RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 GPNMBQ14956 572 aa11.46□□□□□ -0.57
PTPN7-208ENST00000476061 KIAA0753Q2KHM9 967 aa11.46□□□□□ -0.57
PTPN7-208ENST00000476061 HSDL1Q3SXM5 330 aa11.46□□□□□ -0.57
PTPN7-208ENST00000476061 GNPTABQ3T906 1256 aa11.46□□□□□ -0.57
PTPN7-208ENST00000476061 TJAP1Q5JTD0 557 aa11.46□□□□□ -0.57
PTPN7-208ENST00000476061 LRRC8DQ7L1W4 858 aa11.46□□□□□ -0.57
PTPN7-208ENST00000476061 ZNF654Q8IZM8 581 aa11.46□□□□□ -0.57
PTPN7-208ENST00000476061 USP38Q8NB14 1042 aa11.46□□□□□ -0.57
PTPN7-208ENST00000476061 CTCFLQ8NI51 663 aaPredicted RBP11.46□□□□□ -0.57
PTPN7-208ENST00000476061 PPP1R13LQ8WUF5 828 aa11.46□□□□□ -0.57
PTPN7-208ENST00000476061 SPATA33Q96N06 139 aa11.46□□□□□ -0.57
PTPN7-208ENST00000476061 INPP4AQ96PE3 977 aaPredicted RBP11.46□□□□□ -0.57
PTPN7-208ENST00000476061 FTOQ9C0B1 505 aaKnown RBP eCLIP11.46□□□□□ -0.57
PTPN7-208ENST00000476061 LY9Q9HBG7 655 aa11.46□□□□□ -0.57
PTPN7-208ENST00000476061 CDH23Q9H251 3354 aa11.46□□□□□ -0.58
PTPN7-208ENST00000476061 LAMA2P24043 3122 aaKnown RBP11.46□□□□□ -0.58
PTPN7-208ENST00000476061 EFCAB14O75071 495 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 CALM1P0DP23 149 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 CALM2P0DP24 149 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 CALM3P0DP25 149 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 CKBP12277 381 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 UBA1P22314 1058 aaKnown RBP11.45□□□□□ -0.58
PTPN7-208ENST00000476061 MCM5P33992 734 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 LIFRP42702 1097 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 CHMP4BP1P59074 171 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 SP2Q02086 613 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 NEDD9Q14511 834 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 XRRA1Q6P2D8 792 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 CNKSR3Q6P9H4 555 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 CASC1Q6TDU7 716 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 FCHSD1Q86WN1 690 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 HERC6Q8IVU3 1022 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 IL31RAQ8NI17 732 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 DHX38Q92620 1227 aaKnown RBP11.45□□□□□ -0.58
PTPN7-208ENST00000476061 RRP36Q96EU6 259 aaKnown RBP11.45□□□□□ -0.58
PTPN7-208ENST00000476061 C16orf70Q9BSU1 422 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 ALG1Q9BT22 464 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 LSG1Q9H089 658 aaKnown RBP11.45□□□□□ -0.58
PTPN7-208ENST00000476061 MLXIPQ9HAP2 919 aa11.45□□□□□ -0.58
PTPN7-208ENST00000476061 MICAL3Q7RTP6 2002 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 KAT6AQ92794 2004 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 ABHD14A-ACY1A0A1B0GW23 586 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 SPATA31C2B4DYI2 1134 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 FIBPO43427 364 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 PRC1O43663 620 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 CA3P07451 260 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 ZNF286BP0CG31 522 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 MYOGP15173 224 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 IGFBP4P22692 258 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 HOXC8P31273 242 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 MRPS9P82933 396 aaKnown RBP11.44□□□□□ -0.58
PTPN7-208ENST00000476061 NECTIN1Q15223 517 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 TRIM71Q2Q1W2 868 aaKnown RBP11.44□□□□□ -0.58
PTPN7-208ENST00000476061 PCNX4Q63HM2 1172 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 SMARCC2Q8TAQ2 1214 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 CUL5Q93034 780 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 SENP7Q9BQF6 1050 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 USP26Q9BXU7 913 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 THEGQ9P2T0 379 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 SEC63Q9UGP8 760 aaKnown RBP11.44□□□□□ -0.58
PTPN7-208ENST00000476061 SIP14410 1827 aa11.44□□□□□ -0.58
PTPN7-208ENST00000476061 EMSYQ7Z589 1322 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 MYO9BQ13459 2157 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 CCDC69A6NI79 296 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 H3BRB1 525 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 SH2B2O14492 632 aaPredicted RBP11.43□□□□□ -0.58
PTPN7-208ENST00000476061 MEIS2O14770 477 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 NBNO60934 754 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 CAND2O75155 1236 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 KCNJ6P48051 423 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 WDR5P61964 334 aaKnown RBP11.43□□□□□ -0.58
PTPN7-208ENST00000476061 TRAF7Q6Q0C0 670 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 METTL7BQ6UX53 244 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 SERINC5Q86VE9 423 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 TEX2Q8IWB9 1127 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 GIMAP8Q8ND71 665 aaPredicted RBP11.43□□□□□ -0.58
PTPN7-208ENST00000476061 ESYT1Q9BSJ8 1104 aa11.43□□□□□ -0.58
PTPN7-208ENST00000476061 TSPYL2Q9H2G4 693 aaPredicted RBP11.43□□□□□ -0.58
PTPN7-208ENST00000476061 TUT1Q9H6E5 874 aaKnown RBP11.43□□□□□ -0.58
PTPN7-208ENST00000476061 COL4A4P53420 1690 aaPredicted RBP11.43□□□□□ -0.58
PTPN7-208ENST00000476061 C17orf102A2RUQ5 167 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 NOP56O00567 594 aaKnown RBP11.42□□□□□ -0.58
PTPN7-208ENST00000476061 SLC27A2O14975 620 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 TLL1O43897 1013 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 LGALS2P05162 132 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 TAP1Q03518 808 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 IKBKEQ14164 716 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 HIC1Q14526 733 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 BMP2KLQ5H9B9 411 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 ZNF618Q5T7W0 954 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 CREB3L3Q68CJ9 461 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 NLRX1Q86UT6 975 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 SGMS1Q86VZ5 419 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 PPM1EQ8WY54 764 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 GPKOWQ92917 476 aaPredicted RBP eCLIP11.42□□□□□ -0.58
PTPN7-208ENST00000476061 ASB2Q96Q27 587 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 GPR20Q99678 358 aa11.42□□□□□ -0.58
PTPN7-208ENST00000476061 UNC80Q8N2C7 3258 aa11.41□□□□□ -0.58
PTPN7-208ENST00000476061 MAFGO15525 162 aa11.41□□□□□ -0.58
PTPN7-208ENST00000476061 GTPBP6O43824 516 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms