RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 HSPA6P17066 643 aa23.53■■□□□ 1.36
SH3D21-202ENST00000474766 PAK1Q13153 545 aa23.53■■□□□ 1.36
SH3D21-202ENST00000474766 CCSER1Q9C0I3 900 aa23.53■■□□□ 1.36
SH3D21-202ENST00000474766 GOLGA8HP0CJ92 632 aa23.52■■□□□ 1.36
SH3D21-202ENST00000474766 PAPD7Q5XG87 772 aaKnown RBP23.52■■□□□ 1.36
SH3D21-202ENST00000474766 CDC42EP5Q6NZY7 148 aa23.52■■□□□ 1.36
SH3D21-202ENST00000474766 VEZTQ9HBM0 779 aa23.52■■□□□ 1.36
SH3D21-202ENST00000474766 MYL1P05976 194 aa23.52■■□□□ 1.36
SH3D21-202ENST00000474766 CACNB3P54284 484 aa23.52■■□□□ 1.36
SH3D21-202ENST00000474766 SEMA3FQ13275 785 aa23.52■■□□□ 1.36
SH3D21-202ENST00000474766 NCAPH2Q6IBW4 605 aa23.52■■□□□ 1.36
SH3D21-202ENST00000474766 APOBEC3FQ8IUX4 373 aaKnown RBP23.52■■□□□ 1.36
SH3D21-202ENST00000474766 EHBP1Q8NDI1 1231 aa23.52■■□□□ 1.36
SH3D21-202ENST00000474766 RNF216Q9NWF9 866 aaPredicted RBP23.52■■□□□ 1.36
SH3D21-202ENST00000474766 CEP350Q5VT06 3117 aa23.51■■□□□ 1.35
SH3D21-202ENST00000474766 TFRCP02786 760 aaKnown RBP23.51■■□□□ 1.35
SH3D21-202ENST00000474766 PARP1P09874 1014 aaKnown RBP23.51■■□□□ 1.35
SH3D21-202ENST00000474766 APLP1P51693 650 aa23.51■■□□□ 1.35
SH3D21-202ENST00000474766 KRT31Q15323 416 aa23.51■■□□□ 1.35
SH3D21-202ENST00000474766 PRAMEF18Q5VWM3 479 aa23.51■■□□□ 1.35
SH3D21-202ENST00000474766 GBP6Q6ZN66 633 aa23.51■■□□□ 1.35
SH3D21-202ENST00000474766 ANKRD20A12PQ8NF67 263 aa23.51■■□□□ 1.35
SH3D21-202ENST00000474766 FAM76AQ8TAV0 307 aa23.51■■□□□ 1.35
SH3D21-202ENST00000474766 RUBCNQ92622 972 aa23.51■■□□□ 1.35
SH3D21-202ENST00000474766 CST9Q5W186 159 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 NELFBQ8WX92 580 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 CRACR2AQ9BSW2 395 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 MYH1P12882 1939 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 A6NNZ2 444 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 HTRA3P83110 453 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 KCNB1Q14721 858 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 TUBB8Q3ZCM7 444 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 KRT25Q7Z3Z0 450 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 CCDC91Q7Z6B0 441 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 CDCA5Q96FF9 252 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 USP40Q9NVE5 1235 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 KBTBD4Q9NVX7 518 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 MTMR7Q9Y216 660 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 SAR1BQ9Y6B6 198 aa23.5■■□□□ 1.35
SH3D21-202ENST00000474766 EPN1Q9Y6I3 576 aaPredicted RBP23.5■■□□□ 1.35
SH3D21-202ENST00000474766 N4BP3O15049 544 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 ABL1P00519 1130 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 PRCPP42785 496 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 CEP95Q96GE4 821 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 DRC1Q96MC2 740 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 PP2D1A8MPX8 630 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 NDUFA10O95299 355 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 USP8P40818 1118 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 UBA7P41226 1012 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 NAPAP54920 295 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 PPFIA1Q13136 1202 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 TCP11X2Q5H9J9 407 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 ADSSL1Q8N142 457 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 NUP88Q99567 741 aaPredicted RBP23.49■■□□□ 1.35
SH3D21-202ENST00000474766 SLF1Q9BQI6 1058 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 DEFB129Q9H1M3 183 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 CPVLQ9H3G5 476 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 ZNF408Q9H9D4 720 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 GDAQ9Y2T3 454 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 FOCADQ5VW36 1801 aa23.49■■□□□ 1.35
SH3D21-202ENST00000474766 TCP10L2B9ZVM9 353 aa23.48■■□□□ 1.35
SH3D21-202ENST00000474766 EBAG9O00559 213 aa23.48■■□□□ 1.35
SH3D21-202ENST00000474766 ERLIN2O94905 339 aa23.48■■□□□ 1.35
SH3D21-202ENST00000474766 COPB1P53618 953 aaKnown RBP23.48■■□□□ 1.35
SH3D21-202ENST00000474766 USP17L2Q6R6M4 530 aa23.48■■□□□ 1.35
SH3D21-202ENST00000474766 POTEDQ86YR6 584 aa23.48■■□□□ 1.35
SH3D21-202ENST00000474766 RRP36Q96EU6 259 aaKnown RBP23.48■■□□□ 1.35
SH3D21-202ENST00000474766 AK8Q96MA6 479 aa23.48■■□□□ 1.35
SH3D21-202ENST00000474766 C6orf50Q9HD87 102 aa23.48■■□□□ 1.35
SH3D21-202ENST00000474766 ATXN2Q99700 1313 aaKnown RBP23.48■■□□□ 1.35
SH3D21-202ENST00000474766 PLIN4Q96Q06 1357 aa23.48■■□□□ 1.35
SH3D21-202ENST00000474766 KLRC4O43908 158 aa23.47■■□□□ 1.35
SH3D21-202ENST00000474766 COBLO75128 1261 aa23.47■■□□□ 1.35
SH3D21-202ENST00000474766 CELF2O95319 508 aaKnown RBP23.47■■□□□ 1.35
SH3D21-202ENST00000474766 GNA11P29992 359 aa23.47■■□□□ 1.35
SH3D21-202ENST00000474766 NFIAQ12857 509 aa23.47■■□□□ 1.35
SH3D21-202ENST00000474766 IQCEQ6IPM2 695 aa23.47■■□□□ 1.35
SH3D21-202ENST00000474766 CUEDC2Q9H467 287 aa23.47■■□□□ 1.35
SH3D21-202ENST00000474766 CNTNAP1P78357 1384 aa23.47■■□□□ 1.35
SH3D21-202ENST00000474766 SMCO2A6NFE2 343 aa23.47■■□□□ 1.35
SH3D21-202ENST00000474766 KRT9P35527 623 aa23.47■■□□□ 1.35
SH3D21-202ENST00000474766 GGCXP38435 758 aa23.47■■□□□ 1.35
SH3D21-202ENST00000474766 NONOQ15233 471 aaKnown RBP eCLIP23.47■■□□□ 1.355e-7■■■■□ 21.6
SH3D21-202ENST00000474766 CCNI2Q6ZMN8 369 aaPredicted RBP23.47■■□□□ 1.35
SH3D21-202ENST00000474766 MICALL1Q8N3F8 863 aa23.47■■□□□ 1.35
SH3D21-202ENST00000474766 MAGEF1Q9HAY2 307 aa23.47■■□□□ 1.35
SH3D21-202ENST00000474766 REXO2Q9Y3B8 237 aaKnown RBP23.47■■□□□ 1.35
SH3D21-202ENST00000474766 ESYT2A0FGR8 921 aa23.46■■□□□ 1.35
SH3D21-202ENST00000474766 KCNJ18B7U540 433 aa23.46■■□□□ 1.35
SH3D21-202ENST00000474766 RHOBTB3O94955 611 aa23.46■■□□□ 1.35
SH3D21-202ENST00000474766 IRAK1P51617 712 aa23.46■■□□□ 1.35
SH3D21-202ENST00000474766 KCNJ12Q14500 433 aa23.46■■□□□ 1.35
SH3D21-202ENST00000474766 RASA3Q14644 834 aa23.46■■□□□ 1.35
SH3D21-202ENST00000474766 RIOX1Q9H6W3 641 aa23.46■■□□□ 1.35
SH3D21-202ENST00000474766 ANO9A1A5B4 782 aa23.45■■□□□ 1.35
SH3D21-202ENST00000474766 GOLGA6CA6NDK9 693 aa23.45■■□□□ 1.35
SH3D21-202ENST00000474766 TMEM88BA6NKF7 163 aa23.45■■□□□ 1.35
SH3D21-202ENST00000474766 AGPSO00116 658 aa23.45■■□□□ 1.35
SH3D21-202ENST00000474766 OR52Z1P0C646 297 aa23.45■■□□□ 1.35
SH3D21-202ENST00000474766 GOLGA6DP0CG33 693 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms