RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 RSPH10B2B2RC85 870 aa12.42□□□□□ -0.42
APTX-222ENST00000478279 RSPH10BP0C881 870 aa12.42□□□□□ -0.42
APTX-222ENST00000478279 SNHG28P0DPA3 235 aa12.42□□□□□ -0.42
APTX-222ENST00000478279 LTBRP36941 435 aa12.42□□□□□ -0.42
APTX-222ENST00000478279 LAMC2Q13753 1193 aa12.42□□□□□ -0.42
APTX-222ENST00000478279 USH1GQ495M9 461 aa12.42□□□□□ -0.42
APTX-222ENST00000478279 PLEKHG4Q58EX7 1191 aa12.42□□□□□ -0.42
APTX-222ENST00000478279 HERC4Q5GLZ8 1057 aaPredicted RBP12.42□□□□□ -0.42
APTX-222ENST00000478279 FBXO11Q86XK2 927 aa12.42□□□□□ -0.42
APTX-222ENST00000478279 SYTL5Q8TDW5 730 aaPredicted RBP12.42□□□□□ -0.42
APTX-222ENST00000478279 TBC1D5Q92609 795 aa12.42□□□□□ -0.42
APTX-222ENST00000478279 TOP1MTQ969P6 601 aa12.42□□□□□ -0.42
APTX-222ENST00000478279 POP1Q99575 1024 aaKnown RBP12.42□□□□□ -0.42
APTX-222ENST00000478279 TOMM22Q9NS69 142 aa12.42□□□□□ -0.42
APTX-222ENST00000478279 SPTBN4Q9H254 2564 aa12.42□□□□□ -0.42
APTX-222ENST00000478279 TTC41PQ6P2S7 1318 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 EIF3JO75822 258 aaKnown RBP12.41□□□□□ -0.42
APTX-222ENST00000478279 ZNF286BP0CG31 522 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 THPOP40225 353 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 HIC1Q14526 733 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 ALX1Q15699 326 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 SMAD2Q15796 467 aaKnown RBP12.41□□□□□ -0.42
APTX-222ENST00000478279 CTC1Q2NKJ3 1217 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 RRP12Q5JTH9 1297 aaKnown RBP12.41□□□□□ -0.42
APTX-222ENST00000478279 RPAINQ86UA6 219 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 SERINC5Q86VE9 423 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 DHX37Q8IY37 1157 aaKnown RBP12.41□□□□□ -0.42
APTX-222ENST00000478279 PPTC7Q8NI37 304 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 PI4K2BQ8TCG2 481 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 TTC14Q96N46 770 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 RMDN3Q96TC7 470 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 PHOX2BQ99453 314 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 COL20A1Q9P218 1284 aa12.41□□□□□ -0.42
APTX-222ENST00000478279 NLRC5Q86WI3 1866 aa12.4□□□□□ -0.42
APTX-222ENST00000478279 MYO15AQ9UKN7 3530 aa12.4□□□□□ -0.42
APTX-222ENST00000478279 PPFIA4O75335 1185 aa12.4□□□□□ -0.42
APTX-222ENST00000478279 UPP2O95045 317 aa12.4□□□□□ -0.42
APTX-222ENST00000478279 HOXD8P13378 290 aaPredicted RBP12.4□□□□□ -0.42
APTX-222ENST00000478279 GPATCH4Q5T3I0 446 aaKnown RBP12.4□□□□□ -0.42
APTX-222ENST00000478279 VPS53Q5VIR6 699 aa12.4□□□□□ -0.42
APTX-222ENST00000478279 BMP8AQ7Z5Y6 402 aa12.4□□□□□ -0.42
APTX-222ENST00000478279 PRSS33Q8NF86 280 aa12.4□□□□□ -0.42
APTX-222ENST00000478279 SEPT8Q92599 483 aa12.4□□□□□ -0.42
APTX-222ENST00000478279 EDAQ92838 391 aa12.4□□□□□ -0.42
APTX-222ENST00000478279 MUTYHQ9UIF7 546 aa12.4□□□□□ -0.42
APTX-222ENST00000478279 MRVI1Q9Y6F6 885 aa12.4□□□□□ -0.42
APTX-222ENST00000478279 PTPRZ1P23471 2315 aaPredicted RBP12.4□□□□□ -0.42
APTX-222ENST00000478279 ABCB11O95342 1321 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 COL4A6Q14031 1691 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.39□□□□□ -0.43
APTX-222ENST00000478279 MBTPS2O43462 519 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 ST18O60284 1047 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 RB1P06400 928 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 PTPN5P54829 565 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 PKN1Q16512 942 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 ARHGEF16Q5VV41 709 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 MYSM1Q5VVJ2 828 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 MCF2L2Q86YR7 1114 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 RNF135Q8IUD6 432 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 PRRX2Q99811 253 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 UBA5Q9GZZ9 404 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 LMAN2LQ9H0V9 348 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 RALGAPA2Q2PPJ7 1873 aa12.39□□□□□ -0.43
APTX-222ENST00000478279 C5orf67F2Z3F1 127 aa12.38□□□□□ -0.43
APTX-222ENST00000478279 FGAP02671 866 aa12.38□□□□□ -0.43
APTX-222ENST00000478279 NR3C2P08235 984 aa12.38□□□□□ -0.43
APTX-222ENST00000478279 GOLGA8HP0CJ92 632 aa12.38□□□□□ -0.43
APTX-222ENST00000478279 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
APTX-222ENST00000478279 DLX2Q07687 328 aaPredicted RBP12.38□□□□□ -0.43
APTX-222ENST00000478279 HYAL1Q12794 435 aa12.38□□□□□ -0.43
APTX-222ENST00000478279 SMAD4Q13485 552 aaKnown RBP12.38□□□□□ -0.43
APTX-222ENST00000478279 CLUL1Q15846 466 aa12.38□□□□□ -0.43
APTX-222ENST00000478279 FIBCD1Q8N539 461 aa12.38□□□□□ -0.43
APTX-222ENST00000478279 ATP6V0A1Q93050 837 aa12.38□□□□□ -0.43
APTX-222ENST00000478279 IL17RAQ96F46 866 aa12.38□□□□□ -0.43
APTX-222ENST00000478279 IFIH1Q9BYX4 1025 aaKnown RBP12.38□□□□□ -0.43
APTX-222ENST00000478279 CPVLQ9H3G5 476 aa12.38□□□□□ -0.43
APTX-222ENST00000478279 C17orf102A2RUQ5 167 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 STXBP3O00186 592 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 CAND2O75155 1236 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 CTNNB1P35222 781 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 BMPR1AP36894 532 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 CDC37Q16543 378 aaPredicted RBP12.37□□□□□ -0.43
APTX-222ENST00000478279 HSDL1Q3SXM5 330 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 CELF3Q5SZQ8 465 aaKnown RBP12.37□□□□□ -0.43
APTX-222ENST00000478279 IER5LQ5T953 404 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 KCNV1Q6PIU1 500 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 TRIM67Q6ZTA4 783 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 APBB2Q92870 758 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 PBXIP1Q96AQ6 731 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 SPATA33Q96N06 139 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 C16orf70Q9BSU1 422 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 PXMP2Q9NR77 195 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 MRPL11Q9Y3B7 192 aaKnown RBP12.37□□□□□ -0.43
APTX-222ENST00000478279 RIF1Q5UIP0 2472 aaKnown RBP12.37□□□□□ -0.43
APTX-222ENST00000478279 ATG2AQ2TAZ0 1938 aa12.37□□□□□ -0.43
APTX-222ENST00000478279 TMEM221A6NGB7 291 aa12.36□□□□□ -0.43
APTX-222ENST00000478279 M0R296 226 aa12.36□□□□□ -0.43
APTX-222ENST00000478279 GRM6O15303 877 aa12.36□□□□□ -0.43
APTX-222ENST00000478279 TREHO43280 583 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms