RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 TLR3O15455 904 aaKnown RBP9.57□□□□□ -0.88
ERCC8-205ENST00000477893 NR3C2P08235 984 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 EPHB4P54760 987 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 FPGSQ05932 587 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 PWP2Q15269 919 aaKnown RBP9.57□□□□□ -0.88
ERCC8-205ENST00000477893 SHHQ15465 462 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 BRDTQ58F21 947 aaPredicted RBP9.57□□□□□ -0.88
ERCC8-205ENST00000477893 SYNE3Q6ZMZ3 975 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 Q7L0L9 218 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 ANKRD33Q7Z3H0 272 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 HEATR3Q7Z4Q2 680 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 FAM126BQ8IXS8 530 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 AFG1LQ8WV93 481 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 GPKOWQ92917 476 aaPredicted RBP eCLIP9.57□□□□□ -0.88
ERCC8-205ENST00000477893 JAKMIP1Q96N16 626 aaKnown RBP9.57□□□□□ -0.88
ERCC8-205ENST00000477893 PDCD2LQ9BRP1 358 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 TRMT13Q9NUP7 481 aaKnown RBP9.57□□□□□ -0.88
ERCC8-205ENST00000477893 POLR3EQ9NVU0 708 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 RABGEF1Q9UJ41 708 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 BAZ2BQ9UIF8 2168 aaKnown RBP9.57□□□□□ -0.88
ERCC8-205ENST00000477893 GRIN2DO15399 1336 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 UMODL1Q5DID0 1318 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 KLF18A0A0U1RQI7 1052 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 GOLGA8AA7E2F4 631 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 GOLGA8BA8MQT2 603 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 KIAA0355O15063 1070 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 B4GALT4O60513 344 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 CABYRO75952 493 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 GH1P01241 217 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 CENPBP07199 599 aaPredicted RBP9.56□□□□□ -0.88
ERCC8-205ENST00000477893 CALM1P0DP23 149 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 CALM2P0DP24 149 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 CALM3P0DP25 149 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 ACRP10323 421 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 CCND2P30279 289 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 CYP2C18P33260 490 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 LIFRP42702 1097 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 CDK7P50613 346 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 PURAQ00577 322 aaKnown RBP9.56□□□□□ -0.88
ERCC8-205ENST00000477893 PGM5Q15124 567 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 UBE2SQ16763 222 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 USP17L6PQ6QN14 398 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 TMTC3Q6ZXV5 915 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 DHX32Q7L7V1 743 aaKnown RBP9.56□□□□□ -0.88
ERCC8-205ENST00000477893 TMTC2Q8N394 836 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 SMARCC2Q8TAQ2 1214 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 RNPC3Q96LT9 517 aaKnown RBP9.56□□□□□ -0.88
ERCC8-205ENST00000477893 FAM161BQ96MY7 647 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 TOX2Q96NM4 488 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 IWS1Q96ST2 819 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 MTG1Q9BT17 334 aaPredicted RBP9.56□□□□□ -0.88
ERCC8-205ENST00000477893 SPZ1Q9BXG8 430 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 TBX21Q9UL17 535 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 BRPF3Q9ULD4 1205 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 Q9Y3F1 56 aa9.56□□□□□ -0.88
ERCC8-205ENST00000477893 RBAK-RBAKDNI3L0D1 243 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 NKRFO15226 690 aaKnown RBP eCLIP9.55□□□□□ -0.88
ERCC8-205ENST00000477893 ZBTB43O43298 467 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 PPFIA3O75145 1194 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 EIF3JO75822 258 aaKnown RBP9.55□□□□□ -0.88
ERCC8-205ENST00000477893 TIMP1P01033 207 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 MMP3P08254 477 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 ZNF286BP0CG31 522 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 CYP2C9P11712 490 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 CSF2RAP15509 400 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 GNAQP50148 359 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 CCL23P55773 120 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 NKX3-2P78367 333 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 ARHGAP1Q07960 439 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 APOBRQ0VD83 1088 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 TRAF1Q13077 416 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 KRT32Q14532 448 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 RTN1Q16799 776 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 NBPF20Q3BBV1 942 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 PPP1R15BQ5SWA1 713 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 CCDC62Q6P9F0 684 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 APOA5Q6Q788 366 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 FANCBQ8NB91 859 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 CUL5Q93034 780 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 MAP3K14Q99558 947 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 LZTS2Q9BRK4 669 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 MTA3Q9BTC8 594 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 HIPK3Q9H422 1215 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 PPP4R2Q9NY27 417 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 RTEL1Q9NZ71 1219 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 NOD1Q9Y239 953 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 SNX14Q9Y5W7 946 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 CNTNAP5Q8WYK1 1306 aa9.55□□□□□ -0.88
ERCC8-205ENST00000477893 A6NJR5 290 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 REC8O95072 547 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 GGPS1O95749 300 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 CD4P01730 458 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 CASTP20810 708 aaKnown RBP9.54□□□□□ -0.88
ERCC8-205ENST00000477893 UBA1P22314 1058 aaKnown RBP9.54□□□□□ -0.88
ERCC8-205ENST00000477893 HSPA4P34932 840 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 EXOSC10Q01780 885 aaKnown RBP9.54□□□□□ -0.88
ERCC8-205ENST00000477893 SP4Q02446 784 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 LRIT3Q3SXY7 679 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 MFSD5Q6N075 450 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 BLOC1S2Q6QNY1 142 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms