RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 NONOQ15233 471 aaKnown RBP eCLIP28.5■■■□□ 2.15
PERM1-203ENST00000479361 CEP55Q53EZ4 464 aa28.5■■■□□ 2.15
PERM1-203ENST00000479361 BRDTQ58F21 947 aaPredicted RBP28.5■■■□□ 2.15
PERM1-203ENST00000479361 GNASQ5JWF2 1037 aa28.5■■■□□ 2.15
PERM1-203ENST00000479361 PCSK9Q8NBP7 692 aaKnown RBP28.5■■■□□ 2.15
PERM1-203ENST00000479361 KLHDC9Q8NEP7 349 aa28.5■■■□□ 2.15
PERM1-203ENST00000479361 MXRA8Q9BRK3 442 aa28.5■■■□□ 2.15
PERM1-203ENST00000479361 TSEN34Q9BSV6 310 aaKnown RBP28.5■■■□□ 2.15
PERM1-203ENST00000479361 ZEB2O60315 1214 aa28.49■■■□□ 2.15
PERM1-203ENST00000479361 GJB2P29033 226 aa28.49■■■□□ 2.15
PERM1-203ENST00000479361 MNX1P50219 401 aaPredicted RBP28.49■■■□□ 2.15
PERM1-203ENST00000479361 CPT1AP50416 773 aa28.49■■■□□ 2.15
PERM1-203ENST00000479361 USP11P51784 963 aa28.49■■■□□ 2.15
PERM1-203ENST00000479361 FSCN1Q16658 493 aaKnown RBP28.49■■■□□ 2.15
PERM1-203ENST00000479361 IFFO2Q5TF58 517 aa28.49■■■□□ 2.15
PERM1-203ENST00000479361 NIPA1Q7RTP0 329 aa28.49■■■□□ 2.15
PERM1-203ENST00000479361 UBE2Q1Q7Z7E8 422 aa28.49■■■□□ 2.15
PERM1-203ENST00000479361 FBXO18Q8NFZ0 1043 aa28.49■■■□□ 2.15
PERM1-203ENST00000479361 TBCKQ8TEA7 893 aa28.49■■■□□ 2.15
PERM1-203ENST00000479361 PAWRQ96IZ0 340 aaKnown RBP28.49■■■□□ 2.15
PERM1-203ENST00000479361 RGS19P49795 217 aa28.48■■■□□ 2.15
PERM1-203ENST00000479361 LAMC2Q13753 1193 aa28.48■■■□□ 2.15
PERM1-203ENST00000479361 NEDD9Q14511 834 aa28.48■■■□□ 2.15
PERM1-203ENST00000479361 DHX37Q8IY37 1157 aaKnown RBP28.48■■■□□ 2.15
PERM1-203ENST00000479361 DIS3L2Q8IYB7 885 aaKnown RBP28.48■■■□□ 2.15
PERM1-203ENST00000479361 GIMAP8Q8ND71 665 aaPredicted RBP28.48■■■□□ 2.15
PERM1-203ENST00000479361 OXER1Q8TDS5 423 aa28.48■■■□□ 2.15
PERM1-203ENST00000479361 COPS5Q92905 334 aa28.48■■■□□ 2.15
PERM1-203ENST00000479361 EMID1Q96A84 441 aaPredicted RBP28.48■■■□□ 2.15
PERM1-203ENST00000479361 SENP7Q9BQF6 1050 aa28.48■■■□□ 2.15
PERM1-203ENST00000479361 C11orf49Q9H6J7 331 aa28.48■■■□□ 2.15
PERM1-203ENST00000479361 MYADML2A6NDP7 307 aa28.47■■■□□ 2.15
PERM1-203ENST00000479361 MOXD2PA6NHM9 499 aa28.47■■■□□ 2.15
PERM1-203ENST00000479361 UBA1P22314 1058 aaKnown RBP28.47■■■□□ 2.15
PERM1-203ENST00000479361 GUCY1B3Q02153 619 aa28.47■■■□□ 2.15
PERM1-203ENST00000479361 ARHGAP1Q07960 439 aa28.47■■■□□ 2.15
PERM1-203ENST00000479361 KCNA10Q16322 511 aa28.47■■■□□ 2.15
PERM1-203ENST00000479361 DIS3LQ8TF46 1054 aaKnown RBP28.47■■■□□ 2.15
PERM1-203ENST00000479361 INTS4Q96HW7 963 aaKnown RBP28.47■■■□□ 2.15
PERM1-203ENST00000479361 MEIS1O00470 390 aa28.46■■■□□ 2.15
PERM1-203ENST00000479361 CTAGE5O15320 804 aa28.46■■■□□ 2.15
PERM1-203ENST00000479361 GGPS1O95749 300 aa28.46■■■□□ 2.15
PERM1-203ENST00000479361 PTGS1P23219 599 aa28.46■■■□□ 2.15
PERM1-203ENST00000479361 CIITAP33076 1130 aa28.46■■■□□ 2.15
PERM1-203ENST00000479361 SEMA3FQ13275 785 aa28.46■■■□□ 2.15
PERM1-203ENST00000479361 CELF3Q5SZQ8 465 aaKnown RBP28.46■■■□□ 2.15
PERM1-203ENST00000479361 MLXIPQ9HAP2 919 aa28.46■■■□□ 2.15
PERM1-203ENST00000479361 PHF24Q9UPV7 400 aa28.46■■■□□ 2.15
PERM1-203ENST00000479361 BTBD18B2RXH4 712 aa28.45■■■□□ 2.14
PERM1-203ENST00000479361 COL6A1P12109 1028 aa28.45■■■□□ 2.14
PERM1-203ENST00000479361 BEX3Q00994 111 aa28.45■■■□□ 2.14
PERM1-203ENST00000479361 SETQ01105 290 aaPredicted RBP28.45■■■□□ 2.14
PERM1-203ENST00000479361 SP2Q02086 613 aa28.45■■■□□ 2.14
PERM1-203ENST00000479361 NR5A1Q13285 461 aa28.45■■■□□ 2.14
PERM1-203ENST00000479361 CCSAPQ6IQ19 270 aaPredicted RBP28.45■■■□□ 2.14
PERM1-203ENST00000479361 PIK3AP1Q6ZUJ8 805 aa28.45■■■□□ 2.14
PERM1-203ENST00000479361 CYP2W1Q8TAV3 490 aa28.45■■■□□ 2.14
PERM1-203ENST00000479361 KCNH7Q9NS40 1196 aa28.45■■■□□ 2.14
PERM1-203ENST00000479361 A6NJR5 290 aa28.44■■■□□ 2.14
PERM1-203ENST00000479361 FAM86B1E9PN63 330 aa28.44■■■□□ 2.14
PERM1-203ENST00000479361 FAM86B2P0C5J1 330 aa28.44■■■□□ 2.14
PERM1-203ENST00000479361 ACLYP53396 1101 aa28.44■■■□□ 2.14
PERM1-203ENST00000479361 IRX5P78411 483 aaPredicted RBP28.44■■■□□ 2.14
PERM1-203ENST00000479361 MYSM1Q5VVJ2 828 aa28.44■■■□□ 2.14
PERM1-203ENST00000479361 PLA2G4DQ86XP0 818 aa28.44■■■□□ 2.14
PERM1-203ENST00000479361 TNFRSF25Q93038 417 aa28.44■■■□□ 2.14
PERM1-203ENST00000479361 SENP6Q9GZR1 1112 aaPredicted RBP28.44■■■□□ 2.14
PERM1-203ENST00000479361 KPNA6O60684 536 aa28.43■■■□□ 2.14
PERM1-203ENST00000479361 ASGR1P07306 291 aa28.43■■■□□ 2.14
PERM1-203ENST00000479361 GNL2Q13823 731 aaKnown RBP28.43■■■□□ 2.14
PERM1-203ENST00000479361 INF2Q27J81 1249 aa28.43■■■□□ 2.14
PERM1-203ENST00000479361 METTL7BQ6UX53 244 aa28.43■■■□□ 2.14
PERM1-203ENST00000479361 PPTC7Q8NI37 304 aa28.43■■■□□ 2.14
PERM1-203ENST00000479361 AFG1LQ8WV93 481 aa28.43■■■□□ 2.14
PERM1-203ENST00000479361 FOXP1Q9H334 677 aaPredicted RBP28.43■■■□□ 2.14
PERM1-203ENST00000479361 POLR3EQ9NVU0 708 aa28.43■■■□□ 2.14
PERM1-203ENST00000479361 IGLV3-22A0A075B6J6 115 aa28.42■■■□□ 2.14
PERM1-203ENST00000479361 KCNA2P16389 499 aa28.42■■■□□ 2.14
PERM1-203ENST00000479361 PRR16Q569H4 304 aa28.42■■■□□ 2.14
PERM1-203ENST00000479361 MOXD1Q6UVY6 613 aa28.42■■■□□ 2.14
PERM1-203ENST00000479361 NEK8Q86SG6 692 aa28.42■■■□□ 2.14
PERM1-203ENST00000479361 GLT1D1Q96MS3 346 aa28.42■■■□□ 2.14
PERM1-203ENST00000479361 SPATA33Q96N06 139 aa28.42■■■□□ 2.14
PERM1-203ENST00000479361 NAP1L4Q99733 375 aaKnown RBP28.42■■■□□ 2.14
PERM1-203ENST00000479361 MYH7BA7E2Y1 1941 aa28.41■■■□□ 2.14
PERM1-203ENST00000479361 H3BQV1 296 aa28.41■■■□□ 2.14
PERM1-203ENST00000479361 CABYRO75952 493 aa28.41■■■□□ 2.14
PERM1-203ENST00000479361 CYFIP1Q7L576 1253 aa28.41■■■□□ 2.14
PERM1-203ENST00000479361 FERMT2Q96AC1 680 aa28.41■■■□□ 2.14
PERM1-203ENST00000479361 HTATIP2Q9BUP3 242 aa28.41■■■□□ 2.14
PERM1-203ENST00000479361 AGO4Q9HCK5 861 aaKnown RBP28.41■■■□□ 2.14
PERM1-203ENST00000479361 CYP3A7-CYP3A51PA0A087WV96 503 aa28.4■■■□□ 2.14
PERM1-203ENST00000479361 A0A1W2PQ45 241 aaPredicted RBP28.4■■■□□ 2.14
PERM1-203ENST00000479361 A0A1W2PQY0 241 aa28.4■■■□□ 2.14
PERM1-203ENST00000479361 NOP56O00567 594 aaKnown RBP28.4■■■□□ 2.14
PERM1-203ENST00000479361 ATP9AO75110 1047 aa28.4■■■□□ 2.14
PERM1-203ENST00000479361 MMP3P08254 477 aa28.4■■■□□ 2.14
PERM1-203ENST00000479361 ARP10275 920 aa28.4■■■□□ 2.14
PERM1-203ENST00000479361 GCFC2P16383 781 aaKnown RBP28.4■■■□□ 2.14
PERM1-203ENST00000479361 PDCP20941 246 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms