RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 COG2Q14746 738 aa13.29□□□□□ -0.28
TNRC6A-206ENST00000477487 ARID5BQ14865 1188 aa13.29□□□□□ -0.28
TNRC6A-206ENST00000477487 TRMT1LQ7Z2T5 733 aaKnown RBP13.29□□□□□ -0.28
TNRC6A-206ENST00000477487 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
TNRC6A-206ENST00000477487 KBTBD4Q9NVX7 518 aa13.29□□□□□ -0.28
TNRC6A-206ENST00000477487 WDR70Q9NW82 654 aa13.29□□□□□ -0.28
TNRC6A-206ENST00000477487 TMOD4Q9NZQ9 345 aa13.29□□□□□ -0.28
TNRC6A-206ENST00000477487 DOCK5Q9H7D0 1870 aa13.29□□□□□ -0.28
TNRC6A-206ENST00000477487 MYMKA6NI61 221 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 RBAK-RBAKDNI3L0D1 243 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 TXLNAP40222 546 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 ZSCAN30Q86W11 494 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 TRIM5Q9C035 493 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 TXNRD2Q9NNW7 524 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 SAMSN1Q9NSI8 373 aaKnown RBP13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 VAV3Q9UKW4 847 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 KIAA1024Q9UPX6 916 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 LCTP09848 1927 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 PPP1R3GB7ZBB8 358 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 GTPBP6O43824 516 aaPredicted RBP13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 ZBED4O75132 1171 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 RPN1P04843 607 aaKnown RBP13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 MYCLP12524 364 aaPredicted RBP13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 IREB2P48200 963 aaKnown RBP13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 MOGSQ13724 837 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 KMT5BQ4FZB7 885 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 PLA2G4DQ86XP0 818 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 PAGR1Q9BTK6 254 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 FGFBP2Q9BYJ0 223 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 WRAP73Q9P2S5 460 aaPredicted RBP13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 CTDP1Q9Y5B0 961 aaPredicted RBP13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 SCN4AP35499 1836 aa13.28□□□□□ -0.28
TNRC6A-206ENST00000477487 TRIM49BA6NDI0 452 aa13.27□□□□□ -0.28
TNRC6A-206ENST00000477487 C19orf81C9J6K1 198 aa13.27□□□□□ -0.28
TNRC6A-206ENST00000477487 GOLGA6L19H0YKK7 550 aa13.27□□□□□ -0.28
TNRC6A-206ENST00000477487 SSBP05455 408 aaKnown RBP eCLIP13.27□□□□□ -0.28
TNRC6A-206ENST00000477487 CIITAP33076 1130 aa13.27□□□□□ -0.28
TNRC6A-206ENST00000477487 CCT6AP40227 531 aaKnown RBP13.27□□□□□ -0.28
TNRC6A-206ENST00000477487 PMS1P54277 932 aaKnown RBP13.27□□□□□ -0.28
TNRC6A-206ENST00000477487 FAM193AP78312 1265 aa13.27□□□□□ -0.28
TNRC6A-206ENST00000477487 Q4G0T1 1027 aa13.27□□□□□ -0.28
TNRC6A-206ENST00000477487 GINM1Q9NU53 330 aa13.27□□□□□ -0.28
TNRC6A-206ENST00000477487 ADAMTS5Q9UNA0 930 aa13.27□□□□□ -0.28
TNRC6A-206ENST00000477487 ASTN1O14525 1302 aa13.27□□□□□ -0.28
TNRC6A-206ENST00000477487 NKRFO15226 690 aaKnown RBP eCLIP13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 FOSP01100 380 aaPredicted RBP13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 SPATA31C1P0DKV0 1188 aa13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 GCFC2P16383 781 aaKnown RBP13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 ZNF75DP51815 510 aa13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 CNTN2Q02246 1040 aa13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 TMEM266Q2M3C6 531 aa13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 CCDC144BQ3MJ40 725 aa13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 CATSPER3Q86XQ3 398 aa13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 ANKRD13AQ8IZ07 590 aa13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 SH2D3AQ9BRG2 576 aa13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 GLT8D2Q9H1C3 349 aa13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 DNAH12Q6ZR08 3092 aa13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 RBBP6Q7Z6E9 1792 aaKnown RBP13.27□□□□□ -0.29
TNRC6A-206ENST00000477487 ATP9AO75110 1047 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 CTTNQ14247 550 aaKnown RBP13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 Q3C1V9 767 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 SH3D19Q5HYK7 790 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 RNF207Q6ZRF8 634 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 C17orf53Q8N3J3 647 aaPredicted RBP13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 AK8Q96MA6 479 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 TRIM9Q9C026 710 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 CCDC39Q9UFE4 941 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 CTNND2Q9UQB3 1225 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 PTMAP06454 111 aaKnown RBP13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 CYP3A4P08684 503 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 CYP2C8P10632 490 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 STK4Q13043 487 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 CEP55Q53EZ4 464 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 HS1BP3Q53T59 392 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 A1CFQ9NQ94 594 aaKnown RBP13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 SPDYE5A6NIY4 337 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 MSNP26038 577 aaKnown RBP13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 PRCPP42785 496 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 ASIC1P78348 528 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 ITGB3BPQ13352 177 aaPredicted RBP13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 TMEM119Q4V9L6 283 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 KRT79Q5XKE5 535 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 KANK3Q6NY19 840 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 ERO1BQ86YB8 467 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 ELOA2Q8IYF1 753 aaPredicted RBP13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 PIGOQ8TEQ8 1089 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 RMDN3Q96TC7 470 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 ASCC2Q9H1I8 757 aaPredicted RBP13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 TBC1D7Q9P0N9 293 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 IFNKQ9P0W0 207 aa13.26□□□□□ -0.29
TNRC6A-206ENST00000477487 A0A0G2JLL6 359 aaPredicted RBP13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 TMEM150BA6NC51 233 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 PTGS1P23219 599 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 PDIA5Q14554 519 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 PGM5Q15124 567 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 PRRT2Q7Z6L0 340 aaPredicted RBP13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 LARP4BQ92615 738 aaKnown RBP13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 RAD54LQ92698 747 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 CALML4Q96GE6 196 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms