RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 RPL11P62913 178 aaKnown RBP5.33□□□□□ -1.56
VPS13D-207ENST00000476169 ST5P78524 1137 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 TEKQ02763 1124 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 LSAMPQ13449 338 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 TCEAL8Q8IYN2 117 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 CNTD1Q8N815 330 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 CHST14Q8NCH0 376 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 PANK1Q8TE04 598 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 JPH3Q8WXH2 748 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-207ENST00000476169 CELF4Q9BZC1 486 aaKnown RBP5.33□□□□□ -1.56
VPS13D-207ENST00000476169 PUS7LQ9H0K6 701 aaKnown RBP5.33□□□□□ -1.56
VPS13D-207ENST00000476169 LUC7LQ9NQ29 371 aaKnown RBP5.33□□□□□ -1.56
VPS13D-207ENST00000476169 GNL3LQ9NVN8 582 aaKnown RBP5.33□□□□□ -1.56
VPS13D-207ENST00000476169 PPARGC1AQ9UBK2 798 aaKnown RBP5.33□□□□□ -1.56
VPS13D-207ENST00000476169 IP6K2Q9UHH9 426 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 TIMM13Q9Y5L4 95 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-207ENST00000476169 NISCHQ9Y2I1 1504 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 VSTM5A8MXK1 200 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 TRAF5O00463 557 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 WNT9AO14904 365 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 PRPF3O43395 683 aaKnown RBP5.32□□□□□ -1.56
VPS13D-207ENST00000476169 NPHS1O60500 1241 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 FKBP9O95302 570 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 ESR1P03372 595 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 ZSCAN20P17040 1043 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-207ENST00000476169 CCND1P24385 295 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 BCL6P41182 706 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 ADCYAP1R1P41586 468 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 GTF2A2P52657 109 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 DSG1Q02413 1049 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 TCIRG1Q13488 830 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 NXNQ6DKJ4 435 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 FKBP9P1Q75LS8 142 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 CISD2Q8N5K1 135 aaKnown RBP5.32□□□□□ -1.56
VPS13D-207ENST00000476169 PAF1Q8N7H5 531 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 MAGEB6Q8N7X4 407 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 SMC1BQ8NDV3 1235 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 FCRL2Q96LA5 508 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-207ENST00000476169 GPR101Q96P66 508 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-207ENST00000476169 KCNJ15Q99712 375 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 CATSPERZQ9NTU4 200 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 THG1LQ9NWX6 298 aaKnown RBP5.32□□□□□ -1.56
VPS13D-207ENST00000476169 ERVK13-1Q9NX77 482 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 BTG4Q9NY30 223 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 CLDND1Q9NY35 253 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 PIM2Q9P1W9 311 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 B4GALT6Q9UBX8 382 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 FBXL7Q9UJT9 491 aa5.32□□□□□ -1.56
VPS13D-207ENST00000476169 C7orf72A4D263 438 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 NRDCO43847 1150 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 H2AFB1P0C5Y9 115 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 H2AFB2P0C5Z0 115 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 LSSP48449 732 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 OCRLQ01968 901 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 PTPN21Q16825 1174 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 ATP13A4Q4VNC1 1196 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 SYDE2Q5VT97 1194 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 HLA-DQA1Q5Y7H0 255 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 C16orf59Q7L2K0 433 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 OVCH1Q7RTY7 1134 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 C11orf74Q86VG3 221 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 DGKHQ86XP1 1220 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 C2orf69Q8N8R5 385 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 SVIPQ8NHG7 77 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 PPM1EQ8WY54 764 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 SYTL4Q96C24 671 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-207ENST00000476169 HRASLS5Q96KN8 279 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 ZNF700Q9H0M5 742 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 PPCSQ9HAB8 311 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 CRTAC1Q9NQ79 661 aa5.31□□□□□ -1.56
VPS13D-207ENST00000476169 ZC3H7BQ9UGR2 993 aaKnown RBP5.31□□□□□ -1.56
VPS13D-207ENST00000476169 LUC7L2Q9Y383 392 aaKnown RBP5.31□□□□□ -1.56
VPS13D-207ENST00000476169 PTPDC1A2A3K4 754 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 GABRDO14764 452 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 FOSL1P15407 271 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 ATP2A2P16615 1042 aaKnown RBP5.3□□□□□ -1.56
VPS13D-207ENST00000476169 MECP2P51608 486 aaKnown RBP5.3□□□□□ -1.56
VPS13D-207ENST00000476169 RBM10P98175 930 aaKnown RBP5.3□□□□□ -1.56
VPS13D-207ENST00000476169 PICALMQ13492 652 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 DOC2BQ14184 412 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 CRY1Q16526 586 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 ARHGAP44Q17R89 818 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 ABCB5Q2M3G0 1257 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 GRAMD1BQ3KR37 738 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 WDR78Q5VTH9 848 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 IQSEC1Q6DN90 963 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 ZDHHC13Q8IUH4 622 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 TMEM52Q8NDY8 209 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 CHTF18Q8WVB6 975 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 ASB11Q8WXH4 323 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 SLC39A13Q96H72 371 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 TMEM169Q96HH4 297 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 TRIM8Q9BZR9 551 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 MAF1Q9H063 256 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 USP25Q9UHP3 1055 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 CBLCQ9ULV8 474 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 SPEF1Q9Y4P9 236 aa5.3□□□□□ -1.56
VPS13D-207ENST00000476169 H7BY64 318 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 PRKD3O94806 890 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 FBXO21O94952 628 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms