RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SLC12A3P55017 1021 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 TNFAIP1Q13829 316 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 KIF4BQ2VIQ3 1234 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 MIIPQ5JXC2 388 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 POTEBQ6S5H4 581 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 TOGARAM2Q6ZUX3 1019 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 MTERF4Q7Z6M4 381 aaKnown RBP10.94□□□□□ -0.66
USP39-214ENST00000474572 TMTC1Q8IUR5 882 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 ZC3H3Q8IXZ2 948 aaKnown RBP10.94□□□□□ -0.66
USP39-214ENST00000474572 SPICE1Q8N0Z3 855 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 RETREG2Q8NC44 543 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 ERMNQ8TAM6 284 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 GJA10Q969M2 543 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 IQCDQ96DY2 449 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 ERGIC2Q96RQ1 377 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 MAP7D2Q96T17 732 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 TUBGCP2Q9BSJ2 902 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 POLR3CQ9BUI4 534 aaPredicted RBP10.94□□□□□ -0.66
USP39-214ENST00000474572 SLC39A2Q9NP94 309 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 MRPL11Q9Y3B7 192 aaKnown RBP10.94□□□□□ -0.66
USP39-214ENST00000474572 CD2APQ9Y5K6 639 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 ADGRG1Q9Y653 693 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 RLFQ13129 1914 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 ZNF536O15090 1300 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 RPTORQ8N122 1335 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 SOWAHDA6NJG2 315 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 GCOM1H8Y6P7 765 aaPredicted RBP10.93□□□□□ -0.66
USP39-214ENST00000474572 RNF225M0QZC1 329 aaPredicted RBP10.93□□□□□ -0.66
USP39-214ENST00000474572 FZD9O00144 591 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 WDR46O15213 610 aaKnown RBP10.93□□□□□ -0.66
USP39-214ENST00000474572 FANCGO15287 622 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 MARCH6O60337 910 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 ZBTB7AO95365 584 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 FGFR1OPO95684 399 aaKnown RBP10.93□□□□□ -0.66
USP39-214ENST00000474572 CCDC175P0C221 793 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 POLR2MP0CAP2 368 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 SPATA31C1P0DKV0 1188 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 TAL1P17542 331 aaPredicted RBP10.93□□□□□ -0.66
USP39-214ENST00000474572 MUTP22033 750 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 HSD17B4P51659 736 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 ERVK-24P63145 666 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 UBXN1Q04323 297 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 RASA3Q14644 834 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 PRR16Q569H4 304 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 FAM26FQ5R3K3 315 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 SYT10Q6XYQ8 523 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 LRRC55Q6ZSA7 311 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 DYMQ7RTS9 669 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 CATSPER3Q86XQ3 398 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 CCDC65Q8IXS2 484 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 SAMD3Q8N6K7 520 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 SYT2Q8N9I0 419 aaPredicted RBP10.93□□□□□ -0.66
USP39-214ENST00000474572 JDP2Q8WYK2 163 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 LPAR1Q92633 364 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 HPS3Q969F9 1004 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 DNAJC7Q99615 494 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 WDR18Q9BV38 432 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 NUP58Q9BVL2 599 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 GLIS2Q9BZE0 524 aaPredicted RBP10.93□□□□□ -0.66
USP39-214ENST00000474572 KIAA1683Q9H0B3 1180 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 CAPN11Q9UMQ6 739 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 KIAA1024Q9UPX6 916 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 RABGAP1Q9Y3P9 1069 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 PAPPA2Q9BXP8 1791 aa10.93□□□□□ -0.66
USP39-214ENST00000474572 FRMPD4Q14CM0 1322 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 A0A1W2PQJ5 194 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 SHTN1A0MZ66 631 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 RASSF10A6NK89 507 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 RRP9O43818 475 aaKnown RBP10.92□□□□□ -0.66
USP39-214ENST00000474572 PSMD10O75832 226 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 SLU7O95391 586 aaKnown RBP10.92□□□□□ -0.66
USP39-214ENST00000474572 ICAM1P05362 532 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 HOXA13P31271 388 aaPredicted RBP10.92□□□□□ -0.66
USP39-214ENST00000474572 STAT3P40763 770 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 MARSP56192 900 aaKnown RBP10.92□□□□□ -0.66
USP39-214ENST00000474572 NCBP1Q09161 790 aaKnown RBP10.92□□□□□ -0.66
USP39-214ENST00000474572 PPP2R5CQ13362 524 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 MTF1Q14872 753 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 MEA1Q16626 185 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 ARSHQ5FYA8 562 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 B3GNT9Q6UX72 402 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 MIGA2Q7L4E1 593 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 ZNF592Q92610 1267 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 SLC5A5Q92911 643 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 ERO1AQ96HE7 468 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 EHMT1Q9H9B1 1298 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 MRPL44Q9H9J2 332 aaKnown RBP10.92□□□□□ -0.66
USP39-214ENST00000474572 BMP2KQ9NSY1 1161 aaPredicted RBP10.92□□□□□ -0.66
USP39-214ENST00000474572 PANK4Q9NVE7 773 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.92□□□□□ -0.66
USP39-214ENST00000474572 WDR90Q96KV7 1748 aa10.92□□□□□ -0.66
USP39-214ENST00000474572 TTC26A0AVF1 554 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 POTEFA5A3E0 1075 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 B4DLN1 442 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 CTNND1O60716 968 aaKnown RBP10.91□□□□□ -0.66
USP39-214ENST00000474572 EGFRP00533 1210 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 IDEP14735 1019 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 KRT9P35527 623 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 PRELPP51888 382 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms