RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 GHRP10912 638 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 ATF3P18847 181 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 EHHADHQ08426 723 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 MEI1Q5TIA1 1274 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 PDXDC1Q6P996 788 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 GIGYF2Q6Y7W6 1299 aaKnown RBP20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 CPLX4Q7Z7G2 160 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 CCDC84Q86UT8 332 aaPredicted RBP20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 MAB21L3Q8N8X9 362 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 HPS3Q969F9 1004 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 LRRC45Q96CN5 670 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 TMEM59LQ9UK28 342 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 PLCH1Q4KWH8 1693 aa20.48■□□□□ 0.87
ECHDC1-214ENST00000474289 DDAH1O94760 285 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 ASIC1P78348 528 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 NKX1-1Q15270 411 aaPredicted RBP20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 PFKFB3Q16875 520 aaPredicted RBP20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 HIBCHQ6NVY1 386 aaPredicted RBP20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 DDX42Q86XP3 938 aaKnown RBP eCLIP20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 EIF1ADQ8N9N8 165 aaKnown RBP20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 CUL5Q93034 780 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 BAIAP2L1Q9UHR4 511 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 KCNG1Q9UIX4 513 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 NOVA2Q9UNW9 492 aaKnown RBP20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 PPIP5K2O43314 1243 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 PLCG1P19174 1290 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 DRD4P21917 467 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 KLRC1P26715 233 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 KIAA0895Q8NCT3 520 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 CCDC47Q96A33 483 aaKnown RBP20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 HOOK2Q96ED9 719 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 RSRC1Q96IZ7 334 aaKnown RBP20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 NEUROG2Q9H2A3 272 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 DUOX1Q9NRD9 1551 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 ASAP1Q9ULH1 1129 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 MYH3P11055 1940 aa20.47■□□□□ 0.87
ECHDC1-214ENST00000474289 ORC4O43929 436 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 CCNHP51946 323 aaPredicted RBP20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 CUL1Q13616 776 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 PPP1R7Q15435 360 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 NAB2Q15742 525 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 MAN2A1Q16706 1144 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 AGBL2Q5U5Z8 902 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 RCSD1Q6JBY9 416 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 ADGRA1Q86SQ6 560 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 BLIDQ8IZY5 108 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 STAMBPL1Q96FJ0 436 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 PCDHGC5Q9Y5F6 944 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 MYH7BA7E2Y1 1941 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 MYH1P12882 1939 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 CYP2D7A0A087X1C5 515 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 F8W031 263 aaPredicted RBP20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 KIF3CO14782 793 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 MAGOHP61326 146 aaKnown RBP20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 IRX1P78414 480 aaPredicted RBP20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 C11orf91Q3C1V1 193 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 CACNA2D4Q7Z3S7 1137 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 CEP120Q8N960 986 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 MAGOHBQ96A72 148 aaKnown RBP20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 TRMT112Q9UI30 125 aaKnown RBP20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 FBXL5Q9UKA1 691 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 ARAP2Q8WZ64 1704 aa20.46■□□□□ 0.87
ECHDC1-214ENST00000474289 BUB1BO60566 1050 aaPredicted RBP20.45■□□□□ 0.86
ECHDC1-214ENST00000474289 UBLCP1Q8WVY7 318 aaPredicted RBP20.45■□□□□ 0.86
ECHDC1-214ENST00000474289 EBF2Q9HAK2 575 aa20.45■□□□□ 0.86
ECHDC1-214ENST00000474289 FLT1P17948 1338 aa20.45■□□□□ 0.86
ECHDC1-214ENST00000474289 COL22A1Q8NFW1 1626 aaPredicted RBP20.45■□□□□ 0.86
ECHDC1-214ENST00000474289 FLT3P36888 993 aa20.45■□□□□ 0.86
ECHDC1-214ENST00000474289 CENPPQ6IPU0 288 aa20.45■□□□□ 0.86
ECHDC1-214ENST00000474289 NSMCE1Q8WV22 266 aa20.45■□□□□ 0.86
ECHDC1-214ENST00000474289 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.45■□□□□ 0.86
ECHDC1-214ENST00000474289 TRIM37O94972 964 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 SLC5A1P13866 664 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 PPP1R2P41236 205 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 MYO1EQ12965 1108 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 STAG2Q8N3U4 1231 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 BAZ2AQ9UIF9 1905 aaKnown RBP20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 CALML3P27482 149 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 GRIK3Q13003 919 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 KCTD19Q17RG1 926 aaPredicted RBP20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 CUEDC2Q9H467 287 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 SLC39A2Q9NP94 309 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 NLRC4Q9NPP4 1024 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 TMOD3Q9NYL9 352 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 LRP2BPQ9P2M1 347 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 DLEC1Q9Y238 1755 aa20.44■□□□□ 0.86
ECHDC1-214ENST00000474289 CCT8L1PA6NM43 557 aa20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 TLR2O60603 784 aa20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 ZKSCAN8Q15776 578 aaPredicted RBP20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 SLC9C1Q4G0N8 1177 aa20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 PROCA1Q8NCQ7 364 aaPredicted RBP20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 GPKOWQ92917 476 aaPredicted RBP eCLIP20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 THOC1Q96FV9 657 aaKnown RBP20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 CHMP6Q96FZ7 201 aa20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 C7orf25Q9BPX7 421 aa20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 MAGEF1Q9HAY2 307 aa20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 LRRC4CQ9HCJ2 640 aa20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 KCNK3O14649 394 aa20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 NMT2O60551 498 aa20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 CYP7A1P22680 504 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms