RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 TBCKQ8TEA7 893 aa33.68■■■□□ 2.98
HOXB3-208ENST00000476342 INTS4Q96HW7 963 aaKnown RBP33.68■■■□□ 2.98
HOXB3-208ENST00000476342 MXRA8Q9BRK3 442 aa33.68■■■□□ 2.98
HOXB3-208ENST00000476342 JADE2Q9NQC1 790 aa33.68■■■□□ 2.98
HOXB3-208ENST00000476342 MAFGO15525 162 aa33.67■■■□□ 2.98
HOXB3-208ENST00000476342 GH1P01241 217 aa33.67■■■□□ 2.98
HOXB3-208ENST00000476342 MTMR1Q13613 665 aa33.67■■■□□ 2.98
HOXB3-208ENST00000476342 SPATA31C2B4DYI2 1134 aa33.66■■■□□ 2.98
HOXB3-208ENST00000476342 CST5P28325 142 aaPredicted RBP33.66■■■□□ 2.98
HOXB3-208ENST00000476342 USP11P51784 963 aa33.66■■■□□ 2.98
HOXB3-208ENST00000476342 NKX3-2P78367 333 aa33.66■■■□□ 2.98
HOXB3-208ENST00000476342 COPS5Q92905 334 aa33.66■■■□□ 2.98
HOXB3-208ENST00000476342 BRDTQ58F21 947 aaPredicted RBP33.65■■■□□ 2.98
HOXB3-208ENST00000476342 KLHDC9Q8NEP7 349 aa33.65■■■□□ 2.98
HOXB3-208ENST00000476342 BTBD18B2RXH4 712 aa33.64■■■□□ 2.98
HOXB3-208ENST00000476342 UBA1P22314 1058 aaKnown RBP33.64■■■□□ 2.98
HOXB3-208ENST00000476342 SEMA3FQ13275 785 aa33.64■■■□□ 2.98
HOXB3-208ENST00000476342 NR5A1Q13285 461 aa33.64■■■□□ 2.98
HOXB3-208ENST00000476342 FSCN1Q16658 493 aaKnown RBP33.64■■■□□ 2.98
HOXB3-208ENST00000476342 GNASQ5JWF2 1037 aa33.64■■■□□ 2.98
HOXB3-208ENST00000476342 PIK3AP1Q6ZUJ8 805 aa33.64■■■□□ 2.98
HOXB3-208ENST00000476342 NIPA1Q7RTP0 329 aa33.64■■■□□ 2.98
HOXB3-208ENST00000476342 PCSK9Q8NBP7 692 aaKnown RBP33.64■■■□□ 2.98
HOXB3-208ENST00000476342 PTGS1P23219 599 aa33.63■■■□□ 2.97
HOXB3-208ENST00000476342 CIITAP33076 1130 aa33.63■■■□□ 2.97
HOXB3-208ENST00000476342 MNX1P50219 401 aaPredicted RBP33.63■■■□□ 2.97
HOXB3-208ENST00000476342 CPT1AP50416 773 aa33.63■■■□□ 2.97
HOXB3-208ENST00000476342 NEDD9Q14511 834 aa33.63■■■□□ 2.97
HOXB3-208ENST00000476342 DHX37Q8IY37 1157 aaKnown RBP33.63■■■□□ 2.97
HOXB3-208ENST00000476342 SENP7Q9BQF6 1050 aa33.63■■■□□ 2.97
HOXB3-208ENST00000476342 TSEN34Q9BSV6 310 aaKnown RBP33.63■■■□□ 2.97
HOXB3-208ENST00000476342 MYADML2A6NDP7 307 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 MEIS1O00470 390 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 ZEB2O60315 1214 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 GGPS1O95749 300 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 SETQ01105 290 aaPredicted RBP33.62■■■□□ 2.97
HOXB3-208ENST00000476342 INF2Q27J81 1249 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 NECAB2Q7Z6G3 386 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 GIMAP8Q8ND71 665 aaPredicted RBP33.62■■■□□ 2.97
HOXB3-208ENST00000476342 CYP2W1Q8TAV3 490 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 TNFRSF25Q93038 417 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 EMID1Q96A84 441 aaPredicted RBP33.62■■■□□ 2.97
HOXB3-208ENST00000476342 MOXD2PA6NHM9 499 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 FAM86B1E9PN63 330 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 FAM86B2P0C5J1 330 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 SP2Q02086 613 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 ARHGAP1Q07960 439 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 LAMC2Q13753 1193 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 GNL2Q13823 731 aaKnown RBP33.62■■■□□ 2.97
HOXB3-208ENST00000476342 DIS3LQ8TF46 1054 aaKnown RBP33.62■■■□□ 2.97
HOXB3-208ENST00000476342 PAWRQ96IZ0 340 aaKnown RBP33.62■■■□□ 2.97
HOXB3-208ENST00000476342 FOXP1Q9H334 677 aaPredicted RBP33.62■■■□□ 2.97
HOXB3-208ENST00000476342 MLXIPQ9HAP2 919 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 KCNH7Q9NS40 1196 aa33.62■■■□□ 2.97
HOXB3-208ENST00000476342 H3BQV1 296 aa33.61■■■□□ 2.97
HOXB3-208ENST00000476342 CTAGE5O15320 804 aa33.61■■■□□ 2.97
HOXB3-208ENST00000476342 BEX3Q00994 111 aa33.61■■■□□ 2.97
HOXB3-208ENST00000476342 CELF3Q5SZQ8 465 aaKnown RBP33.61■■■□□ 2.97
HOXB3-208ENST00000476342 IFFO2Q5TF58 517 aa33.61■■■□□ 2.97
HOXB3-208ENST00000476342 UBE2Q1Q7Z7E8 422 aa33.61■■■□□ 2.97
HOXB3-208ENST00000476342 NEK8Q86SG6 692 aa33.61■■■□□ 2.97
HOXB3-208ENST00000476342 PLA2G4DQ86XP0 818 aa33.61■■■□□ 2.97
HOXB3-208ENST00000476342 HSP90AA1P07900 732 aaKnown RBP33.6■■■□□ 2.97
HOXB3-208ENST00000476342 IRX5P78411 483 aaPredicted RBP33.6■■■□□ 2.97
HOXB3-208ENST00000476342 KCNA10Q16322 511 aa33.6■■■□□ 2.97
HOXB3-208ENST00000476342 MYSM1Q5VVJ2 828 aa33.6■■■□□ 2.97
HOXB3-208ENST00000476342 C11orf49Q9H6J7 331 aa33.6■■■□□ 2.97
HOXB3-208ENST00000476342 DOCK5Q9H7D0 1870 aa33.59■■■□□ 2.97
HOXB3-208ENST00000476342 IGLV3-22A0A075B6J6 115 aa33.59■■■□□ 2.97
HOXB3-208ENST00000476342 LARP1BQ659C4 914 aaKnown RBP33.59■■■□□ 2.97
HOXB3-208ENST00000476342 CCSAPQ6IQ19 270 aaPredicted RBP33.59■■■□□ 2.97
HOXB3-208ENST00000476342 MOXD1Q6UVY6 613 aa33.59■■■□□ 2.97
HOXB3-208ENST00000476342 METTL7BQ6UX53 244 aa33.59■■■□□ 2.97
HOXB3-208ENST00000476342 NAP1L4Q99733 375 aaKnown RBP33.59■■■□□ 2.97
HOXB3-208ENST00000476342 PHF24Q9UPV7 400 aa33.59■■■□□ 2.97
HOXB3-208ENST00000476342 A6NJR5 290 aa33.58■■■□□ 2.97
HOXB3-208ENST00000476342 KCNA2P16389 499 aa33.58■■■□□ 2.97
HOXB3-208ENST00000476342 PDCP20941 246 aa33.58■■■□□ 2.97
HOXB3-208ENST00000476342 PRR16Q569H4 304 aa33.58■■■□□ 2.97
HOXB3-208ENST00000476342 EARS2Q5JPH6 523 aaKnown RBP33.58■■■□□ 2.97
HOXB3-208ENST00000476342 ASGR1P07306 291 aa33.57■■■□□ 2.96
HOXB3-208ENST00000476342 ARP10275 920 aa33.57■■■□□ 2.96
HOXB3-208ENST00000476342 COL6A1P12109 1028 aa33.57■■■□□ 2.96
HOXB3-208ENST00000476342 ACLYP53396 1101 aa33.57■■■□□ 2.96
HOXB3-208ENST00000476342 LETM2Q2VYF4 491 aa33.57■■■□□ 2.96
HOXB3-208ENST00000476342 CYFIP1Q7L576 1253 aa33.57■■■□□ 2.96
HOXB3-208ENST00000476342 PPTC7Q8NI37 304 aa33.57■■■□□ 2.96
HOXB3-208ENST00000476342 AFG1LQ8WV93 481 aa33.57■■■□□ 2.96
HOXB3-208ENST00000476342 MKI67P46013 3256 aaKnown RBP33.57■■■□□ 2.96
HOXB3-208ENST00000476342 EDIL3O43854 480 aa33.56■■■□□ 2.96
HOXB3-208ENST00000476342 ATP9AO75110 1047 aa33.56■■■□□ 2.96
HOXB3-208ENST00000476342 RGS19P49795 217 aa33.56■■■□□ 2.96
HOXB3-208ENST00000476342 SPATA33Q96N06 139 aa33.56■■■□□ 2.96
HOXB3-208ENST00000476342 AGO4Q9HCK5 861 aaKnown RBP33.56■■■□□ 2.96
HOXB3-208ENST00000476342 FOXD4L1Q9NU39 408 aa33.56■■■□□ 2.96
HOXB3-208ENST00000476342 POLR3EQ9NVU0 708 aa33.56■■■□□ 2.96
HOXB3-208ENST00000476342 PKD2L1Q9P0L9 805 aa33.56■■■□□ 2.96
HOXB3-208ENST00000476342 CYP3A7-CYP3A51PA0A087WV96 503 aa33.55■■■□□ 2.96
HOXB3-208ENST00000476342 SORBS3O60504 671 aa33.55■■■□□ 2.96
HOXB3-208ENST00000476342 MMP3P08254 477 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms