RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 RPUSD2Q8IZ73 545 aaKnown RBP11.72□□□□□ -0.53
CCM2-208ENST00000476594 C7orf31Q8N865 590 aa11.72□□□□□ -0.53
CCM2-208ENST00000476594 RETREG2Q8NC44 543 aa11.72□□□□□ -0.53
CCM2-208ENST00000476594 INPP4AQ96PE3 977 aaPredicted RBP11.72□□□□□ -0.53
CCM2-208ENST00000476594 MEIS2O14770 477 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 MAFGO15525 162 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 B4GALT4O60513 344 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 UBA1P22314 1058 aaKnown RBP11.71□□□□□ -0.53
CCM2-208ENST00000476594 APOBRQ0VD83 1088 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 AP3B2Q13367 1082 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 CELF3Q5SZQ8 465 aaKnown RBP11.71□□□□□ -0.53
CCM2-208ENST00000476594 RUFY3Q7L099 469 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 TRIM22Q8IYM9 498 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 CCDC148Q8NFR7 591 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 GPKOWQ92917 476 aaPredicted RBP eCLIP11.71□□□□□ -0.53
CCM2-208ENST00000476594 GPRASP2Q96D09 838 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 SENP7Q9BQF6 1050 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 TM6SF1Q9BZW5 370 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 BARHL2Q9NY43 387 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 BRPF3Q9ULD4 1205 aa11.71□□□□□ -0.53
CCM2-208ENST00000476594 V9GY48 417 aaPredicted RBP11.71□□□□□ -0.53
CCM2-208ENST00000476594 NID2Q14112 1375 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 CPLX1O14810 134 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 ABCB7O75027 752 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 PARNO95453 639 aaKnown RBP11.7□□□□□ -0.54
CCM2-208ENST00000476594 PTGS1P23219 599 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 GNA11P29992 359 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 RFC2P35250 354 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 SMAD3P84022 425 aaKnown RBP11.7□□□□□ -0.54
CCM2-208ENST00000476594 SHHQ15465 462 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 ZNF697Q5TEC3 545 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 MYSM1Q5VVJ2 828 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 WWC2Q6AWC2 1192 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 METTL7BQ6UX53 244 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 SESTD1Q86VW0 696 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 IL31RAQ8NI17 732 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 CAGE1Q8TC20 777 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 BICD2Q8TD16 824 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 NOC4LQ9BVI4 516 aaKnown RBP11.7□□□□□ -0.54
CCM2-208ENST00000476594 USP26Q9BXU7 913 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 AGXT2Q9BYV1 514 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 C6orf50Q9HD87 102 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 IL23AQ9NPF7 189 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 RIC8AQ9NPQ8 531 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 ZNF215Q9UL58 517 aaPredicted RBP11.7□□□□□ -0.54
CCM2-208ENST00000476594 SCN10AQ9Y5Y9 1956 aa11.7□□□□□ -0.54
CCM2-208ENST00000476594 GRIN2DO15399 1336 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 hCG_1642624A0A1W2PR95 340 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 SMCO2A6NFE2 343 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 SPATA31C2B4DYI2 1134 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 RGS20O76081 388 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 F2P00734 622 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 ACTN1P12814 892 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 SCG2P13521 617 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 ITGB8P26012 769 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 PSEN2P49810 448 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 ANAPC15P60006 121 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 MRPS9P82933 396 aaKnown RBP11.69□□□□□ -0.54
CCM2-208ENST00000476594 MTMR1Q13613 665 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 MFSD10Q14728 455 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 PTGISQ16647 500 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 PFKFB3Q16875 520 aaPredicted RBP11.69□□□□□ -0.54
CCM2-208ENST00000476594 KIAA0753Q2KHM9 967 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 FAM109BQ6ICB4 259 aaPredicted RBP11.69□□□□□ -0.54
CCM2-208ENST00000476594 TNPO1Q92973 898 aaKnown RBP11.69□□□□□ -0.54
CCM2-208ENST00000476594 LRCH3Q96II8 777 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 RNF26Q9BY78 433 aaPredicted RBP11.69□□□□□ -0.54
CCM2-208ENST00000476594 TRPV6Q9H1D0 765 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 TRMT13Q9NUP7 481 aaKnown RBP11.69□□□□□ -0.54
CCM2-208ENST00000476594 RTEL1Q9NZ71 1219 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 PCDHA6Q9UN73 950 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 PCDHA8Q9Y5H6 950 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 LAMA3Q16787 3333 aa11.69□□□□□ -0.54
CCM2-208ENST00000476594 TMEM265A0A087WTH1 108 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.68□□□□□ -0.54
CCM2-208ENST00000476594 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.68□□□□□ -0.54
CCM2-208ENST00000476594 ESYT2A0FGR8 921 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 STXBP3O00186 592 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 SOX1O00570 391 aaPredicted RBP11.68□□□□□ -0.54
CCM2-208ENST00000476594 PRPF3O43395 683 aaKnown RBP11.68□□□□□ -0.54
CCM2-208ENST00000476594 CDKL5O76039 1030 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 FGBP02675 491 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 GNAT1P11488 350 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 HOXD8P13378 290 aaPredicted RBP11.68□□□□□ -0.54
CCM2-208ENST00000476594 CPA1P15085 419 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 CSF2RAP15509 400 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 CDC27P30260 824 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 CYP2C18P33260 490 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 ADD1P35611 737 aaKnown RBP11.68□□□□□ -0.54
CCM2-208ENST00000476594 CCL23P55773 120 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 COL9A3Q14050 684 aaPredicted RBP11.68□□□□□ -0.54
CCM2-208ENST00000476594 ANKRD1Q15327 319 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 UBE2SQ16763 222 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 HSDL1Q3SXM5 330 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 C9orf50Q5SZB4 431 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 CYFIP1Q7L576 1253 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 DEFB123Q8N688 67 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 AFAP1L1Q8TED9 768 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms