RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 GIPC2Q8TF65 315 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 CRELD1Q96HD1 420 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 CHMP4AQ9BY43 222 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 BCL11AQ9H165 835 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 BSDC1Q9NW68 430 aaPredicted RBP8.76□□□□□ -1.01
VPS50-211ENST00000474412 SCAF8Q9UPN6 1271 aaKnown RBP8.76□□□□□ -1.01
VPS50-211ENST00000474412 TNNQ9UQP3 1299 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 KIAA1324LA8MWY0 1029 aaPredicted RBP8.75□□□□□ -1.01
VPS50-211ENST00000474412 CTSHP09668 335 aa8.75□□□□□ -1.01
VPS50-211ENST00000474412 HSP90B1P14625 803 aaKnown RBP8.75□□□□□ -1.01
VPS50-211ENST00000474412 FOSL1P15407 271 aa8.75□□□□□ -1.01
VPS50-211ENST00000474412 IGHMBP2P38935 993 aaKnown RBP8.75□□□□□ -1.01
VPS50-211ENST00000474412 RPS26P62854 115 aaKnown RBP8.75□□□□□ -1.01
VPS50-211ENST00000474412 TNIP1Q15025 636 aa8.75□□□□□ -1.01
VPS50-211ENST00000474412 CST9Q5W186 159 aa8.75□□□□□ -1.01
VPS50-211ENST00000474412 TRMT2AQ8IZ69 625 aaKnown RBP8.75□□□□□ -1.01
VPS50-211ENST00000474412 ANKRD44Q8N8A2 993 aa8.75□□□□□ -1.01
VPS50-211ENST00000474412 GAL3ST3Q96A11 431 aa8.75□□□□□ -1.01
VPS50-211ENST00000474412 PUS3Q9BZE2 481 aaKnown RBP8.75□□□□□ -1.01
VPS50-211ENST00000474412 ZNF408Q9H9D4 720 aa8.75□□□□□ -1.01
VPS50-211ENST00000474412 LRRC4CQ9HCJ2 640 aa8.75□□□□□ -1.01
VPS50-211ENST00000474412 GGA3Q9NZ52 723 aa8.75□□□□□ -1.01
VPS50-211ENST00000474412 COL1A1P02452 1464 aaPredicted RBP8.75□□□□□ -1.01
VPS50-211ENST00000474412 ZNF804BA4D1E1 1349 aa8.75□□□□□ -1.01
VPS50-211ENST00000474412 ATAD5Q96QE3 1844 aa8.75□□□□□ -1.01
VPS50-211ENST00000474412 SSC5DA1L4H1 1573 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 ANKRD18BA2A2Z9 1011 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 PRAMEF27A3QJZ7 478 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 RASSF10A6NK89 507 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 ALDH1L1O75891 902 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 FAM87AP0C7U9 286 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 RLBP1P12271 317 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 ST13P50502 369 aaKnown RBP8.74□□□□□ -1.01
VPS50-211ENST00000474412 SEPT6Q14141 434 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 KLHDC4Q8TBB5 520 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 GMLQ99445 158 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 BICC1Q9H694 974 aaKnown RBP8.74□□□□□ -1.01
VPS50-211ENST00000474412 SMC4Q9NTJ3 1288 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 ABT1Q9ULW3 272 aaKnown RBP8.74□□□□□ -1.01
VPS50-211ENST00000474412 JAG2Q9Y219 1238 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 ZSWIM8A7E2V4 1837 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 FOCADQ5VW36 1801 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 UTYO14607 1347 aa8.74□□□□□ -1.01
VPS50-211ENST00000474412 SASH1O94885 1247 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 CELF2O95319 508 aaKnown RBP8.73□□□□□ -1.01
VPS50-211ENST00000474412 VIL1P09327 827 aaKnown RBP8.73□□□□□ -1.01
VPS50-211ENST00000474412 SPINK2P20155 84 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 PTPN11Q06124 597 aaPredicted RBP8.73□□□□□ -1.01
VPS50-211ENST00000474412 GRM1Q13255 1194 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 CYP27C1Q4G0S4 372 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 DACT2Q5SW24 774 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 CYP4F22Q6NT55 531 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 LRFN4Q6PJG9 635 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 OGFOD3Q6PK18 319 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 AGMOQ6ZNB7 445 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 CDC37L1Q7L3B6 337 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 HDXQ7Z353 690 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 DPF2Q92785 391 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 PLPPR2Q96GM1 343 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 MPHOSPH8Q99549 860 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 NOC4LQ9BVI4 516 aaKnown RBP8.73□□□□□ -1.01
VPS50-211ENST00000474412 C9orf78Q9NZ63 289 aaPredicted RBP8.73□□□□□ -1.01
VPS50-211ENST00000474412 PGAP2Q9UHJ9 254 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 PCDHB5Q9Y5E4 795 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 PCDHAC2Q9Y5I4 1007 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 PTPRCP08575 1304 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 AOX1Q06278 1338 aa8.73□□□□□ -1.01
VPS50-211ENST00000474412 PTPRFP10586 1907 aa8.72□□□□□ -1.01
VPS50-211ENST00000474412 H7C1D1 291 aa8.72□□□□□ -1.01
VPS50-211ENST00000474412 FANCGO15287 622 aa8.72□□□□□ -1.01
VPS50-211ENST00000474412 FOXN1O15353 648 aa8.72□□□□□ -1.01
VPS50-211ENST00000474412 PLIN1O60240 522 aa8.72□□□□□ -1.01
VPS50-211ENST00000474412 RPS12P25398 132 aaKnown RBP8.72□□□□□ -1.01
VPS50-211ENST00000474412 IFIT5Q13325 482 aaKnown RBP8.72□□□□□ -1.01
VPS50-211ENST00000474412 INPP5AQ14642 412 aa8.72□□□□□ -1.01
VPS50-211ENST00000474412 LRRC24Q50LG9 513 aa8.72□□□□□ -1.01
VPS50-211ENST00000474412 WIPI1Q5MNZ9 446 aaPredicted RBP8.72□□□□□ -1.01
VPS50-211ENST00000474412 ZBTB37Q5TC79 503 aa8.72□□□□□ -1.01
VPS50-211ENST00000474412 ANGEL2Q5VTE6 544 aaKnown RBP8.72□□□□□ -1.01
VPS50-211ENST00000474412 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.72□□□□□ -1.01
VPS50-211ENST00000474412 USP48Q86UV5 1035 aa8.72□□□□□ -1.01
VPS50-211ENST00000474412 CERS5Q8N5B7 392 aa8.72□□□□□ -1.01
VPS50-211ENST00000474412 MIR1-1HGQ9H1L0 117 aa8.72□□□□□ -1.01
VPS50-211ENST00000474412 SIPA1L1O43166 1804 aa8.71□□□□□ -1.01
VPS50-211ENST00000474412 MFAP1P55081 439 aaKnown RBP8.71□□□□□ -1.02
VPS50-211ENST00000474412 ZNF280AP59817 542 aaPredicted RBP8.71□□□□□ -1.02
VPS50-211ENST00000474412 NBPF9Q3BBW0 867 aa8.71□□□□□ -1.02
VPS50-211ENST00000474412 ALDH1L2Q3SY69 923 aa8.71□□□□□ -1.02
VPS50-211ENST00000474412 RABL6Q3YEC7 729 aaPredicted RBP8.71□□□□□ -1.02
VPS50-211ENST00000474412 DIEXFQ68CQ4 756 aaKnown RBP8.71□□□□□ -1.02
VPS50-211ENST00000474412 KRT26Q7Z3Y9 468 aa8.71□□□□□ -1.02
VPS50-211ENST00000474412 DTX1Q86Y01 620 aa8.71□□□□□ -1.02
VPS50-211ENST00000474412 KIAA0825Q8IV33 1275 aa8.71□□□□□ -1.02
VPS50-211ENST00000474412 CAPNS2Q96L46 248 aa8.71□□□□□ -1.02
VPS50-211ENST00000474412 USP44Q9H0E7 712 aa8.71□□□□□ -1.02
VPS50-211ENST00000474412 WDR33Q9C0J8 1336 aaKnown RBP8.71□□□□□ -1.02
VPS50-211ENST00000474412 MYH7P12883 1935 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 TFE3P19532 575 aaPredicted RBP8.7□□□□□ -1.02
VPS50-211ENST00000474412 KCNJ4P48050 445 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 RARSP54136 660 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms