RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ENAHQ8N8S7 591 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-219ENST00000476625 TTC14Q96N46 770 aa13.99□□□□□ -0.17
HDAC6-219ENST00000476625 IL25Q9H293 177 aa13.99□□□□□ -0.17
HDAC6-219ENST00000476625 BRWD1Q9NSI6 2320 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 PI4K2BG5E9Z4 385 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 UPP2O95045 317 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 NR3C2P08235 984 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 THPOP40225 353 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 PTK7Q13308 1070 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 GPATCH4Q5T3I0 446 aaKnown RBP13.98□□□□□ -0.17
HDAC6-219ENST00000476625 B4GALNT3Q6L9W6 998 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 FBXO11Q86XK2 927 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 DHX37Q8IY37 1157 aaKnown RBP13.98□□□□□ -0.17
HDAC6-219ENST00000476625 RGS22Q8NE09 1264 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 FBXO22Q8NEZ5 403 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 ESR2Q92731 530 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 KAT14Q9H8E8 782 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 COL4A6Q14031 1691 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 NCOR1O75376 2440 aa13.98□□□□□ -0.17
HDAC6-219ENST00000476625 ABHD14A-ACY1A0A1B0GW23 586 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 GPR37L1O60883 481 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 GGPS1O95749 300 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 SDSP20132 328 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 UBA1P22314 1058 aaKnown RBP13.97□□□□□ -0.17
HDAC6-219ENST00000476625 IKBKEQ14164 716 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 LEXMQ3ZCV2 418 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 MYSM1Q5VVJ2 828 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 PTCRAQ6ISU1 281 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-219ENST00000476625 CWC27Q6UX04 472 aaKnown RBP13.97□□□□□ -0.17
HDAC6-219ENST00000476625 ALYREFQ86V81 257 aaKnown RBP13.97□□□□□ -0.17
HDAC6-219ENST00000476625 DGKHQ86XP1 1220 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 FAM178BQ8IXR5 827 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 PPTC7Q8NI37 304 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 ZSCAN10Q96SZ4 725 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-219ENST00000476625 PDCD2LQ9BRP1 358 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 C16orf70Q9BSU1 422 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 SENP2Q9HC62 589 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 ZSWIM5Q9P217 1185 aa13.97□□□□□ -0.17
HDAC6-219ENST00000476625 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-219ENST00000476625 B4DLN1 442 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 ZNF213O14771 459 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 TREHO43280 583 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 PARP1P09874 1014 aaKnown RBP13.96□□□□□ -0.17
HDAC6-219ENST00000476625 SSTR3P32745 418 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-219ENST00000476625 HSD17B4P51659 736 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 MRPL12P52815 198 aaKnown RBP13.96□□□□□ -0.17
HDAC6-219ENST00000476625 RRP1P56182 461 aaKnown RBP13.96□□□□□ -0.17
HDAC6-219ENST00000476625 PGM5Q15124 567 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 EPC2Q52LR7 807 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 TCEAL5Q5H9L2 206 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 EP400NLQ6ZTU2 488 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 TRIM50Q86XT4 487 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 GJD3Q8N144 294 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 EMID1Q96A84 441 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-219ENST00000476625 SPATA33Q96N06 139 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 UIMC1Q96RL1 719 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 IWS1Q96ST2 819 aa13.96□□□□□ -0.17
HDAC6-219ENST00000476625 MRPL11Q9Y3B7 192 aaKnown RBP13.96□□□□□ -0.17
HDAC6-219ENST00000476625 BAZ2BQ9UIF8 2168 aaKnown RBP13.96□□□□□ -0.18
HDAC6-219ENST00000476625 LOXHD1Q8IVV2 1947 aa13.96□□□□□ -0.18
HDAC6-219ENST00000476625 RSPH10B2B2RC85 870 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 EIF3JO75822 258 aaKnown RBP13.95□□□□□ -0.18
HDAC6-219ENST00000476625 RSPH10BP0C881 870 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 SMIM10L2AP0DMW4 78 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 SMIM10L2BP0DMW5 78 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 HTRA4P83105 476 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-219ENST00000476625 LAMC2Q13753 1193 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 CLUL1Q15846 466 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 ASPRV1Q53RT3 343 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 CELF3Q5SZQ8 465 aaKnown RBP13.95□□□□□ -0.18
HDAC6-219ENST00000476625 CYB5R4Q7L1T6 521 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 SERINC5Q86VE9 423 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 FCHSD1Q86WN1 690 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 HOMER1Q86YM7 354 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 MCF2L2Q86YR7 1114 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 KATNAL1Q9BW62 490 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 LMCD1Q9NZU5 365 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 ZBTB47Q9UFB7 747 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-219ENST00000476625 PNMA2Q9UL42 364 aa13.95□□□□□ -0.18
HDAC6-219ENST00000476625 GRXCR2A6NFK2 248 aa13.94□□□□□ -0.18
HDAC6-219ENST00000476625 AMHP03971 560 aa13.94□□□□□ -0.18
HDAC6-219ENST00000476625 LGALS2P05162 132 aa13.94□□□□□ -0.18
HDAC6-219ENST00000476625 HOXD8P13378 290 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-219ENST00000476625 PLEKHG4Q58EX7 1191 aa13.94□□□□□ -0.18
HDAC6-219ENST00000476625 SP7Q8TDD2 431 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-219ENST00000476625 PIBF1Q8WXW3 757 aa13.94□□□□□ -0.18
HDAC6-219ENST00000476625 ATP6V0A1Q93050 837 aa13.94□□□□□ -0.18
HDAC6-219ENST00000476625 PIGSQ96S52 555 aa13.94□□□□□ -0.18
HDAC6-219ENST00000476625 RNF41Q9H4P4 317 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-219ENST00000476625 MAD2L2Q9UI95 211 aa13.94□□□□□ -0.18
HDAC6-219ENST00000476625 PLXNA4Q9HCM2 1894 aa13.93□□□□□ -0.18
HDAC6-219ENST00000476625 GTF2F1P35269 517 aaKnown RBP eCLIP13.93□□□□□ -0.183e-6■■■■□ 25.9
HDAC6-219ENST00000476625 DLX2Q07687 328 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-219ENST00000476625 SEMA3FQ13275 785 aa13.93□□□□□ -0.18
HDAC6-219ENST00000476625 GPM6BQ13491 265 aa13.93□□□□□ -0.18
HDAC6-219ENST00000476625 IQCA1Q86XH1 822 aa13.93□□□□□ -0.18
HDAC6-219ENST00000476625 NEK9Q8TD19 979 aa13.93□□□□□ -0.18
HDAC6-219ENST00000476625 ZBTB10Q96DT7 871 aa13.93□□□□□ -0.18
HDAC6-219ENST00000476625 MRPL38Q96DV4 380 aaKnown RBP13.93□□□□□ -0.18
HDAC6-219ENST00000476625 AMNQ9BXJ7 453 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms