RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 SH2B2O14492 632 aaPredicted RBP9.74□□□□□ -0.85
SATB1-213ENST00000476178 TLL1O43897 1013 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 BAIAP3O94812 1187 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 GGPS1O95749 300 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 SMARCA1P28370 1054 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 MRPS5P82675 430 aaKnown RBP9.74□□□□□ -0.85
SATB1-213ENST00000476178 PGM5Q15124 567 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 CELF3Q5SZQ8 465 aaKnown RBP9.74□□□□□ -0.85
SATB1-213ENST00000476178 MYSM1Q5VVJ2 828 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 NFXL1Q6ZNB6 911 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 LRRC8DQ7L1W4 858 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 SESTD1Q86VW0 696 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 HERC6Q8IVU3 1022 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 ZNF654Q8IZM8 581 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 TMTC2Q8N394 836 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 ATXN2LQ8WWM7 1075 aaKnown RBP9.74□□□□□ -0.85
SATB1-213ENST00000476178 ARNTL2Q8WYA1 636 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 EMID1Q96A84 441 aaPredicted RBP9.74□□□□□ -0.85
SATB1-213ENST00000476178 TMEM87BQ96K49 555 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 MYL10Q9BUA6 226 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 GTF2IRD1Q9UHL9 959 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 SCN10AQ9Y5Y9 1956 aa9.74□□□□□ -0.85
SATB1-213ENST00000476178 TTC28Q96AY4 2481 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 RFXAPO00287 272 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 NOP56O00567 594 aaKnown RBP9.73□□□□□ -0.85
SATB1-213ENST00000476178 RGS20O76081 388 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 DDAH1O94760 285 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 PARNO95453 639 aaKnown RBP9.73□□□□□ -0.85
SATB1-213ENST00000476178 TGFB3P10600 412 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 CKBP12277 381 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 KIF5BP33176 963 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 LIFRP42702 1097 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 ZNF200P98182 395 aaPredicted RBP9.73□□□□□ -0.85
SATB1-213ENST00000476178 EXOSC10Q01780 885 aaKnown RBP9.73□□□□□ -0.85
SATB1-213ENST00000476178 PTK7Q13308 1070 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 TSGA10IPQ3SY00 556 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 GNPTABQ3T906 1256 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 CASC1Q6TDU7 716 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 RASEFQ8IZ41 740 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 SRBD1Q8N5C6 995 aaKnown RBP9.73□□□□□ -0.85
SATB1-213ENST00000476178 IL31RAQ8NI17 732 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 CTCFLQ8NI51 663 aaPredicted RBP9.73□□□□□ -0.85
SATB1-213ENST00000476178 SMARCC2Q8TAQ2 1214 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 CUL5Q93034 780 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 RRP36Q96EU6 259 aaKnown RBP9.73□□□□□ -0.85
SATB1-213ENST00000476178 ASB2Q96Q27 587 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 SPZ1Q9BXG8 430 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 RTEL1Q9NZ71 1219 aa9.73□□□□□ -0.85
SATB1-213ENST00000476178 SEC63Q9UGP8 760 aaKnown RBP9.73□□□□□ -0.85
SATB1-213ENST00000476178 MYH6P13533 1939 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 CCDC69A6NI79 296 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 TNFRSF10AO00220 468 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 CDC45O75419 566 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 PLEKHA8P1O95397 391 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 F2P00734 622 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 UBA1P22314 1058 aaKnown RBP9.72□□□□□ -0.85
SATB1-213ENST00000476178 THPOP40225 353 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 SP2Q02086 613 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 IKBKEQ14164 716 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 HSDL1Q3SXM5 330 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 CNKSR3Q6P9H4 555 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 TMCO2Q7Z6W1 182 aaPredicted RBP9.72□□□□□ -0.85
SATB1-213ENST00000476178 SGMS1Q86VZ5 419 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 CMTR1Q8N1G2 835 aaKnown RBP9.72□□□□□ -0.85
SATB1-213ENST00000476178 DHX38Q92620 1227 aaKnown RBP9.72□□□□□ -0.85
SATB1-213ENST00000476178 GPKOWQ92917 476 aaPredicted RBP eCLIP9.72□□□□□ -0.85
SATB1-213ENST00000476178 CCDC136Q96JN2 1154 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 NEK1Q96PY6 1258 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 CTAGE1Q96RT6 745 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 LRRC2Q9BYS8 371 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 BAZ2BQ9UIF8 2168 aaKnown RBP9.72□□□□□ -0.85
SATB1-213ENST00000476178 SCN5AQ14524 2016 aa9.72□□□□□ -0.85
SATB1-213ENST00000476178 ABHD14A-ACY1A0A1B0GW23 586 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 C17orf102A2RUQ5 167 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 H3BRB1 525 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 HAS3O00219 553 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 NBNO60934 754 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 RXRAP19793 462 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 GNAQP50148 359 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 WDR5P61964 334 aaKnown RBP9.71□□□□□ -0.86
SATB1-213ENST00000476178 SP4Q02446 784 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 TAP1Q03518 808 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 NEDD9Q14511 834 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 AAK1Q2M2I8 961 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 ADCK5Q3MIX3 580 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 ZNF618Q5T7W0 954 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 RNF20Q5VTR2 975 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 FAM117BQ6P1L5 589 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 CYFIP1Q7L576 1253 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 FANCBQ8NB91 859 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 ADAMTS19Q8TE59 1207 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 KCNB2Q92953 911 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 ATP6V0A1Q93050 837 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 LZTS2Q9BRK4 669 aa9.71□□□□□ -0.86
SATB1-213ENST00000476178 TUT1Q9H6E5 874 aaKnown RBP9.71□□□□□ -0.86
SATB1-213ENST00000476178 TRIP12Q14669 1992 aaPredicted RBP9.71□□□□□ -0.86
SATB1-213ENST00000476178 LAMA2P24043 3122 aaKnown RBP9.7□□□□□ -0.86
SATB1-213ENST00000476178 RSPH10B2B2RC85 870 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 SPATA31C2B4DYI2 1134 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 MEIS2O14770 477 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms