RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 DCP1AQ9NPI6 582 aaPredicted RBP9.53□□□□□ -0.88
CHD6-207ENST00000476641 ECHDC1Q9NTX5 307 aa9.53□□□□□ -0.88
CHD6-207ENST00000476641 MCM9Q9NXL9 1143 aa9.53□□□□□ -0.88
CHD6-207ENST00000476641 GABRQQ9UN88 632 aa9.53□□□□□ -0.88
CHD6-207ENST00000476641 RAXQ9Y2V3 346 aa9.53□□□□□ -0.88
CHD6-207ENST00000476641 PHIPQ8WWQ0 1821 aa9.53□□□□□ -0.88
CHD6-207ENST00000476641 CDK5RAP2Q96SN8 1893 aa9.53□□□□□ -0.88
CHD6-207ENST00000476641 OPLAHO14841 1288 aa9.52□□□□□ -0.89
CHD6-207ENST00000476641 GHRHP01286 108 aa9.52□□□□□ -0.89
CHD6-207ENST00000476641 POLR3DP05423 398 aaPredicted RBP9.52□□□□□ -0.89
CHD6-207ENST00000476641 PSAPP07602 524 aa9.52□□□□□ -0.89
CHD6-207ENST00000476641 EN2P19622 333 aaPredicted RBP9.52□□□□□ -0.89
CHD6-207ENST00000476641 GABPAQ06546 454 aa9.52□□□□□ -0.89
CHD6-207ENST00000476641 TATDN1Q6P1N9 297 aa9.52□□□□□ -0.89
CHD6-207ENST00000476641 MAP4K3Q8IVH8 894 aa9.52□□□□□ -0.89
CHD6-207ENST00000476641 VTI1AQ96AJ9 217 aa9.52□□□□□ -0.89
CHD6-207ENST00000476641 ARMC5Q96C12 935 aa9.52□□□□□ -0.89
CHD6-207ENST00000476641 ZNF333Q96JL9 665 aa9.52□□□□□ -0.89
CHD6-207ENST00000476641 WDR18Q9BV38 432 aa9.52□□□□□ -0.89
CHD6-207ENST00000476641 CRNKL1Q9BZJ0 848 aaKnown RBP9.52□□□□□ -0.89
CHD6-207ENST00000476641 ASCC2Q9H1I8 757 aaPredicted RBP9.52□□□□□ -0.89
CHD6-207ENST00000476641 SERPINB13Q9UIV8 391 aa9.52□□□□□ -0.89
CHD6-207ENST00000476641 GSC2O15499 205 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 MED26O95402 600 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 TGFB1P01137 390 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 ASNSP08243 561 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 BACE1P56817 501 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 KIF22Q14807 665 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 SEPT2Q15019 361 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 RAB3GAP1Q15042 981 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 SLC9C1Q4G0N8 1177 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 ANKMY2Q8IV38 441 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 RGL4Q8IZJ4 473 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 STK11IPQ8N1F8 1099 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 CMTR1Q8N1G2 835 aaKnown RBP9.51□□□□□ -0.89
CHD6-207ENST00000476641 EXOC6Q8TAG9 804 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 PI4K2BQ8TCG2 481 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 SMCR8Q8TEV9 937 aaPredicted RBP9.51□□□□□ -0.89
CHD6-207ENST00000476641 GLMNQ92990 594 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 OSBP2Q969R2 916 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 MYO19Q96H55 970 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 EHD4Q9H223 541 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 TXNRD2Q9NNW7 524 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 SRRDQ9UH36 339 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 OAS3Q9Y6K5 1087 aaKnown RBP9.51□□□□□ -0.89
CHD6-207ENST00000476641 CEP290O15078 2479 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 MYPNQ86TC9 1320 aa9.51□□□□□ -0.89
CHD6-207ENST00000476641 PTPRFP10586 1907 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 M0R2C6 588 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 MMP20O60882 483 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 IGSF3O75054 1194 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 COBLO75128 1261 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 IGLV1-40P01703 118 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 AKR1B1P15121 316 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 ABCB5Q2M3G0 1257 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 CERKLQ49MI3 558 aaPredicted RBP9.5□□□□□ -0.89
CHD6-207ENST00000476641 KIAA1755Q5JYT7 1200 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 TTC6Q86TZ1 520 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 SEC62Q99442 399 aaKnown RBP9.5□□□□□ -0.89
CHD6-207ENST00000476641 P2RX7Q99572 595 aaKnown RBP9.5□□□□□ -0.89
CHD6-207ENST00000476641 RBSNQ9H1K0 784 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 AS3MTQ9HBK9 375 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 STOML1Q9UBI4 398 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 SLC45A1Q9Y2W3 748 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 SLC4A4Q9Y6R1 1079 aa9.5□□□□□ -0.89
CHD6-207ENST00000476641 DDX60LQ5H9U9 1706 aaKnown RBP9.5□□□□□ -0.89
CHD6-207ENST00000476641 FOCADQ5VW36 1801 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 A0A1W2PRG0 241 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 KIAA1324LA8MWY0 1029 aaPredicted RBP9.49□□□□□ -0.89
CHD6-207ENST00000476641 USP17L15C9J2P7 530 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 USP17L10C9JJH3 530 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 USP17L13C9JLJ4 530 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 USP17L12C9JPN9 530 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 USP17L11C9JVI0 530 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 USP17L21D6R901 530 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 USP17L18D6R9N7 530 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 USP17L22D6RA61 530 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 USP17L17D6RBQ6 530 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 USP17L19D6RCP7 530 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 USP17L20D6RJB6 530 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 MPHOSPH10O00566 681 aaKnown RBP9.49□□□□□ -0.89
CHD6-207ENST00000476641 FCGRTP55899 365 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 USP17L24Q0WX57 530 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 UBE3CQ15386 1083 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 ANKRD45Q5TZF3 282 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 KBTBD3Q8NAB2 608 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 STRBPQ96SI9 672 aaKnown RBP9.49□□□□□ -0.89
CHD6-207ENST00000476641 FEZ1Q99689 392 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.49□□□□□ -0.892e-8■□□□□ 8.2
CHD6-207ENST00000476641 EPB41L4AQ9HCS5 686 aaPredicted RBP9.49□□□□□ -0.89
CHD6-207ENST00000476641 TMOD4Q9NZQ9 345 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 TRIM33Q9UPN9 1127 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 SALL3Q9BXA9 1300 aa9.49□□□□□ -0.89
CHD6-207ENST00000476641 ATAD5Q96QE3 1844 aa9.48□□□□□ -0.89
CHD6-207ENST00000476641 TNPO2O14787 897 aaKnown RBP9.48□□□□□ -0.89
CHD6-207ENST00000476641 RNF113AO15541 343 aaKnown RBP9.48□□□□□ -0.89
CHD6-207ENST00000476641 IGHDP01880 384 aa9.48□□□□□ -0.89
CHD6-207ENST00000476641 VCAM1P19320 739 aa9.48□□□□□ -0.89
CHD6-207ENST00000476641 WEE1P30291 646 aa9.48□□□□□ -0.89
CHD6-207ENST00000476641 FLT3LGP49771 235 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms