RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 CD209Q9NNX6 404 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 TBK1Q9UHD2 729 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 SRPRBQ9Y5M8 271 aaKnown RBP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 MYO9BQ13459 2157 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 LRRC37A3O60309 1634 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 KIAA0100Q14667 2235 aaKnown RBP5.51□□□□□ -1.53
CCDC39-204ENST00000476379 FAM205AQ6ZU69 1335 aa5.51□□□□□ -1.53
CCDC39-204ENST00000476379 FGFR1OPO95684 399 aaKnown RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 VIMP08670 466 aaKnown RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 NF2P35240 595 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 SEC24CP53992 1094 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 GUCY1A3Q02108 690 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 SNX1Q13596 522 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 PTPAQ15257 358 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 CCDC38Q502W7 563 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 TCP11X2Q5H9J9 407 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 C9orf131Q5VYM1 1079 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 NSMFQ6X4W1 530 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 CPLX4Q7Z7G2 160 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 IKZF4Q9H2S9 585 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 RMND1Q9NWS8 449 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 STK38LQ9Y2H1 464 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 MORC2Q9Y6X9 1032 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 MRC1P22897 1456 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 C5P01031 1676 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 RTL9Q8NET4 1388 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 ABCA3Q99758 1704 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 LRRC53A6NM62 1247 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 LRRIQ3A6PVS8 624 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 IKBKBO14920 756 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 NKRFO15226 690 aaKnown RBP eCLIP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 PPP6R2O75170 966 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 TBCAO75347 108 aaKnown RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 HEXIM1O94992 359 aaKnown RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 VAV2P52735 878 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 KRT83P78385 493 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 GJB7Q6PEY0 223 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 CLEC4GQ6UXB4 293 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 GPBP1Q86WP2 473 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 MRFAP1Q9Y605 127 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 TACC3Q9Y6A5 838 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 FANCGO15287 622 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 EVI5O60447 810 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 EEF2P13639 858 aaKnown RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 CDC25BP30305 580 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 SLC1A4P43007 532 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 PTGER2P43116 358 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 SPAG1Q07617 926 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 KRT71Q3SY84 523 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 RC3H1Q5TC82 1133 aaKnown RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 ANKRD40Q6AI12 368 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 ENOX1Q8TC92 643 aaKnown RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 RABGGTAQ92696 567 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 KIFC2Q96AC6 838 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 CCDC114Q96M63 670 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 DDX47Q9H0S4 455 aaKnown RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 TAOK3Q9H2K8 898 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 NMRK2Q9NPI5 230 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 FAM217BQ9NTX9 383 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 GINS2Q9Y248 185 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 RGPD1P0DJD0 1748 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 GOLGA8IPA6NC78 632 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 GOLGA8JA6NMD2 632 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 YDJCA8MPS7 323 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 FOXP2O15409 715 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 AMPD3Q01432 767 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 PLCB3Q01970 1234 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 MAP2K1Q02750 393 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 UAP1Q16222 522 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 ATL3Q6DD88 541 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 TRIM65Q6PJ69 517 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 PPP1R16BQ96T49 567 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 SELENOOQ9BVL4 669 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 TMEM39BQ9GZU3 492 aa5.5□□□□□ -1.53
CCDC39-204ENST00000476379 DCP1AQ9NPI6 582 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-204ENST00000476379 POTEB3A0JP26 581 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 POTECB2RU33 542 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 CSF1RP07333 972 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 GNAT2P19087 354 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 TRADDQ15628 312 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 POTEBQ6S5H4 581 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 NIM1KQ8IY84 436 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 SUPT20HQ8NEM7 779 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 BAIAP2L1Q9UHR4 511 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 DMGDHQ9UI17 866 aaKnown RBP5.49□□□□□ -1.53
CCDC39-204ENST00000476379 ATP8A1Q9Y2Q0 1164 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 POTEFA5A3E0 1075 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 NFKBIEO00221 500 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 GFPT2O94808 682 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 OR52Z1P0C646 297 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 MYCLP12524 364 aaPredicted RBP5.49□□□□□ -1.53
CCDC39-204ENST00000476379 NPR1P16066 1061 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 CALML3P27482 149 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 CXCL9Q07325 125 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 ASIC2Q16515 512 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 PPP1R18Q6NYC8 613 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 POTEGQ6S5H5 508 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms