RNA–Protein interactions for RNA: ENST00000477109.1

KDM5C-211, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 297 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-211ENST00000477109 ZNF713Q8N859 430 aaPredicted RBP13.05□□□□□ -0.32
KDM5C-211ENST00000477109 VWCEQ96DN2 955 aa13.05□□□□□ -0.32
KDM5C-211ENST00000477109 WDR11Q9BZH6 1224 aa13.05□□□□□ -0.32
KDM5C-211ENST00000477109 VAT1LQ9HCJ6 419 aa13.05□□□□□ -0.32
KDM5C-211ENST00000477109 SH2B1Q9NRF2 756 aaPredicted RBP13.05□□□□□ -0.32
KDM5C-211ENST00000477109 ABCB11O95342 1321 aa13.05□□□□□ -0.32
KDM5C-211ENST00000477109 CNTNAP5Q8WYK1 1306 aa13.05□□□□□ -0.32
KDM5C-211ENST00000477109 LCTP09848 1927 aa13.05□□□□□ -0.32
KDM5C-211ENST00000477109 NFIBO00712 420 aa13.04□□□□□ -0.32
KDM5C-211ENST00000477109 CPLX1O14810 134 aa13.04□□□□□ -0.32
KDM5C-211ENST00000477109 MYL3P08590 195 aa13.04□□□□□ -0.32
KDM5C-211ENST00000477109 ATP2A2P16615 1042 aaKnown RBP13.04□□□□□ -0.32
KDM5C-211ENST00000477109 TTLL4Q14679 1199 aa13.04□□□□□ -0.32
KDM5C-211ENST00000477109 SLC35G1Q2M3R5 365 aa13.04□□□□□ -0.32
KDM5C-211ENST00000477109 DEFB128Q7Z7B8 93 aa13.04□□□□□ -0.32
KDM5C-211ENST00000477109 TEX2Q8IWB9 1127 aa13.04□□□□□ -0.32
KDM5C-211ENST00000477109 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
KDM5C-211ENST00000477109 PIGSQ96S52 555 aa13.04□□□□□ -0.32
KDM5C-211ENST00000477109 UHRF1Q96T88 793 aaPredicted RBP13.04□□□□□ -0.32
KDM5C-211ENST00000477109 RNF26Q9BY78 433 aaPredicted RBP13.04□□□□□ -0.32
KDM5C-211ENST00000477109 POLR3EQ9NVU0 708 aa13.04□□□□□ -0.32
KDM5C-211ENST00000477109 ADD3Q9UEY8 706 aaKnown RBP13.04□□□□□ -0.32
KDM5C-211ENST00000477109 RAPGEFL1Q9UHV5 662 aa13.04□□□□□ -0.32
KDM5C-211ENST00000477109 PCDHA11Q9Y5I1 949 aa13.04□□□□□ -0.32
KDM5C-211ENST00000477109 PTPDC1A2A3K4 754 aa13.03□□□□□ -0.32
KDM5C-211ENST00000477109 PRPF3O43395 683 aaKnown RBP13.03□□□□□ -0.32
KDM5C-211ENST00000477109 SUPT20HL2P0C7V6 817 aa13.03□□□□□ -0.32
KDM5C-211ENST00000477109 CALML3P27482 149 aa13.03□□□□□ -0.32
KDM5C-211ENST00000477109 CCT2P78371 535 aaKnown RBP13.03□□□□□ -0.32
KDM5C-211ENST00000477109 PURAQ00577 322 aaKnown RBP13.03□□□□□ -0.32
KDM5C-211ENST00000477109 SCRN1Q12765 414 aa13.03□□□□□ -0.32
KDM5C-211ENST00000477109 ME3Q16798 604 aa13.03□□□□□ -0.32
KDM5C-211ENST00000477109 HOMER1Q86YM7 354 aa13.03□□□□□ -0.32
KDM5C-211ENST00000477109 TRIM22Q8IYM9 498 aa13.03□□□□□ -0.32
KDM5C-211ENST00000477109 CMTR1Q8N1G2 835 aaKnown RBP13.03□□□□□ -0.32
KDM5C-211ENST00000477109 SAMD3Q8N6K7 520 aa13.03□□□□□ -0.32
KDM5C-211ENST00000477109 OR6J1Q8NGC5 347 aa13.03□□□□□ -0.32
KDM5C-211ENST00000477109 PPP1R13LQ8WUF5 828 aa13.03□□□□□ -0.32
KDM5C-211ENST00000477109 GTF3C6Q969F1 213 aa13.03□□□□□ -0.32
KDM5C-211ENST00000477109 TSPYL2Q9H2G4 693 aaPredicted RBP13.03□□□□□ -0.32
KDM5C-211ENST00000477109 MRPL11Q9Y3B7 192 aaKnown RBP13.03□□□□□ -0.32
KDM5C-211ENST00000477109 RFXAPO00287 272 aa13.02□□□□□ -0.33
KDM5C-211ENST00000477109 PFKMP08237 780 aa13.02□□□□□ -0.33
KDM5C-211ENST00000477109 CPT1AP50416 773 aa13.02□□□□□ -0.33
KDM5C-211ENST00000477109 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.33
KDM5C-211ENST00000477109 STK3Q13188 491 aa13.02□□□□□ -0.33
KDM5C-211ENST00000477109 FAM47CQ5HY64 1035 aa13.02□□□□□ -0.33
KDM5C-211ENST00000477109 SLC30A10Q6XR72 485 aa13.02□□□□□ -0.33
KDM5C-211ENST00000477109 MCF2L2Q86YR7 1114 aa13.02□□□□□ -0.33
KDM5C-211ENST00000477109 FAM177A1Q8N128 213 aaPredicted RBP13.02□□□□□ -0.33
KDM5C-211ENST00000477109 NECAB3Q96P71 396 aaPredicted RBP13.02□□□□□ -0.33
KDM5C-211ENST00000477109 LARP6Q9BRS8 491 aaKnown RBP13.02□□□□□ -0.33
KDM5C-211ENST00000477109 MTG1Q9BT17 334 aaPredicted RBP13.02□□□□□ -0.33
KDM5C-211ENST00000477109 CERS4Q9HA82 394 aa13.02□□□□□ -0.33
KDM5C-211ENST00000477109 NCOA5Q9HCD5 579 aaKnown RBP13.02□□□□□ -0.33
KDM5C-211ENST00000477109 MAP3K20Q9NYL2 800 aaKnown RBP13.02□□□□□ -0.33
KDM5C-211ENST00000477109 PCDHA1Q9Y5I3 950 aa13.02□□□□□ -0.33
KDM5C-211ENST00000477109 RBM47A0AV96 593 aaKnown RBP13.01□□□□□ -0.33
KDM5C-211ENST00000477109 PPP1R11O60927 126 aaPredicted RBP13.01□□□□□ -0.33
KDM5C-211ENST00000477109 CA3P07451 260 aa13.01□□□□□ -0.33
KDM5C-211ENST00000477109 GHRHRQ02643 423 aa13.01□□□□□ -0.33
KDM5C-211ENST00000477109 TFF2Q03403 129 aa13.01□□□□□ -0.33
KDM5C-211ENST00000477109 SSRP1Q08945 709 aaKnown RBP13.01□□□□□ -0.33
KDM5C-211ENST00000477109 SKIV2LQ15477 1246 aaKnown RBP13.01□□□□□ -0.33
KDM5C-211ENST00000477109 PFKFB3Q16875 520 aaPredicted RBP13.01□□□□□ -0.33
KDM5C-211ENST00000477109 NBPF20Q3BBV1 942 aa13.01□□□□□ -0.33
KDM5C-211ENST00000477109 USH1GQ495M9 461 aa13.01□□□□□ -0.33
KDM5C-211ENST00000477109 PPP1R18Q6NYC8 613 aa13.01□□□□□ -0.33
KDM5C-211ENST00000477109 RNF207Q6ZRF8 634 aa13.01□□□□□ -0.33
KDM5C-211ENST00000477109 CCDC82Q8N4S0 544 aa13.01□□□□□ -0.33
KDM5C-211ENST00000477109 CLEC4DQ8WXI8 215 aa13.01□□□□□ -0.33
KDM5C-211ENST00000477109 COPS5Q92905 334 aa13.01□□□□□ -0.33
KDM5C-211ENST00000477109 LLPHQ9BRT6 129 aaKnown RBP13.01□□□□□ -0.33
KDM5C-211ENST00000477109 V9GY48 417 aaPredicted RBP13.01□□□□□ -0.33
KDM5C-211ENST00000477109 STK36Q9NRP7 1315 aa13.01□□□□□ -0.33
KDM5C-211ENST00000477109 TCF20Q9UGU0 1960 aaKnown RBP13.01□□□□□ -0.33
KDM5C-211ENST00000477109 SCN5AQ14524 2016 aa13.01□□□□□ -0.33
KDM5C-211ENST00000477109 CHD9Q3L8U1 2897 aa13□□□□□ -0.33
KDM5C-211ENST00000477109 LOC102724159A0A0B4J2E5 919 aa13□□□□□ -0.33
KDM5C-211ENST00000477109 DEXIO95424 95 aa13□□□□□ -0.33
KDM5C-211ENST00000477109 LARGE1O95461 756 aa13□□□□□ -0.33
KDM5C-211ENST00000477109 ACTN1P12814 892 aa13□□□□□ -0.33
KDM5C-211ENST00000477109 BMP1P13497 986 aa13□□□□□ -0.33
KDM5C-211ENST00000477109 SCG2P13521 617 aa13□□□□□ -0.33
KDM5C-211ENST00000477109 PDE4DQ08499 809 aa13□□□□□ -0.33
KDM5C-211ENST00000477109 PWP2Q15269 919 aaKnown RBP13□□□□□ -0.33
KDM5C-211ENST00000477109 BRDTQ58F21 947 aaPredicted RBP13□□□□□ -0.33
KDM5C-211ENST00000477109 RETREG2Q8NC44 543 aa13□□□□□ -0.33
KDM5C-211ENST00000477109 CCDC12Q8WUD4 166 aaPredicted RBP13□□□□□ -0.33
KDM5C-211ENST00000477109 GLT8D2Q9H1C3 349 aa13□□□□□ -0.33
KDM5C-211ENST00000477109 NKRFO15226 690 aaKnown RBP eCLIP12.99□□□□□ -0.33
KDM5C-211ENST00000477109 IQCF3P0C7M6 154 aa12.99□□□□□ -0.33
KDM5C-211ENST00000477109 KCNQ1P51787 676 aa12.99□□□□□ -0.33
KDM5C-211ENST00000477109 CHMP4BP1P59074 171 aa12.99□□□□□ -0.33
KDM5C-211ENST00000477109 RPS6P62753 249 aaKnown RBP12.99□□□□□ -0.33
KDM5C-211ENST00000477109 WASF1Q92558 559 aa12.99□□□□□ -0.33
KDM5C-211ENST00000477109 PHKBQ93100 1093 aa12.99□□□□□ -0.33
KDM5C-211ENST00000477109 SNX21Q969T3 373 aa12.99□□□□□ -0.33
KDM5C-211ENST00000477109 TMX3Q96JJ7 454 aa12.99□□□□□ -0.33
KDM5C-211ENST00000477109 SLC9A7Q96T83 725 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms