RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 ZNF76P36508 570 aa22.66■■□□□ 1.22
ACTB-210ENST00000477812 SETQ01105 290 aaPredicted RBP22.66■■□□□ 1.22
ACTB-210ENST00000477812 PRR16Q569H4 304 aa22.66■■□□□ 1.22
ACTB-210ENST00000477812 MYSM1Q5VVJ2 828 aa22.66■■□□□ 1.22
ACTB-210ENST00000477812 IQSEC1Q6DN90 963 aa22.66■■□□□ 1.22
ACTB-210ENST00000477812 NLRX1Q86UT6 975 aa22.66■■□□□ 1.22
ACTB-210ENST00000477812 LENG1Q96BZ8 264 aaPredicted RBP22.66■■□□□ 1.22
ACTB-210ENST00000477812 HMX1Q9NP08 348 aaPredicted RBP22.66■■□□□ 1.22
ACTB-210ENST00000477812 DDX41Q9UJV9 622 aaKnown RBP22.66■■□□□ 1.22
ACTB-210ENST00000477812 FAM184BQ9ULE4 1060 aa22.66■■□□□ 1.22
ACTB-210ENST00000477812 GNEQ9Y223 722 aaKnown RBP22.66■■□□□ 1.22
ACTB-210ENST00000477812 F13A1P00488 732 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 TGFB3P10600 412 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 CCL5P13501 91 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 AKR1A1P14550 325 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 KCNA2P16389 499 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 PTGS1P23219 599 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 SP2Q02086 613 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 NBR1Q14596 966 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 TTLL4Q14679 1199 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 RILPL1Q5EBL4 403 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 TTC38Q5R3I4 469 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 PLA2G4DQ86XP0 818 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 CDHR1Q96JP9 859 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 NAP1L4Q99733 375 aaKnown RBP22.65■■□□□ 1.22
ACTB-210ENST00000477812 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.65■■□□□ 1.224e-14■■■□□ 15.2
ACTB-210ENST00000477812 ZSCAN16Q9H4T2 348 aaPredicted RBP22.65■■□□□ 1.22
ACTB-210ENST00000477812 AGO4Q9HCK5 861 aaKnown RBP22.65■■□□□ 1.22
ACTB-210ENST00000477812 DAXXQ9UER7 740 aaPredicted RBP22.65■■□□□ 1.22
ACTB-210ENST00000477812 DDX25Q9UHL0 483 aaKnown RBP22.65■■□□□ 1.22
ACTB-210ENST00000477812 NOL7Q9UMY1 257 aaKnown RBP22.65■■□□□ 1.22
ACTB-210ENST00000477812 MRVI1Q9Y6F6 885 aa22.65■■□□□ 1.22
ACTB-210ENST00000477812 POTEFA5A3E0 1075 aa22.64■■□□□ 1.21
ACTB-210ENST00000477812 MAFGO15525 162 aa22.64■■□□□ 1.21
ACTB-210ENST00000477812 CCNT1O60563 726 aaKnown RBP22.64■■□□□ 1.21
ACTB-210ENST00000477812 ATP9AO75110 1047 aa22.64■■□□□ 1.21
ACTB-210ENST00000477812 UBA1P22314 1058 aaKnown RBP22.64■■□□□ 1.21
ACTB-210ENST00000477812 DUSP28Q4G0W2 176 aa22.64■■□□□ 1.21
ACTB-210ENST00000477812 GJC2Q5T442 439 aaPredicted RBP22.64■■□□□ 1.21
ACTB-210ENST00000477812 FAM173BQ6P4H8 233 aa22.64■■□□□ 1.21
ACTB-210ENST00000477812 KCNV1Q6PIU1 500 aa22.64■■□□□ 1.21
ACTB-210ENST00000477812 ETNPPLQ8TBG4 499 aa22.64■■□□□ 1.21
ACTB-210ENST00000477812 KCNMB3Q9NPA1 279 aa22.64■■□□□ 1.21
ACTB-210ENST00000477812 DDX20Q9UHI6 824 aaKnown RBP22.64■■□□□ 1.21
ACTB-210ENST00000477812 TXNP10599 105 aaKnown RBP22.63■■□□□ 1.21
ACTB-210ENST00000477812 TNFAIP2Q03169 654 aa22.63■■□□□ 1.21
ACTB-210ENST00000477812 ITGB3BPQ13352 177 aaPredicted RBP22.63■■□□□ 1.21
ACTB-210ENST00000477812 ORC2Q13416 577 aaPredicted RBP22.63■■□□□ 1.21
ACTB-210ENST00000477812 LY6KQ17RY6 165 aa22.63■■□□□ 1.21
ACTB-210ENST00000477812 FOXD4L5Q5VV16 416 aaPredicted RBP22.63■■□□□ 1.21
ACTB-210ENST00000477812 LHX8Q68G74 356 aa22.63■■□□□ 1.21
ACTB-210ENST00000477812 FOXD4L4Q8WXT5 416 aaPredicted RBP22.63■■□□□ 1.21
ACTB-210ENST00000477812 SENP7Q9BQF6 1050 aa22.63■■□□□ 1.21
ACTB-210ENST00000477812 PCDHB6Q9Y5E3 794 aa22.63■■□□□ 1.21
ACTB-210ENST00000477812 FRMPD3Q5JV73 1810 aa22.62■■□□□ 1.21
ACTB-210ENST00000477812 MSH4O15457 936 aa22.62■■□□□ 1.21
ACTB-210ENST00000477812 DUSP11O75319 330 aaKnown RBP22.62■■□□□ 1.21
ACTB-210ENST00000477812 ATP2B1P20020 1258 aa22.62■■□□□ 1.21
ACTB-210ENST00000477812 CNGA1P29973 690 aa22.62■■□□□ 1.21
ACTB-210ENST00000477812 POTEDQ86YR6 584 aa22.62■■□□□ 1.21
ACTB-210ENST00000477812 COPS5Q92905 334 aa22.62■■□□□ 1.21
ACTB-210ENST00000477812 BCAS3Q9H6U6 928 aa22.62■■□□□ 1.21
ACTB-210ENST00000477812 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.62■■□□□ 1.21
ACTB-210ENST00000477812 CIZ1Q9ULV3 898 aaPredicted RBP22.62■■□□□ 1.21
ACTB-210ENST00000477812 IPO5O00410 1097 aaKnown RBP22.61■■□□□ 1.21
ACTB-210ENST00000477812 NKRFO15226 690 aaKnown RBP eCLIP22.61■■□□□ 1.212e-12■□□□□ 9.3
ACTB-210ENST00000477812 DHX15O43143 795 aaKnown RBP22.61■■□□□ 1.21
ACTB-210ENST00000477812 NEMFO60524 1076 aa22.61■■□□□ 1.21
ACTB-210ENST00000477812 MCM7P33993 719 aa22.61■■□□□ 1.21
ACTB-210ENST00000477812 NKX3-2P78367 333 aa22.61■■□□□ 1.21
ACTB-210ENST00000477812 ARHGAP1Q07960 439 aa22.61■■□□□ 1.21
ACTB-210ENST00000477812 HAS1Q92839 578 aa22.61■■□□□ 1.21
ACTB-210ENST00000477812 SLC5A5Q92911 643 aa22.61■■□□□ 1.21
ACTB-210ENST00000477812 EMID1Q96A84 441 aaPredicted RBP22.61■■□□□ 1.21
ACTB-210ENST00000477812 UPF3AQ9H1J1 476 aaKnown RBP22.61■■□□□ 1.21
ACTB-210ENST00000477812 TMEM60Q9H2L4 133 aa22.61■■□□□ 1.21
ACTB-210ENST00000477812 Q9Y3F1 56 aa22.61■■□□□ 1.21
ACTB-210ENST00000477812 MYH15Q9Y2K3 1946 aa22.61■■□□□ 1.21
ACTB-210ENST00000477812 NFASCO94856 1347 aa22.6■■□□□ 1.21
ACTB-210ENST00000477812 CTAGE5O15320 804 aa22.6■■□□□ 1.21
ACTB-210ENST00000477812 MSCO60682 206 aa22.6■■□□□ 1.21
ACTB-210ENST00000477812 MYCP01106 439 aaPredicted RBP22.6■■□□□ 1.21
ACTB-210ENST00000477812 NUCB2P80303 420 aa22.6■■□□□ 1.21
ACTB-210ENST00000477812 ZNF174Q15697 407 aa22.6■■□□□ 1.21
ACTB-210ENST00000477812 CELF3Q5SZQ8 465 aaKnown RBP22.6■■□□□ 1.21
ACTB-210ENST00000477812 ANO1Q5XXA6 986 aa22.6■■□□□ 1.21
ACTB-210ENST00000477812 C4orf32Q8N8J7 132 aa22.6■■□□□ 1.21
ACTB-210ENST00000477812 MTMR9Q96QG7 549 aa22.6■■□□□ 1.21
ACTB-210ENST00000477812 RNF208Q9H0X6 261 aa22.6■■□□□ 1.21
ACTB-210ENST00000477812 SYNRGQ9UMZ2 1314 aa22.59■■□□□ 1.21
ACTB-210ENST00000477812 TBX3O15119 743 aa22.59■■□□□ 1.21
ACTB-210ENST00000477812 ADAMTS4O75173 837 aa22.59■■□□□ 1.21
ACTB-210ENST00000477812 FARP2O94887 1054 aaPredicted RBP22.59■■□□□ 1.21
ACTB-210ENST00000477812 GGPS1O95749 300 aa22.59■■□□□ 1.21
ACTB-210ENST00000477812 RARBP10826 455 aa22.59■■□□□ 1.21
ACTB-210ENST00000477812 METTL7BQ6UX53 244 aa22.59■■□□□ 1.21
ACTB-210ENST00000477812 TLK2Q86UE8 772 aa22.59■■□□□ 1.21
ACTB-210ENST00000477812 GJA10Q969M2 543 aa22.59■■□□□ 1.21
ACTB-210ENST00000477812 UIMC1Q96RL1 719 aa22.59■■□□□ 1.21
ACTB-210ENST00000477812 ZNF577Q9BSK1 485 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms