RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 HAND2P61296 217 aa16.92■□□□□ 0.3
USP11-207ENST00000478596 HYAL1Q12794 435 aa16.92■□□□□ 0.3
USP11-207ENST00000478596 RNF20Q5VTR2 975 aa16.92■□□□□ 0.3
USP11-207ENST00000478596 GDF6Q6KF10 455 aaPredicted RBP16.92■□□□□ 0.3
USP11-207ENST00000478596 CTR9Q6PD62 1173 aa16.92■□□□□ 0.3
USP11-207ENST00000478596 LRRC47Q8N1G4 583 aaKnown RBP16.92■□□□□ 0.3
USP11-207ENST00000478596 LSG1Q9H089 658 aaKnown RBP16.92■□□□□ 0.3
USP11-207ENST00000478596 TOMM22Q9NS69 142 aa16.92■□□□□ 0.3
USP11-207ENST00000478596 CD207Q9UJ71 328 aa16.92■□□□□ 0.3
USP11-207ENST00000478596 ZFHX4Q86UP3 3567 aa16.92■□□□□ 0.3
USP11-207ENST00000478596 TBX10O75333 385 aa16.91■□□□□ 0.3
USP11-207ENST00000478596 EYA4O95677 639 aa16.91■□□□□ 0.3
USP11-207ENST00000478596 BMP3P12645 472 aa16.91■□□□□ 0.3
USP11-207ENST00000478596 ALAS1P13196 640 aa16.91■□□□□ 0.3
USP11-207ENST00000478596 STAT2P52630 851 aa16.91■□□□□ 0.3
USP11-207ENST00000478596 TRAF7Q6Q0C0 670 aa16.91■□□□□ 0.3
USP11-207ENST00000478596 PURBQ96QR8 312 aaKnown RBP16.91■□□□□ 0.3
USP11-207ENST00000478596 ADD3Q9UEY8 706 aaKnown RBP16.91■□□□□ 0.3
USP11-207ENST00000478596 KMT2BQ9UMN6 2715 aaPredicted RBP16.9■□□□□ 0.3
USP11-207ENST00000478596 ZNF213O14771 459 aa16.9■□□□□ 0.3
USP11-207ENST00000478596 GALR2O43603 387 aaPredicted RBP16.9■□□□□ 0.3
USP11-207ENST00000478596 LGR5O75473 907 aa16.9■□□□□ 0.3
USP11-207ENST00000478596 PPARAQ07869 468 aa16.9■□□□□ 0.3
USP11-207ENST00000478596 PPP2R5BQ15173 497 aa16.9■□□□□ 0.3
USP11-207ENST00000478596 MUM1L1Q5H9M0 696 aa16.9■□□□□ 0.3
USP11-207ENST00000478596 FAM160B2Q86V87 743 aa16.9■□□□□ 0.3
USP11-207ENST00000478596 MYOCDQ8IZQ8 938 aa16.9■□□□□ 0.3
USP11-207ENST00000478596 CHURC1Q8WUH1 139 aa16.9■□□□□ 0.3
USP11-207ENST00000478596 LMAN2LQ9H0V9 348 aa16.9■□□□□ 0.3
USP11-207ENST00000478596 VPS13AQ96RL7 3174 aa16.9■□□□□ 0.3
USP11-207ENST00000478596 DNAH14Q0VDD8 3507 aa16.9■□□□□ 0.3
USP11-207ENST00000478596 TMEM232C9JQI7 657 aa16.89■□□□□ 0.29
USP11-207ENST00000478596 FOXP2O15409 715 aa16.89■□□□□ 0.29
USP11-207ENST00000478596 KRT37O76014 449 aa16.89■□□□□ 0.29
USP11-207ENST00000478596 FGAP02671 866 aa16.89■□□□□ 0.29
USP11-207ENST00000478596 ALDH5A1P51649 535 aaPredicted RBP16.89■□□□□ 0.29
USP11-207ENST00000478596 MBTPS1Q14703 1052 aa16.89■□□□□ 0.29
USP11-207ENST00000478596 ALX1Q15699 326 aa16.89■□□□□ 0.29
USP11-207ENST00000478596 YME1L1Q96TA2 773 aa16.89■□□□□ 0.29
USP11-207ENST00000478596 C5orf67F2Z3F1 127 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 CTDSPL2Q05D32 466 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 RRP12Q5JTH9 1297 aaKnown RBP16.88■□□□□ 0.29
USP11-207ENST00000478596 SLFN13Q68D06 897 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 NSMFQ6X4W1 530 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 SCFD2Q8WU76 684 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 STAG1Q8WVM7 1258 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 MAP4K1Q92918 833 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 MSLNLQ96KJ4 702 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 MKNK2Q9HBH9 465 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 ZNF287Q9HBT7 754 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 MTMR4Q9NYA4 1195 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 GTF2IRD1Q9UHL9 959 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 EMSYQ7Z589 1322 aa16.88■□□□□ 0.29
USP11-207ENST00000478596 PLA2G6O60733 806 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 RGS20O76081 388 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 TTLL1O95922 423 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 RB1P06400 928 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 CHMP4BP1P59074 171 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 PDE4BQ07343 736 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 TRDNQ13061 729 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 PTK7Q13308 1070 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 ADAM15Q13444 863 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 TRIM71Q2Q1W2 868 aaKnown RBP16.87■□□□□ 0.29
USP11-207ENST00000478596 SBK1Q52WX2 424 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 CREB3L3Q68CJ9 461 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 RALYLQ86SE5 291 aaKnown RBP16.87■□□□□ 0.29
USP11-207ENST00000478596 TOP1MTQ969P6 601 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 CEP95Q96GE4 821 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 BACH2Q9BYV9 841 aa16.87■□□□□ 0.29
USP11-207ENST00000478596 RNF41Q9H4P4 317 aaPredicted RBP16.87■□□□□ 0.29
USP11-207ENST00000478596 TRIP12Q14669 1992 aaPredicted RBP16.86■□□□□ 0.29
USP11-207ENST00000478596 MED19A0JLT2 244 aaPredicted RBP16.86■□□□□ 0.29
USP11-207ENST00000478596 SLC27A2O14975 620 aa16.86■□□□□ 0.29
USP11-207ENST00000478596 KDM4AO75164 1064 aa16.86■□□□□ 0.29
USP11-207ENST00000478596 SEC24BO95487 1268 aa16.86■□□□□ 0.29
USP11-207ENST00000478596 BAATQ14032 418 aaPredicted RBP16.86■□□□□ 0.29
USP11-207ENST00000478596 ZNF618Q5T7W0 954 aa16.86■□□□□ 0.29
USP11-207ENST00000478596 SMRP1Q8NCR6 262 aa16.86■□□□□ 0.29
USP11-207ENST00000478596 DBF4BQ8NFT6 615 aa16.86■□□□□ 0.29
USP11-207ENST00000478596 KAT2BQ92831 832 aa16.86■□□□□ 0.29
USP11-207ENST00000478596 COPS5Q92905 334 aa16.86■□□□□ 0.29
USP11-207ENST00000478596 NKD2Q969F2 451 aaPredicted RBP16.86■□□□□ 0.29
USP11-207ENST00000478596 GMCL1Q96IK5 515 aa16.86■□□□□ 0.29
USP11-207ENST00000478596 C11orf84Q9BUA3 381 aaPredicted RBP16.86■□□□□ 0.29
USP11-207ENST00000478596 LINC01565O15544 149 aa16.85■□□□□ 0.29
USP11-207ENST00000478596 ICAM3P32942 547 aa16.85■□□□□ 0.29
USP11-207ENST00000478596 COASYQ13057 564 aa16.85■□□□□ 0.29
USP11-207ENST00000478596 MFSD6Q6ZSS7 791 aa16.85■□□□□ 0.29
USP11-207ENST00000478596 TBC1D10CQ8IV04 446 aa16.85■□□□□ 0.29
USP11-207ENST00000478596 ADSSL1Q8N142 457 aa16.85■□□□□ 0.29
USP11-207ENST00000478596 LCTP09848 1927 aa16.85■□□□□ 0.29
USP11-207ENST00000478596 ZNF292O60281 2723 aa16.85■□□□□ 0.29
USP11-207ENST00000478596 NCOR2Q9Y618 2525 aa16.85■□□□□ 0.29
USP11-207ENST00000478596 GRM6O15303 877 aa16.84■□□□□ 0.29
USP11-207ENST00000478596 EPB41L2O43491 1005 aaKnown RBP16.84■□□□□ 0.29
USP11-207ENST00000478596 PRDM1O75626 825 aa16.84■□□□□ 0.29
USP11-207ENST00000478596 TXNP10599 105 aaKnown RBP16.84■□□□□ 0.29
USP11-207ENST00000478596 EDNRBP24530 442 aa16.84■□□□□ 0.29
USP11-207ENST00000478596 GTF2F1P35269 517 aaKnown RBP eCLIP16.84■□□□□ 0.29
USP11-207ENST00000478596 IKQ13123 557 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms