RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 LRIT3Q3SXY7 679 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 FAM47CQ5HY64 1035 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 MYSM1Q5VVJ2 828 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 WWC2Q6AWC2 1192 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 MFSD5Q6N075 450 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 GPKOWQ92917 476 aaPredicted RBP eCLIP17.29■□□□□ 0.36
SNX21-210ENST00000478230 GPRASP2Q96D09 838 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 SPATA33Q96N06 139 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 SENP7Q9BQF6 1050 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 RNF26Q9BY78 433 aaPredicted RBP17.29■□□□□ 0.36
SNX21-210ENST00000478230 ALDH8A1Q9H2A2 487 aaPredicted RBP17.29■□□□□ 0.36
SNX21-210ENST00000478230 C6orf50Q9HD87 102 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 TBX21Q9UL17 535 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 PCDHA6Q9UN73 950 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 PCDHA8Q9Y5H6 950 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 SPATA31C2B4DYI2 1134 aa17.28■□□□□ 0.36
SNX21-210ENST00000478230 NOP56O00567 594 aaKnown RBP17.28■□□□□ 0.36
SNX21-210ENST00000478230 RGS20O76081 388 aa17.28■□□□□ 0.36
SNX21-210ENST00000478230 IFNAR1P17181 557 aa17.28■□□□□ 0.36
SNX21-210ENST00000478230 MRPS9P82933 396 aaKnown RBP17.28■□□□□ 0.36
SNX21-210ENST00000478230 NBPF20Q3BBV1 942 aa17.28■□□□□ 0.36
SNX21-210ENST00000478230 GPR153Q6NV75 609 aa17.28■□□□□ 0.36
SNX21-210ENST00000478230 CCDC148Q8NFR7 591 aa17.28■□□□□ 0.36
SNX21-210ENST00000478230 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
SNX21-210ENST00000478230 BICD2Q8TD16 824 aa17.28■□□□□ 0.36
SNX21-210ENST00000478230 HIPK3Q9H422 1215 aa17.28■□□□□ 0.36
SNX21-210ENST00000478230 NOD1Q9Y239 953 aa17.28■□□□□ 0.36
SNX21-210ENST00000478230 ESYT2A0FGR8 921 aa17.27■□□□□ 0.36
SNX21-210ENST00000478230 STXBP3O00186 592 aa17.27■□□□□ 0.36
SNX21-210ENST00000478230 SLC34A2O95436 690 aa17.27■□□□□ 0.36
SNX21-210ENST00000478230 PTGS1P23219 599 aa17.27■□□□□ 0.36
SNX21-210ENST00000478230 METTL7BQ6UX53 244 aa17.27■□□□□ 0.36
SNX21-210ENST00000478230 FAM177A1Q8N128 213 aaPredicted RBP17.27■□□□□ 0.36
SNX21-210ENST00000478230 CCDC155Q8N6L0 562 aa17.27■□□□□ 0.36
SNX21-210ENST00000478230 RTEL1Q9NZ71 1219 aa17.27■□□□□ 0.36
SNX21-210ENST00000478230 KIAA1217Q5T5P2 1943 aa17.27■□□□□ 0.35
SNX21-210ENST00000478230 GRIN2DO15399 1336 aa17.26■□□□□ 0.35
SNX21-210ENST00000478230 B4GALT4O60513 344 aa17.26■□□□□ 0.35
SNX21-210ENST00000478230 CDKL5O76039 1030 aa17.26■□□□□ 0.35
SNX21-210ENST00000478230 UBA1P22314 1058 aaKnown RBP17.26■□□□□ 0.35
SNX21-210ENST00000478230 SSRP1Q08945 709 aaKnown RBP17.26■□□□□ 0.35
SNX21-210ENST00000478230 TOB2Q14106 344 aaPredicted RBP17.26■□□□□ 0.35
SNX21-210ENST00000478230 UBE2SQ16763 222 aa17.26■□□□□ 0.35
SNX21-210ENST00000478230 SESTD1Q86VW0 696 aa17.26■□□□□ 0.35
SNX21-210ENST00000478230 RPUSD2Q8IZ73 545 aaKnown RBP17.26■□□□□ 0.35
SNX21-210ENST00000478230 C7orf31Q8N865 590 aa17.26■□□□□ 0.35
SNX21-210ENST00000478230 RETREG2Q8NC44 543 aa17.26■□□□□ 0.35
SNX21-210ENST00000478230 UPF3BQ9BZI7 483 aaKnown RBP17.26■□□□□ 0.35
SNX21-210ENST00000478230 MTIF3Q9H2K0 278 aaKnown RBP17.26■□□□□ 0.35
SNX21-210ENST00000478230 SH3GLB2Q9NR46 395 aa17.26■□□□□ 0.35
SNX21-210ENST00000478230 HOXD8P13378 290 aaPredicted RBP17.25■□□□□ 0.35
SNX21-210ENST00000478230 CHMP4BP1P59074 171 aa17.25■□□□□ 0.35
SNX21-210ENST00000478230 CCT2P78371 535 aaKnown RBP17.25■□□□□ 0.35
SNX21-210ENST00000478230 BFSP2Q13515 415 aa17.25■□□□□ 0.35
SNX21-210ENST00000478230 SLC26A6Q9BXS9 759 aa17.25■□□□□ 0.35
SNX21-210ENST00000478230 ZMYND12Q9H0C1 365 aa17.25■□□□□ 0.35
SNX21-210ENST00000478230 TRPV6Q9H1D0 765 aa17.25■□□□□ 0.35
SNX21-210ENST00000478230 SLKQ9H2G2 1235 aaPredicted RBP17.25■□□□□ 0.35
SNX21-210ENST00000478230 UBIAD1Q9Y5Z9 338 aa17.25■□□□□ 0.35
SNX21-210ENST00000478230 ZNF76P36508 570 aa17.24■□□□□ 0.35
SNX21-210ENST00000478230 PSEN2P49810 448 aa17.24■□□□□ 0.35
SNX21-210ENST00000478230 MTMR1Q13613 665 aa17.24■□□□□ 0.35
SNX21-210ENST00000478230 PSRC1Q6PGN9 363 aaPredicted RBP17.24■□□□□ 0.35
SNX21-210ENST00000478230 C22orf23Q9BZE7 217 aa17.24■□□□□ 0.35
SNX21-210ENST00000478230 PPP1R12CQ9BZL4 782 aa17.24■□□□□ 0.35
SNX21-210ENST00000478230 JADE2Q9NQC1 790 aa17.24■□□□□ 0.35
SNX21-210ENST00000478230 ZNF215Q9UL58 517 aaPredicted RBP17.24■□□□□ 0.35
SNX21-210ENST00000478230 DEXIO95424 95 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 PARNO95453 639 aaKnown RBP17.23■□□□□ 0.35
SNX21-210ENST00000478230 F2P00734 622 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 PFKMP08237 780 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 XBP1P17861 261 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 ITGB8P26012 769 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 SP2Q02086 613 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 MFSD10Q14728 455 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 SHHQ15465 462 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 NTRK3Q16288 839 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 PTGISQ16647 500 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 KIAA0753Q2KHM9 967 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 HSDL1Q3SXM5 330 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 CYFIP1Q7L576 1253 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 REXO1Q8N1G1 1221 aaKnown RBP17.23■□□□□ 0.35
SNX21-210ENST00000478230 TNPO1Q92973 898 aaKnown RBP17.23■□□□□ 0.35
SNX21-210ENST00000478230 ZFP91Q96JP5 570 aaPredicted RBP17.23■□□□□ 0.35
SNX21-210ENST00000478230 MXRA8Q9BRK3 442 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 NOC4LQ9BVI4 516 aaKnown RBP17.23■□□□□ 0.35
SNX21-210ENST00000478230 ANO3Q9BYT9 981 aa17.23■□□□□ 0.35
SNX21-210ENST00000478230 PITPNM1O00562 1244 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 GNAT1P11488 350 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 CYP2C18P33260 490 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 RFC2P35250 354 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 SREBF1P36956 1147 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 CLK2P49760 499 aaKnown RBP17.22■□□□□ 0.35
SNX21-210ENST00000478230 PKN1Q16512 942 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 GALNT17Q6IS24 598 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 NIPA1Q7RTP0 329 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 CAGE1Q8TC20 777 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 KAT2BQ92831 832 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 PHKBQ93100 1093 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 IL17RAQ96F46 866 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms