RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 PPTC7Q8NI37 304 aa21.04■□□□□ 0.96
RNF220-212ENST00000475378 NSUN6Q8TEA1 469 aaKnown RBP21.04■□□□□ 0.96
RNF220-212ENST00000475378 SNX27Q96L92 541 aa21.04■□□□□ 0.96
RNF220-212ENST00000475378 IWS1Q96ST2 819 aa21.04■□□□□ 0.96
RNF220-212ENST00000475378 FAM50BQ9Y247 325 aa21.04■□□□□ 0.96
RNF220-212ENST00000475378 GPM6BQ13491 265 aa21.03■□□□□ 0.96
RNF220-212ENST00000475378 RRP12Q5JTH9 1297 aaKnown RBP21.03■□□□□ 0.96
RNF220-212ENST00000475378 OTUD7AQ8TE49 926 aaPredicted RBP21.03■□□□□ 0.96
RNF220-212ENST00000475378 TTC14Q96N46 770 aa21.03■□□□□ 0.96
RNF220-212ENST00000475378 NSUN3Q9H649 340 aaKnown RBP21.03■□□□□ 0.96
RNF220-212ENST00000475378 TOMM22Q9NS69 142 aa21.03■□□□□ 0.96
RNF220-212ENST00000475378 IRS1P35568 1242 aa21.02■□□□□ 0.96
RNF220-212ENST00000475378 LTBRP36941 435 aa21.02■□□□□ 0.96
RNF220-212ENST00000475378 SERINC5Q86VE9 423 aa21.02■□□□□ 0.96
RNF220-212ENST00000475378 TOP1MTQ969P6 601 aa21.02■□□□□ 0.96
RNF220-212ENST00000475378 RMDN3Q96TC7 470 aa21.02■□□□□ 0.96
RNF220-212ENST00000475378 CPVLQ9H3G5 476 aa21.02■□□□□ 0.96
RNF220-212ENST00000475378 ABCB11O95342 1321 aa21.02■□□□□ 0.95
RNF220-212ENST00000475378 RSPH10B2B2RC85 870 aa21.01■□□□□ 0.95
RNF220-212ENST00000475378 FGAP02671 866 aa21.01■□□□□ 0.95
RNF220-212ENST00000475378 RSPH10BP0C881 870 aa21.01■□□□□ 0.95
RNF220-212ENST00000475378 GOLGA8HP0CJ92 632 aa21.01■□□□□ 0.95
RNF220-212ENST00000475378 LAMC2Q13753 1193 aa21.01■□□□□ 0.95
RNF220-212ENST00000475378 GPATCH4Q5T3I0 446 aaKnown RBP21.01■□□□□ 0.95
RNF220-212ENST00000475378 FBXO11Q86XK2 927 aa21.01■□□□□ 0.95
RNF220-212ENST00000475378 TMEM192Q8IY95 271 aa21.01■□□□□ 0.95
RNF220-212ENST00000475378 CDC37Q16543 378 aaPredicted RBP21■□□□□ 0.95
RNF220-212ENST00000475378 CTC1Q2NKJ3 1217 aa21■□□□□ 0.95
RNF220-212ENST00000475378 RPAINQ86UA6 219 aa21■□□□□ 0.95
RNF220-212ENST00000475378 YME1L1Q96TA2 773 aa21■□□□□ 0.95
RNF220-212ENST00000475378 OSBPL7Q9BZF2 842 aa21■□□□□ 0.95
RNF220-212ENST00000475378 UPF3BQ9BZI7 483 aaKnown RBP21■□□□□ 0.95
RNF220-212ENST00000475378 UBA5Q9GZZ9 404 aa21■□□□□ 0.95
RNF220-212ENST00000475378 CLDND1Q9NY35 253 aa21■□□□□ 0.95
RNF220-212ENST00000475378 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.99■□□□□ 0.95
RNF220-212ENST00000475378 EIF3JO75822 258 aaKnown RBP20.99■□□□□ 0.95
RNF220-212ENST00000475378 HOXC8P31273 242 aa20.99■□□□□ 0.95
RNF220-212ENST00000475378 THPOP40225 353 aa20.99■□□□□ 0.95
RNF220-212ENST00000475378 SMAD2Q15796 467 aaKnown RBP20.99■□□□□ 0.95
RNF220-212ENST00000475378 HERC4Q5GLZ8 1057 aaPredicted RBP20.99■□□□□ 0.95
RNF220-212ENST00000475378 EP400NLQ6ZTU2 488 aa20.99■□□□□ 0.95
RNF220-212ENST00000475378 DHX37Q8IY37 1157 aaKnown RBP20.99■□□□□ 0.95
RNF220-212ENST00000475378 MFSD14AQ96MC6 490 aa20.99■□□□□ 0.95
RNF220-212ENST00000475378 PHOX2BQ99453 314 aa20.99■□□□□ 0.95
RNF220-212ENST00000475378 MRVI1Q9Y6F6 885 aa20.99■□□□□ 0.95
RNF220-212ENST00000475378 CFAP54Q96N23 3096 aa20.98■□□□□ 0.95
RNF220-212ENST00000475378 PPFIA4O75335 1185 aa20.98■□□□□ 0.95
RNF220-212ENST00000475378 NR3C2P08235 984 aa20.98■□□□□ 0.95
RNF220-212ENST00000475378 EIF2AK2P19525 551 aaKnown RBP20.98■□□□□ 0.95
RNF220-212ENST00000475378 ARHGEF16Q5VV41 709 aa20.98■□□□□ 0.95
RNF220-212ENST00000475378 MYSM1Q5VVJ2 828 aa20.98■□□□□ 0.95
RNF220-212ENST00000475378 MCF2L2Q86YR7 1114 aa20.98■□□□□ 0.95
RNF220-212ENST00000475378 C16orf70Q9BSU1 422 aa20.98■□□□□ 0.95
RNF220-212ENST00000475378 PXMP2Q9NR77 195 aa20.98■□□□□ 0.95
RNF220-212ENST00000475378 MUTYHQ9UIF7 546 aa20.98■□□□□ 0.95
RNF220-212ENST00000475378 KMT2EQ8IZD2 1858 aa20.98■□□□□ 0.95
RNF220-212ENST00000475378 ZMYM6O95789 1325 aa20.98■□□□□ 0.95
RNF220-212ENST00000475378 SALL3Q9BXA9 1300 aa20.98■□□□□ 0.95
RNF220-212ENST00000475378 KAT6AQ92794 2004 aa20.97■□□□□ 0.95
RNF220-212ENST00000475378 DOCK5Q9H7D0 1870 aa20.97■□□□□ 0.95
RNF220-212ENST00000475378 MBTPS2O43462 519 aa20.97■□□□□ 0.95
RNF220-212ENST00000475378 NCK2O43639 380 aa20.97■□□□□ 0.95
RNF220-212ENST00000475378 RGS20O76081 388 aa20.97■□□□□ 0.95
RNF220-212ENST00000475378 LINC00271P0C7V0 271 aa20.97■□□□□ 0.95
RNF220-212ENST00000475378 DLX2Q07687 328 aaPredicted RBP20.97■□□□□ 0.95
RNF220-212ENST00000475378 HSDL1Q3SXM5 330 aa20.97■□□□□ 0.95
RNF220-212ENST00000475378 ADGRF4Q8IZF3 695 aa20.97■□□□□ 0.95
RNF220-212ENST00000475378 SEPT8Q92599 483 aa20.97■□□□□ 0.95
RNF220-212ENST00000475378 HELLSQ9NRZ9 838 aa20.97■□□□□ 0.95
RNF220-212ENST00000475378 C5orf67F2Z3F1 127 aa20.96■□□□□ 0.95
RNF220-212ENST00000475378 UPP2O95045 317 aa20.96■□□□□ 0.95
RNF220-212ENST00000475378 MX1P20591 662 aa20.96■□□□□ 0.95
RNF220-212ENST00000475378 CELF3Q5SZQ8 465 aaKnown RBP20.96■□□□□ 0.95
RNF220-212ENST00000475378 MIER1Q8N108 512 aa20.96■□□□□ 0.95
RNF220-212ENST00000475378 PRSS33Q8NF86 280 aa20.96■□□□□ 0.95
RNF220-212ENST00000475378 LAMA4Q16363 1823 aa20.96■□□□□ 0.95
RNF220-212ENST00000475378 ZDBF2Q9HCK1 2354 aa20.96■□□□□ 0.95
RNF220-212ENST00000475378 HAND2P61296 217 aa20.95■□□□□ 0.94
RNF220-212ENST00000475378 HYAL1Q12794 435 aa20.95■□□□□ 0.94
RNF220-212ENST00000475378 QRICH1Q2TAL8 776 aa20.95■□□□□ 0.94
RNF220-212ENST00000475378 RNF135Q8IUD6 432 aa20.95■□□□□ 0.94
RNF220-212ENST00000475378 TBC1D10CQ8IV04 446 aa20.95■□□□□ 0.94
RNF220-212ENST00000475378 ATP6V0A1Q93050 837 aa20.95■□□□□ 0.94
RNF220-212ENST00000475378 POP1Q99575 1024 aaKnown RBP20.95■□□□□ 0.94
RNF220-212ENST00000475378 RCAN3Q9UKA8 241 aa20.95■□□□□ 0.94
RNF220-212ENST00000475378 MRPL11Q9Y3B7 192 aaKnown RBP20.95■□□□□ 0.94
RNF220-212ENST00000475378 TTC3P53804 2025 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 C17orf102A2RUQ5 167 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 OPLAHO14841 1288 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 TREHO43280 583 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 HSPD1P10809 573 aaKnown RBP20.94■□□□□ 0.94
RNF220-212ENST00000475378 PCP11498 1178 aaKnown RBP20.94■□□□□ 0.94
RNF220-212ENST00000475378 HSD17B4P51659 736 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 SP2Q02086 613 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 GHRHRQ02643 423 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 BMP8AQ7Z5Y6 402 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 DGKHQ86XP1 1220 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 FAM227BQ96M60 508 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 SPATA33Q96N06 139 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 IFIH1Q9BYX4 1025 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms