RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 SNX14Q9Y5W7 946 aa20.49■□□□□ 0.87
HLA-A-206ENST00000479320 KLF18A0A0U1RQI7 1052 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 SPATA31C2B4DYI2 1134 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 PPFIA4O75335 1185 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 HOXD8P13378 290 aaPredicted RBP20.48■□□□□ 0.87
HLA-A-206ENST00000479320 ICAM3P32942 547 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 RTN1Q16799 776 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 GNPTABQ3T906 1256 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 VWCEQ96DN2 955 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 SPATA33Q96N06 139 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 GUCD1Q96NT3 240 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 SEMA6BQ9H3T3 888 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 BCAS3Q9H6U6 928 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 MLXIPQ9HAP2 919 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 STXBP5LQ9Y2K9 1186 aa20.48■□□□□ 0.87
HLA-A-206ENST00000479320 TRIP12Q14669 1992 aaPredicted RBP20.48■□□□□ 0.87
HLA-A-206ENST00000479320 CNTNAP5Q8WYK1 1306 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 SCN5AQ14524 2016 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 DOCK5Q9H7D0 1870 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 HAS3O00219 553 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 REC8O95072 547 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 ZNF286BP0CG31 522 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 PSEN2P49810 448 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 FUT2Q10981 343 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 PTGISQ16647 500 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 PCNX4Q63HM2 1172 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 GDF6Q6KF10 455 aaPredicted RBP20.47■□□□□ 0.87
HLA-A-206ENST00000479320 HEATR3Q7Z4Q2 680 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 RPUSD2Q8IZ73 545 aaKnown RBP20.47■□□□□ 0.87
HLA-A-206ENST00000479320 HERVK_113Q902F9 699 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 JAKMIP1Q96N16 626 aaKnown RBP20.47■□□□□ 0.87
HLA-A-206ENST00000479320 TTYH1Q9H313 450 aaPredicted RBP20.47■□□□□ 0.87
HLA-A-206ENST00000479320 FAM217BQ9NTX9 383 aaPredicted RBP20.47■□□□□ 0.87
HLA-A-206ENST00000479320 NOD1Q9Y239 953 aa20.47■□□□□ 0.87
HLA-A-206ENST00000479320 GOLGA8AA7E2F4 631 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 GOLGA8BA8MQT2 603 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 F2P00734 622 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 CDC27P30260 824 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 FGD1P98174 961 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 SEMA3FQ13275 785 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 MFSD10Q14728 455 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 UBE2SQ16763 222 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 XRRA1Q6P2D8 792 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 Q6ZUG5 572 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 CTAGE1Q96RT6 745 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 ALG1Q9BT22 464 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 KATNAL1Q9BW62 490 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 CXXC1Q9P0U4 656 aaPredicted RBP20.46■□□□□ 0.87
HLA-A-206ENST00000479320 HDAC6Q9UBN7 1215 aa20.46■□□□□ 0.87
HLA-A-206ENST00000479320 V9GY48 417 aaPredicted RBP20.46■□□□□ 0.87
HLA-A-206ENST00000479320 PITPNM1O00562 1244 aa20.45■□□□□ 0.86
HLA-A-206ENST00000479320 FIBPO43427 364 aa20.45■□□□□ 0.86
HLA-A-206ENST00000479320 NEDD9Q14511 834 aa20.45■□□□□ 0.86
HLA-A-206ENST00000479320 KIAA0753Q2KHM9 967 aa20.45■□□□□ 0.86
HLA-A-206ENST00000479320 WWC2Q6AWC2 1192 aa20.45■□□□□ 0.86
HLA-A-206ENST00000479320 BLOC1S2Q6QNY1 142 aa20.45■□□□□ 0.86
HLA-A-206ENST00000479320 OTOP2Q7RTS6 562 aa20.45■□□□□ 0.86
HLA-A-206ENST00000479320 C7orf31Q8N865 590 aa20.45■□□□□ 0.86
HLA-A-206ENST00000479320 RETREG2Q8NC44 543 aa20.45■□□□□ 0.86
HLA-A-206ENST00000479320 GTF2IRD1Q9UHL9 959 aa20.45■□□□□ 0.86
HLA-A-206ENST00000479320 GRXCR1A8MXD5 290 aa20.44■□□□□ 0.86
HLA-A-206ENST00000479320 IQCF3P0C7M6 154 aa20.44■□□□□ 0.86
HLA-A-206ENST00000479320 RCAN1P53805 252 aa20.44■□□□□ 0.86
HLA-A-206ENST00000479320 APOBRQ0VD83 1088 aa20.44■□□□□ 0.86
HLA-A-206ENST00000479320 BFSP2Q13515 415 aa20.44■□□□□ 0.86
HLA-A-206ENST00000479320 CYFIP1Q7L576 1253 aa20.44■□□□□ 0.86
HLA-A-206ENST00000479320 C16orf70Q9BSU1 422 aa20.44■□□□□ 0.86
HLA-A-206ENST00000479320 NAP1L2Q9ULW6 460 aaPredicted RBP20.44■□□□□ 0.86
HLA-A-206ENST00000479320 DNAJB2P25686 324 aa20.43■□□□□ 0.86
HLA-A-206ENST00000479320 ADD1P35611 737 aaKnown RBP20.43■□□□□ 0.86
HLA-A-206ENST00000479320 TYW1BQ6NUM6 668 aa20.43■□□□□ 0.86
HLA-A-206ENST00000479320 DEFB128Q7Z7B8 93 aa20.43■□□□□ 0.86
HLA-A-206ENST00000479320 NLRX1Q86UT6 975 aa20.43■□□□□ 0.86
HLA-A-206ENST00000479320 BRF1Q92994 677 aa20.43■□□□□ 0.86
HLA-A-206ENST00000479320 CDX2Q99626 313 aaPredicted RBP20.43■□□□□ 0.86
HLA-A-206ENST00000479320 MTIF3Q9H2K0 278 aaKnown RBP20.43■□□□□ 0.86
HLA-A-206ENST00000479320 PPP4R2Q9NY27 417 aa20.43■□□□□ 0.86
HLA-A-206ENST00000479320 PCDHA6Q9UN73 950 aa20.43■□□□□ 0.86
HLA-A-206ENST00000479320 PCDHA8Q9Y5H6 950 aa20.43■□□□□ 0.86
HLA-A-206ENST00000479320 TANC1Q9C0D5 1861 aa20.42■□□□□ 0.86
HLA-A-206ENST00000479320 TMEM265A0A087WTH1 108 aa20.42■□□□□ 0.86
HLA-A-206ENST00000479320 SPDYE3A6NKU9 549 aa20.42■□□□□ 0.86
HLA-A-206ENST00000479320 PFKMP08237 780 aa20.42■□□□□ 0.86
HLA-A-206ENST00000479320 RPS6KB1P23443 525 aa20.42■□□□□ 0.86
HLA-A-206ENST00000479320 RFC2P35250 354 aa20.42■□□□□ 0.86
HLA-A-206ENST00000479320 NAPAP54920 295 aa20.42■□□□□ 0.86
HLA-A-206ENST00000479320 METTL7BQ6UX53 244 aa20.42■□□□□ 0.86
HLA-A-206ENST00000479320 FBXL16Q8N461 479 aa20.42■□□□□ 0.86
HLA-A-206ENST00000479320 SENP7Q9BQF6 1050 aa20.42■□□□□ 0.86
HLA-A-206ENST00000479320 PBX4Q9BYU1 374 aa20.42■□□□□ 0.86
HLA-A-206ENST00000479320 AGXT2Q9BYV1 514 aa20.42■□□□□ 0.86
HLA-A-206ENST00000479320 H3BRB1 525 aa20.41■□□□□ 0.86
HLA-A-206ENST00000479320 NOP56O00567 594 aaKnown RBP20.41■□□□□ 0.86
HLA-A-206ENST00000479320 EPB41L2O43491 1005 aaKnown RBP20.41■□□□□ 0.86
HLA-A-206ENST00000479320 PSMA5P28066 241 aa20.41■□□□□ 0.86
HLA-A-206ENST00000479320 PBX2P40425 430 aa20.41■□□□□ 0.86
HLA-A-206ENST00000479320 METAP2P50579 478 aaKnown RBP eCLIP20.41■□□□□ 0.86
HLA-A-206ENST00000479320 CCDC155Q8N6L0 562 aa20.41■□□□□ 0.86
HLA-A-206ENST00000479320 CAGE1Q8TC20 777 aa20.41■□□□□ 0.86
HLA-A-206ENST00000479320 DHX38Q92620 1227 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms