RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 GCM1Q9NP62 436 aa7.91□□□□□ -1.14
CCDC58-204ENST00000479414 PLAAQ9Y263 795 aa7.91□□□□□ -1.14
CCDC58-204ENST00000479414 SHROOM4Q9ULL8 1493 aa7.9□□□□□ -1.14
CCDC58-204ENST00000479414 GNAT1P11488 350 aa7.9□□□□□ -1.14
CCDC58-204ENST00000479414 ZNF200P98182 395 aaPredicted RBP7.9□□□□□ -1.14
CCDC58-204ENST00000479414 EGFLAMQ63HQ2 1017 aa7.9□□□□□ -1.14
CCDC58-204ENST00000479414 TMEM132EQ6IEE7 984 aa7.9□□□□□ -1.14
CCDC58-204ENST00000479414 SYDE1Q6ZW31 735 aaPredicted RBP7.9□□□□□ -1.14
CCDC58-204ENST00000479414 C16orf59Q7L2K0 433 aa7.9□□□□□ -1.14
CCDC58-204ENST00000479414 ZC3H7AQ8IWR0 971 aaKnown RBP7.9□□□□□ -1.14
CCDC58-204ENST00000479414 BHLHE22Q8NFJ8 381 aaPredicted RBP7.9□□□□□ -1.14
CCDC58-204ENST00000479414 PHOSPHO1Q8TCT1 267 aa7.9□□□□□ -1.14
CCDC58-204ENST00000479414 NINJ1Q92982 152 aa7.9□□□□□ -1.14
CCDC58-204ENST00000479414 SMOC1Q9H4F8 434 aa7.9□□□□□ -1.14
CCDC58-204ENST00000479414 INTS7Q9NVH2 962 aaKnown RBP7.9□□□□□ -1.14
CCDC58-204ENST00000479414 GSTA4O15217 222 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 MAFKO60675 156 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 NPTXRO95502 500 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 CKMP06732 381 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 MED14OSP0DP75 135 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 KCNA6P17658 529 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 SDSP20132 328 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 GLDCP23378 1020 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 CDR1P51861 262 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 DLG4P78352 724 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 MILR1Q7Z6M3 343 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 LDHDQ86WU2 507 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 UHMK1Q8TAS1 419 aaKnown RBP7.89□□□□□ -1.15
CCDC58-204ENST00000479414 PANK1Q8TE04 598 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 ALG3Q92685 438 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 KCNN1Q92952 543 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 PPP1R16BQ96T49 567 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 CELF4Q9BZC1 486 aaKnown RBP7.89□□□□□ -1.15
CCDC58-204ENST00000479414 MAGEC2Q9UBF1 373 aaPredicted RBP7.89□□□□□ -1.15
CCDC58-204ENST00000479414 PLA2G2DQ9UNK4 145 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 PCDHA5Q9Y5H7 936 aa7.89□□□□□ -1.15
CCDC58-204ENST00000479414 TCRBV5S2A0A599 114 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 B4E1Z4 1266 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 KRT1P04264 644 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 ASLP04424 464 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 ASGR2P07307 311 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 SRGAP2CP0DJJ0 459 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 COL6A2P12110 1019 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 DALRD3Q5D0E6 543 aaKnown RBP7.88□□□□□ -1.15
CCDC58-204ENST00000479414 FAM47CQ5HY64 1035 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 ZNF648Q5T619 568 aaPredicted RBP7.88□□□□□ -1.15
CCDC58-204ENST00000479414 MIB1Q86YT6 1006 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 MZB1Q8WU39 189 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 CPA5Q8WXQ8 436 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 SGPP1Q9BX95 441 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 PDGFDQ9GZP0 370 aaPredicted RBP7.88□□□□□ -1.15
CCDC58-204ENST00000479414 RNF38Q9H0F5 515 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 MYOTQ9UBF9 498 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 PCDHB4Q9Y5E5 795 aa7.88□□□□□ -1.15
CCDC58-204ENST00000479414 CCDC66A2RUB6 948 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 ETV2O00321 342 aaPredicted RBP7.87□□□□□ -1.15
CCDC58-204ENST00000479414 N4BP3O15049 544 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 NKRFO15226 690 aaKnown RBP eCLIP7.87□□□□□ -1.15
CCDC58-204ENST00000479414 PYGMP11217 842 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 PMLP29590 882 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 IGFALSP35858 605 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 TXKP42681 527 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 TARBP2Q15633 366 aaKnown RBP7.87□□□□□ -1.15
CCDC58-204ENST00000479414 GPR19Q15760 415 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 ABHD17CQ6PCB6 329 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 AMIGO3Q86WK7 504 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 SLC38A3Q99624 504 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 BCAS3Q9H6U6 928 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 CATSPERZQ9NTU4 200 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 ASH2LQ9UBL3 628 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 DSEQ9UL01 958 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 CBLCQ9ULV8 474 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 NUB1Q9Y5A7 615 aa7.87□□□□□ -1.15
CCDC58-204ENST00000479414 TNPO3Q9Y5L0 923 aaKnown RBP7.87□□□□□ -1.15
CCDC58-204ENST00000479414 TCRBV5S4A2TA0A5A2 114 aa7.86□□□□□ -1.15
CCDC58-204ENST00000479414 TMEM253P0C7T8 217 aa7.86□□□□□ -1.15
CCDC58-204ENST00000479414 NCAM1P13591 858 aa7.86□□□□□ -1.15
CCDC58-204ENST00000479414 IGFBP6P24592 240 aaPredicted RBP7.86□□□□□ -1.15
CCDC58-204ENST00000479414 EPHB3P54753 998 aa7.86□□□□□ -1.15
CCDC58-204ENST00000479414 ST5P78524 1137 aa7.86□□□□□ -1.15
CCDC58-204ENST00000479414 LACTBP83111 547 aaPredicted RBP7.86□□□□□ -1.15
CCDC58-204ENST00000479414 IGDCC3Q8IVU1 814 aa7.86□□□□□ -1.15
CCDC58-204ENST00000479414 FAM126BQ8IXS8 530 aa7.86□□□□□ -1.15
CCDC58-204ENST00000479414 NIM1KQ8IY84 436 aa7.86□□□□□ -1.15
CCDC58-204ENST00000479414 MFSD3Q96ES6 412 aa7.86□□□□□ -1.15
CCDC58-204ENST00000479414 COQ6Q9Y2Z9 468 aa7.86□□□□□ -1.15
CCDC58-204ENST00000479414 ZNF561-AS1K7EIQ3 104 aa7.85□□□□□ -1.15
CCDC58-204ENST00000479414 IRS4O14654 1257 aaPredicted RBP7.85□□□□□ -1.15
CCDC58-204ENST00000479414 OPA1O60313 960 aa7.85□□□□□ -1.15
CCDC58-204ENST00000479414 TSPAN15O95858 294 aa7.85□□□□□ -1.15
CCDC58-204ENST00000479414 AMY2AP04746 511 aa7.85□□□□□ -1.15
CCDC58-204ENST00000479414 PDE6AP16499 860 aa7.85□□□□□ -1.15
CCDC58-204ENST00000479414 PFKLP17858 780 aa7.85□□□□□ -1.15
CCDC58-204ENST00000479414 AMY2BP19961 511 aa7.85□□□□□ -1.15
CCDC58-204ENST00000479414 DNM2P50570 870 aa7.85□□□□□ -1.15
CCDC58-204ENST00000479414 EPHA5P54756 1037 aa7.85□□□□□ -1.15
CCDC58-204ENST00000479414 ZNF460Q14592 562 aa7.85□□□□□ -1.15
CCDC58-204ENST00000479414 CRY1Q16526 586 aa7.85□□□□□ -1.15
CCDC58-204ENST00000479414 ZCCHC8Q6NZY4 707 aaKnown RBP7.85□□□□□ -1.15
CCDC58-204ENST00000479414 DDX53Q86TM3 631 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms