 208 aa7.99□□□□□ -1.13
COMMD3-212ENST00000479958 IFNL3Q8IZI9 196 aa7.99□□□□□ -1.13
COMMD3-212ENST00000479958 ZDHHC14Q8IZN3 488 aa7.99□□□□□ -1.13
COMMD3-212ENST00000479958 TTLL6Q8N841 843 aa7.99□□□□□ -1.13
COMMD3-212ENST00000479958 LINC00482Q8N8I6 264 aa7.99□□□□□ -1.13
COMMD3-212ENST00000479958 KYQ8NBH2 561 aa7.99□□□□□ -1.13
COMMD3-212ENST00000479958 FEZF2Q8TBJ5 459 aa7.99□□□□□ -1.13
COMMD3-212ENST00000479958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.99□□□□□ -1.13
COMMD3-212ENST00000479958 TOE1Q96GM8 510 aaKnown RBP7.99□□□□□ -1.13
COMMD3-212ENST00000479958 C11orf84Q9BUA3 381 aaPredicted RBP7.99□□□□□ -1.13
COMMD3-212ENST00000479958 CUX2O14529 1486 aa7.98□□□□□ -1.13
COMMD3-212ENST00000479958 SSRP1Q08945 709 aaKnown RBP7.98□□□□□ -1.13
COMMD3-212ENST00000479958 NFIXQ14938 502 aa7.98□□□□□ -1.13
COMMD3-212ENST00000479958 SF3A1Q15459 793 aaKnown RBP7.98□□□□□ -1.13
COMMD3-212ENST00000479958 KIZQ2M2Z5 673 aa7.98□□□□□ -1.13
COMMD3-212ENST00000479958 CYP4F22Q6NT55 531 aa7.98□□□□□ -1.13
COMMD3-212ENST00000479958 LRP10Q7Z4F1 713 aa7.98□□□□□ -1.13
COMMD3-212ENST00000479958 CARFQ8N187 725 aa7.98□□□□□ -1.13
COMMD3-212ENST00000479958 C20orf173Q96LM9 149 aa7.98□□□□□ -1.13
COMMD3-212ENST00000479958 POLA1P09884 1462 aaPredicted RBP7.97□□□□□ -1.13
COMMD3-212ENST00000479958 GPR85P60893 370 aa7.97□□□□□ -1.13
COMMD3-212ENST00000479958 SPIRE1Q08AE8 756 aa7.97□□□□□ -1.13
COMMD3-212ENST00000479958 SMAD4Q13485 552 aaKnown RBP7.97□□□□□ -1.13
COMMD3-212ENST00000479958 LBX2Q6XYB7 198 aa7.97□□□□□ -1.13
COMMD3-212ENST00000479958 SPATC1Q76KD6 591 aa7.97□□□□□ -1.13
COMMD3-212ENST00000479958 ADGRG2Q8IZP9 1017 aa7.97□□□□□ -1.13
COMMD3-212ENST00000479958 GORASP1Q9BQQ3 440 aa7.97□□□□□ -1.13
COMMD3-212ENST00000479958 JAM3Q9BX67 310 aa7.97□□□□□ -1.13
COMMD3-212ENST00000479958 SLC6A20Q9NP91 592 aa7.97□□□□□ -1.13
COMMD3-212ENST00000479958 USP40Q9NVE5 1235 aa7.97□□□□□ -1.13
COMMD3-212ENST00000479958 RAPGEF2Q9Y4G8 1499 aa7.97□□□□□ -1.13
COMMD3-212ENST00000479958 TCRBV5S2A0A599 114 aa7.96□□□□□ -1.13
COMMD3-212ENST00000479958 MSCO60682 206 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms