RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 RIC8AQ9NPQ8 531 aa18.36■□□□□ 0.53
ITGB1-210ENST00000474568 TRMT13Q9NUP7 481 aaKnown RBP18.36■□□□□ 0.53
ITGB1-210ENST00000474568 PKD2L1Q9P0L9 805 aa18.36■□□□□ 0.53
ITGB1-210ENST00000474568 A0A1W2PPC1 479 aa18.35■□□□□ 0.53
ITGB1-210ENST00000474568 SOX1O00570 391 aaPredicted RBP18.35■□□□□ 0.53
ITGB1-210ENST00000474568 PRPF3O43395 683 aaKnown RBP18.35■□□□□ 0.53
ITGB1-210ENST00000474568 KPNA6O60684 536 aa18.35■□□□□ 0.53
ITGB1-210ENST00000474568 CD4P01730 458 aa18.35■□□□□ 0.53
ITGB1-210ENST00000474568 EVCP57679 992 aa18.35■□□□□ 0.53
ITGB1-210ENST00000474568 SP4Q02446 784 aa18.35■□□□□ 0.53
ITGB1-210ENST00000474568 NTRK3Q16288 839 aa18.35■□□□□ 0.53
ITGB1-210ENST00000474568 PKN1Q16512 942 aa18.35■□□□□ 0.53
ITGB1-210ENST00000474568 HSDL1Q3SXM5 330 aa18.35■□□□□ 0.53
ITGB1-210ENST00000474568 MYSM1Q5VVJ2 828 aa18.35■□□□□ 0.53
ITGB1-210ENST00000474568 NLRX1Q86UT6 975 aa18.35■□□□□ 0.53
ITGB1-210ENST00000474568 ALG1Q9BT22 464 aa18.35■□□□□ 0.53
ITGB1-210ENST00000474568 ALDH8A1Q9H2A2 487 aaPredicted RBP18.35■□□□□ 0.53
ITGB1-210ENST00000474568 UMODL1Q5DID0 1318 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 hCG_1984214I3L0E3 225 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 ADAMTS3O15072 1205 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 FIBPO43427 364 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 DTNBO60941 627 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 STAM2O75886 525 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 TIMP1P01033 207 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 CYP2C9P11712 490 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 CYP2C18P33260 490 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 EPHB4P54760 987 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 DGKDQ16760 1214 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 C9orf50Q5SZB4 431 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 JAKMIP3Q5VZ66 844 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 CYFIP1Q7L576 1253 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 ZNF713Q8N859 430 aaPredicted RBP18.34■□□□□ 0.53
ITGB1-210ENST00000474568 PPTC7Q8NI37 304 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 KAT2BQ92831 832 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 EMID1Q96A84 441 aaPredicted RBP18.34■□□□□ 0.53
ITGB1-210ENST00000474568 LRCH3Q96II8 777 aa18.34■□□□□ 0.53
ITGB1-210ENST00000474568 SPATA31C2B4DYI2 1134 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 CPLX1O14810 134 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 TGFB3P10600 412 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 IFNAR1P17181 557 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 ICAM3P32942 547 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 ANAPC15P60006 121 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 FPGSQ05932 587 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 SHHQ15465 462 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 XRRA1Q6P2D8 792 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 PIAS4Q8N2W9 510 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-210ENST00000474568 ZNF274Q96GC6 653 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-210ENST00000474568 ANO3Q9BYT9 981 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 EHMT1Q9H9B1 1298 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 VPS54Q9P1Q0 977 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 TELO2Q9Y4R8 837 aa18.33■□□□□ 0.52
ITGB1-210ENST00000474568 NOP56O00567 594 aaKnown RBP18.32■□□□□ 0.52
ITGB1-210ENST00000474568 ITGB5P18084 799 aa18.32■□□□□ 0.52
ITGB1-210ENST00000474568 PSEN2P49810 448 aa18.32■□□□□ 0.52
ITGB1-210ENST00000474568 AK2P54819 239 aa18.32■□□□□ 0.52
ITGB1-210ENST00000474568 CCL23P55773 120 aa18.32■□□□□ 0.52
ITGB1-210ENST00000474568 RNF26Q9BY78 433 aaPredicted RBP18.32■□□□□ 0.52
ITGB1-210ENST00000474568 HIPK3Q9H422 1215 aa18.32■□□□□ 0.52
ITGB1-210ENST00000474568 LTBP2Q14767 1821 aa18.32■□□□□ 0.52
ITGB1-210ENST00000474568 ATP9AO75110 1047 aa18.31■□□□□ 0.52
ITGB1-210ENST00000474568 SSRP1Q08945 709 aaKnown RBP18.31■□□□□ 0.52
ITGB1-210ENST00000474568 NEDD9Q14511 834 aa18.31■□□□□ 0.52
ITGB1-210ENST00000474568 MFSD10Q14728 455 aa18.31■□□□□ 0.52
ITGB1-210ENST00000474568 MFSD5Q6N075 450 aa18.31■□□□□ 0.52
ITGB1-210ENST00000474568 NFRKBQ6P4R8 1299 aa18.31■□□□□ 0.52
ITGB1-210ENST00000474568 RASGRP4Q8TDF6 673 aa18.31■□□□□ 0.52
ITGB1-210ENST00000474568 SEZ6LQ9BYH1 1024 aa18.31■□□□□ 0.52
ITGB1-210ENST00000474568 C6orf50Q9HD87 102 aa18.31■□□□□ 0.52
ITGB1-210ENST00000474568 TPCN1Q9ULQ1 816 aa18.31■□□□□ 0.52
ITGB1-210ENST00000474568 NOD1Q9Y239 953 aa18.31■□□□□ 0.52
ITGB1-210ENST00000474568 UBIAD1Q9Y5Z9 338 aa18.31■□□□□ 0.52
ITGB1-210ENST00000474568 KIAA1217Q5T5P2 1943 aa18.31■□□□□ 0.52
ITGB1-210ENST00000474568 FOSP01100 380 aaPredicted RBP18.3■□□□□ 0.52
ITGB1-210ENST00000474568 ACRP10323 421 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 CSF2RAP15509 400 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 CLK2P49760 499 aaKnown RBP18.3■□□□□ 0.52
ITGB1-210ENST00000474568 SCRN1Q12765 414 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 MTMR1Q13613 665 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 KIAA0753Q2KHM9 967 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 UTP14CQ5TAP6 766 aaKnown RBP18.3■□□□□ 0.52
ITGB1-210ENST00000474568 METTL7BQ6UX53 244 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 TRIM22Q8IYM9 498 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 CYP2W1Q8TAV3 490 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 CCDC12Q8WUD4 166 aaPredicted RBP18.3■□□□□ 0.52
ITGB1-210ENST00000474568 GPRASP2Q96D09 838 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 NOC4LQ9BVI4 516 aaKnown RBP18.3■□□□□ 0.52
ITGB1-210ENST00000474568 GLT8D2Q9H1C3 349 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 SLKQ9H2G2 1235 aaPredicted RBP18.3■□□□□ 0.52
ITGB1-210ENST00000474568 JADE2Q9NQC1 790 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 HDAC6Q9UBN7 1215 aa18.3■□□□□ 0.52
ITGB1-210ENST00000474568 EIF5BO60841 1220 aaKnown RBP18.29■□□□□ 0.52
ITGB1-210ENST00000474568 PPFIA4O75335 1185 aa18.29■□□□□ 0.52
ITGB1-210ENST00000474568 F2P00734 622 aa18.29■□□□□ 0.52
ITGB1-210ENST00000474568 SUPT20HL2P0C7V6 817 aa18.29■□□□□ 0.52
ITGB1-210ENST00000474568 AP3B2Q13367 1082 aa18.29■□□□□ 0.52
ITGB1-210ENST00000474568 GDF6Q6KF10 455 aaPredicted RBP18.29■□□□□ 0.52
ITGB1-210ENST00000474568 CPLX2Q6PUV4 134 aaKnown RBP18.29■□□□□ 0.52
ITGB1-210ENST00000474568 TMEM199Q8N511 208 aa18.29■□□□□ 0.52
ITGB1-210ENST00000474568 C7orf31Q8N865 590 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms