RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 TCIRG1Q13488 830 aa8.09□□□□□ -1.11
CDK13-204ENST00000478563 TMC3Q7Z5M5 1100 aa8.09□□□□□ -1.11
CDK13-204ENST00000478563 ZSWIM9Q86XI8 627 aa8.09□□□□□ -1.11
CDK13-204ENST00000478563 KIF18BQ86Y91 864 aa8.09□□□□□ -1.11
CDK13-204ENST00000478563 C1QL4Q86Z23 238 aa8.09□□□□□ -1.11
CDK13-204ENST00000478563 SMC1BQ8NDV3 1235 aa8.09□□□□□ -1.11
CDK13-204ENST00000478563 COX4I2Q96KJ9 171 aa8.09□□□□□ -1.11
CDK13-204ENST00000478563 LUC7LQ9NQ29 371 aaKnown RBP8.09□□□□□ -1.11
CDK13-204ENST00000478563 GOLGA6AQ9NYA3 693 aa8.09□□□□□ -1.11
CDK13-204ENST00000478563 B8ZZF3 427 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 STXBP3O00186 592 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 CREB3O43889 395 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 RFPL1O75677 317 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 THBDP07204 575 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 MYBL2P10244 700 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 NAT1P18440 290 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 DSG1Q02413 1049 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 BRD3Q15059 726 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 GFOD2Q3B7J2 385 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 ATP13A4Q4VNC1 1196 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 TSHZ1Q6ZSZ6 1077 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 ZC3H7AQ8IWR0 971 aaKnown RBP8.08□□□□□ -1.12
CDK13-204ENST00000478563 SLC39A13Q96H72 371 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 FAM84AQ96KN4 292 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 MCMBPQ9BTE3 642 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 THG1LQ9NWX6 298 aaKnown RBP8.08□□□□□ -1.12
CDK13-204ENST00000478563 PRR13Q9NZ81 148 aa8.08□□□□□ -1.12
CDK13-204ENST00000478563 LUC7L2Q9Y383 392 aaKnown RBP8.08□□□□□ -1.12
CDK13-204ENST00000478563 SIGLEC6O43699 453 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 GAS7O60861 476 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 PRAMEF1O95521 474 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 LDHAP00338 332 aaKnown RBP8.07□□□□□ -1.12
CDK13-204ENST00000478563 MT-CO1P00395 513 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 ESR1P03372 595 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 CT47B1P0C2W7 299 aaPredicted RBP8.07□□□□□ -1.12
CDK13-204ENST00000478563 SRGAP2CP0DJJ0 459 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 IARSP41252 1262 aaKnown RBP8.07□□□□□ -1.12
CDK13-204ENST00000478563 GPR85P60893 370 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 TPH2Q8IWU9 490 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 IFNL3Q8IZI9 196 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 MENTQ9BUN1 341 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 VTA1Q9NP79 307 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 GPRC5CQ9NQ84 441 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 CHST7Q9NS84 486 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 ZKSCAN5Q9Y2L8 839 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 COQ6Q9Y2Z9 468 aa8.07□□□□□ -1.12
CDK13-204ENST00000478563 ARVCFO00192 962 aa8.06□□□□□ -1.12
CDK13-204ENST00000478563 TRAF5O00463 557 aa8.06□□□□□ -1.12
CDK13-204ENST00000478563 CD3EP07766 207 aa8.06□□□□□ -1.12
CDK13-204ENST00000478563 CYP7A1P22680 504 aa8.06□□□□□ -1.12
CDK13-204ENST00000478563 CCND1P24385 295 aa8.06□□□□□ -1.12
CDK13-204ENST00000478563 POU4F1Q01851 419 aa8.06□□□□□ -1.12
CDK13-204ENST00000478563 TMED8Q6PL24 325 aaPredicted RBP8.06□□□□□ -1.12
CDK13-204ENST00000478563 HDGFL2Q7Z4V5 671 aaPredicted RBP8.06□□□□□ -1.12
CDK13-204ENST00000478563 FAM9AQ8IZU1 332 aaPredicted RBP8.06□□□□□ -1.12
CDK13-204ENST00000478563 CBARPQ8N350 705 aaPredicted RBP8.06□□□□□ -1.12
CDK13-204ENST00000478563 NPLOC4Q8TAT6 608 aa8.06□□□□□ -1.12
CDK13-204ENST00000478563 PIWIL2Q8TC59 973 aaKnown RBP8.06□□□□□ -1.12
CDK13-204ENST00000478563 FRS2Q8WU20 508 aa8.06□□□□□ -1.12
CDK13-204ENST00000478563 UBE2FQ969M7 185 aa8.06□□□□□ -1.12
CDK13-204ENST00000478563 FUBP3Q96I24 572 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDK13-204ENST00000478563 DUSP15Q9H1R2 295 aaPredicted RBP8.06□□□□□ -1.12
CDK13-204ENST00000478563 EMC7Q9NPA0 242 aa8.06□□□□□ -1.12
CDK13-204ENST00000478563 SPTLC3Q9NUV7 552 aa8.06□□□□□ -1.12
CDK13-204ENST00000478563 TMEFF2Q9UIK5 374 aaPredicted RBP8.06□□□□□ -1.12
CDK13-204ENST00000478563 WASH4PA8MWX3 477 aa8.05□□□□□ -1.12
CDK13-204ENST00000478563 VSTM5A8MXK1 200 aa8.05□□□□□ -1.12
CDK13-204ENST00000478563 MEFVO15553 781 aaPredicted RBP8.05□□□□□ -1.12
CDK13-204ENST00000478563 MSCO60682 206 aa8.05□□□□□ -1.12
CDK13-204ENST00000478563 GDNFP39905 211 aa8.05□□□□□ -1.12
CDK13-204ENST00000478563 LSSP48449 732 aa8.05□□□□□ -1.12
CDK13-204ENST00000478563 CWF19L1Q69YN2 538 aaKnown RBP8.05□□□□□ -1.12
CDK13-204ENST00000478563 RSPO2Q6UXX9 243 aaPredicted RBP8.05□□□□□ -1.12
CDK13-204ENST00000478563 DGKHQ86XP1 1220 aa8.05□□□□□ -1.12
CDK13-204ENST00000478563 SAMD3Q8N6K7 520 aa8.05□□□□□ -1.12
CDK13-204ENST00000478563 BHLHE22Q8NFJ8 381 aaPredicted RBP8.05□□□□□ -1.12
CDK13-204ENST00000478563 CHTF18Q8WVB6 975 aa8.05□□□□□ -1.12
CDK13-204ENST00000478563 COPS5Q92905 334 aa8.05□□□□□ -1.12
CDK13-204ENST00000478563 ZFYVE21Q9BQ24 234 aa8.05□□□□□ -1.12
CDK13-204ENST00000478563 CABP5Q9NP86 173 aa8.05□□□□□ -1.12
CDK13-204ENST00000478563 C2orf71A6NGG8 1288 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 ARNTLO00327 626 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 SNUPNO95149 360 aaKnown RBP8.04□□□□□ -1.12
CDK13-204ENST00000478563 CKMP06732 381 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 SRFP11831 508 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 AFMP43652 599 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 KCNMB1Q16558 191 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 GAB4Q2WGN9 574 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 TMEM177Q53S58 311 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 ACBD5Q5T8D3 534 aaPredicted RBP8.04□□□□□ -1.12
CDK13-204ENST00000478563 CXorf57Q6NSI4 855 aaKnown RBP8.04□□□□□ -1.12
CDK13-204ENST00000478563 CRTC3Q6UUV7 619 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 C11orf74Q86VG3 221 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 PCDH19Q8TAB3 1148 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.04□□□□□ -1.12
CDK13-204ENST00000478563 AHCYL2Q96HN2 611 aaKnown RBP8.04□□□□□ -1.12
CDK13-204ENST00000478563 GPR27Q9NS67 375 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 OBP2AQ9NY56 170 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 ZSWIM5Q9P217 1185 aa8.04□□□□□ -1.12
CDK13-204ENST00000478563 BACE2Q9Y5Z0 518 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms