RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 CLIC4Q9Y696 253 aa14.22□□□□□ -0.13
TRAPPC12-218ENST00000479897 ELP1O95163 1332 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 DOCK5Q9H7D0 1870 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 SPATA31C2B4DYI2 1134 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 MSH4O15457 936 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 OR52Z1P0C646 297 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 TGFB3P10600 412 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 ATP2B1P20020 1258 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 PTGDRQ13258 359 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 SEMA3FQ13275 785 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 ZNF174Q15697 407 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 SLAIN1Q8ND83 568 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 CYP2W1Q8TAV3 490 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 FAM20AQ96MK3 541 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 SENP7Q9BQF6 1050 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 WDR11Q9BZH6 1224 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 KCNH7Q9NS40 1196 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 TRIM17Q9Y577 477 aa14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 DDX49Q9Y6V7 483 aaKnown RBP14.21□□□□□ -0.13
TRAPPC12-218ENST00000479897 FRMPD3Q5JV73 1810 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 PPP6R2O75170 966 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 BAG4O95429 457 aaKnown RBP14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 HMGCRP04035 888 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 CYBAP13498 195 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 CALCRLQ16602 461 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 FOXD4L6Q3SYB3 417 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 MFSD14CQ5VZR4 134 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 TAPT1Q6NXT6 567 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 FOXD4L3Q6VB84 417 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 FBXO16Q8IX29 292 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 SLFN12Q8IYM2 578 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 TMEM87AQ8NBN3 555 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 RAET1EQ8TD07 263 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 KCNG4Q8TDN1 519 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 SCFD2Q8WU76 684 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 LEO1Q8WVC0 666 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 HAS1Q92839 578 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 SLC5A5Q92911 643 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 RIT2Q99578 217 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 TMEM60Q9H2L4 133 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 RCOR1Q9UKL0 485 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 CNPY2Q9Y2B0 182 aa14.2□□□□□ -0.14
TRAPPC12-218ENST00000479897 WDR81Q562E7 1941 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 NFASCO94856 1347 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 IPO5O00410 1097 aaKnown RBP14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 SPTLC2O15270 562 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 ADCY3O60266 1144 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 ZNF865P0CJ78 1059 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 ARP10275 920 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 KCNA2P16389 499 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 ACVR2BQ13705 512 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 TTLL4Q14679 1199 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 STK38Q15208 465 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 MAP3K21Q5TCX8 1036 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 CCDC62Q6P9F0 684 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 CTU1Q7Z7A3 348 aaKnown RBP14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 FERMT2Q96AC1 680 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 CHAMP1Q96JM3 812 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 GBP4Q96PP9 640 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 AGO4Q9HCK5 861 aaKnown RBP14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 TFIP11Q9UBB9 837 aaKnown RBP14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 PTPN22Q9Y2R2 807 aa14.19□□□□□ -0.14
TRAPPC12-218ENST00000479897 NKRFO15226 690 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 PSMD10O75832 226 aa14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 NCLP19338 710 aaKnown RBP14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 UBA1P22314 1058 aaKnown RBP14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 CYP2C19P33261 490 aa14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 FXR2P51116 673 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 LBX1P52954 281 aa14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 ITGB3BPQ13352 177 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 CSPP1Q1MSJ5 1256 aa14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 B3GNT9Q6UX72 402 aa14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 SEPT14Q6ZU15 432 aa14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 GIMAP8Q8ND71 665 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 ZFP91Q96JP5 570 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 SPATA32Q96LK8 384 aa14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 ZNF577Q9BSK1 485 aa14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 TBC1D22BQ9NU19 505 aa14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 FBXO2Q9UK22 296 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 SRPRBQ9Y5M8 271 aaKnown RBP14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 PTCH2Q9Y6C5 1203 aa14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 MRVI1Q9Y6F6 885 aa14.18□□□□□ -0.14
TRAPPC12-218ENST00000479897 HTTP42858 3142 aa14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 DHX15O43143 795 aaKnown RBP14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 ARIH2O95376 493 aa14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 GRK4P32298 578 aa14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 CEBPZQ03701 1054 aaKnown RBP14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 SPIRE1Q08AE8 756 aa14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 PPP2R5CQ13362 524 aa14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 NEDD9Q14511 834 aa14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 LRCH2Q5VUJ6 765 aa14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 EEPD1Q7L9B9 569 aa14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 IGSF22Q8N9C0 903 aa14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 KRI1Q8N9T8 703 aaKnown RBP14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 EMID1Q96A84 441 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 DDX41Q9UJV9 622 aaKnown RBP14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 VAV3Q9UKW4 847 aa14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 ZHX1Q9UKY1 873 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC12-218ENST00000479897 GAS7O60861 476 aa14.16□□□□□ -0.14
TRAPPC12-218ENST00000479897 ATP9AO75110 1047 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms