RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 NDUFA10O95299 355 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 BMP3P12645 472 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 TAL1P17542 331 aaPredicted RBP17.76■□□□□ 0.43
VARS2-207ENST00000476162 ARHGAP25P42331 645 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 ARHGAP4P98171 946 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 EN1Q05925 392 aaPredicted RBP17.76■□□□□ 0.43
VARS2-207ENST00000476162 TSR1Q2NL82 804 aaKnown RBP17.76■□□□□ 0.43
VARS2-207ENST00000476162 SPICE1Q8N0Z3 855 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 TXLNBQ8N3L3 684 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 CRYGNQ8WXF5 182 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 MBOAT7Q96N66 472 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 NT5C3AQ9H0P0 336 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 KDM3AQ9Y4C1 1321 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 STAT3P40763 770 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 PSMD2Q13200 908 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 PCMTD1Q96MG8 357 aaPredicted RBP17.76■□□□□ 0.43
VARS2-207ENST00000476162 NUP58Q9BVL2 599 aa17.76■□□□□ 0.43
VARS2-207ENST00000476162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.76■□□□□ 0.43
VARS2-207ENST00000476162 REXO2Q9Y3B8 237 aaKnown RBP17.76■□□□□ 0.43
VARS2-207ENST00000476162 POTEB3A0JP26 581 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 CLRN2A0PK11 232 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 POTECB2RU33 542 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 COASYQ13057 564 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 PRR16Q569H4 304 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 POTEBQ6S5H4 581 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 RETREG2Q8NC44 543 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 STK32BQ9NY57 414 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 TNS1Q9HBL0 1735 aaKnown RBP17.75■□□□□ 0.43
VARS2-207ENST00000476162 ARFGEF1Q9Y6D6 1849 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 LRRC63Q05C16 580 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 FKBP15Q5T1M5 1219 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 MOXD1Q6UVY6 613 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 SLC35F6Q8N357 371 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 ERGIC2Q96RQ1 377 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 PANK4Q9NVE7 773 aa17.75■□□□□ 0.43
VARS2-207ENST00000476162 SPDYE2BA6NHP3 402 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 RAD17O75943 681 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 PLA2G4BP0C869 781 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 SPDYE6P0CI01 402 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 PNMA6AP0CW24 399 aaPredicted RBP17.74■□□□□ 0.43
VARS2-207ENST00000476162 ECE1P42892 770 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 PSEN1P49768 467 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 MEA1Q16626 185 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 VWA3BQ502W6 1294 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 TEX35Q5T0J7 233 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 RSBN1LQ6PCB5 846 aaPredicted RBP17.74■□□□□ 0.43
VARS2-207ENST00000476162 SLFN12Q8IYM2 578 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 NEK11Q8NG66 645 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 PDGFDQ9GZP0 370 aaPredicted RBP17.74■□□□□ 0.43
VARS2-207ENST00000476162 BMP2KQ9NSY1 1161 aaPredicted RBP17.74■□□□□ 0.43
VARS2-207ENST00000476162 SPDYE3A6NKU9 549 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 MED24O75448 989 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 ZBED6P86452 979 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 BTNL9Q6UXG8 535 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 MYOCDQ8IZQ8 938 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 ETNPPLQ8TBG4 499 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 CAMKK2Q96RR4 588 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 EPC1Q9H2F5 836 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 NDST4Q9H3R1 872 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 TMOD2Q9NZR1 351 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 HERC5Q9UII4 1024 aaKnown RBP17.74■□□□□ 0.43
VARS2-207ENST00000476162 PRR12Q9ULL5 1215 aa17.74■□□□□ 0.43
VARS2-207ENST00000476162 OPLAHO14841 1288 aa17.73■□□□□ 0.43
VARS2-207ENST00000476162 FGFR1OPO95684 399 aaKnown RBP17.73■□□□□ 0.43
VARS2-207ENST00000476162 HOXA13P31271 388 aaPredicted RBP17.73■□□□□ 0.43
VARS2-207ENST00000476162 FAM26FQ5R3K3 315 aa17.73■□□□□ 0.43
VARS2-207ENST00000476162 LRRC55Q6ZSA7 311 aa17.73■□□□□ 0.43
VARS2-207ENST00000476162 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
VARS2-207ENST00000476162 TBC1D7Q9P0N9 293 aa17.73■□□□□ 0.43
VARS2-207ENST00000476162 TRIM10Q9UDY6 481 aa17.73■□□□□ 0.43
VARS2-207ENST00000476162 NPHP3-ACAD11A0A0J9YXS1 232 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 CTAGE9A4FU28 777 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 FAM86B1E9PN63 330 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 MYO1CO00159 1063 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 PSMD14O00487 310 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 FAM86B2P0C5J1 330 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 ERCC3P19447 782 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 HOXA7P31268 230 aaPredicted RBP17.72■□□□□ 0.43
VARS2-207ENST00000476162 CLCN6P51797 869 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 GTF2A1P52655 376 aaPredicted RBP17.72■□□□□ 0.43
VARS2-207ENST00000476162 CACNB1Q02641 598 aaPredicted RBP17.72■□□□□ 0.43
VARS2-207ENST00000476162 SPIRE1Q08AE8 756 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 KIF4BQ2VIQ3 1234 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 MCTP2Q6DN12 878 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 GPBP1Q86WP2 473 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 ACER1Q8TDN7 264 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 LENG9Q96B70 501 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 FGFBP2Q9BYJ0 223 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 COL2A1P02458 1487 aaPredicted RBP17.72■□□□□ 0.43
VARS2-207ENST00000476162 POTEFA5A3E0 1075 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 FOSP01100 380 aaPredicted RBP17.72■□□□□ 0.43
VARS2-207ENST00000476162 POTEIP0CG38 1075 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 SREBF1P36956 1147 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 MAN2A1Q16706 1144 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 Q4G0T1 1027 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 FIGNQ5HY92 759 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 KIAA1755Q5JYT7 1200 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 POTEGQ6S5H5 508 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 POTEEQ6S8J3 1075 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 RSRC2Q7L4I2 434 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms