RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 COL20A1Q9P218 1284 aa16.64■□□□□ 0.25
LMNA-213ENST00000473598 INHBEP58166 350 aa16.63■□□□□ 0.25
LMNA-213ENST00000473598 MAP2K1Q02750 393 aaPredicted RBP16.63■□□□□ 0.25
LMNA-213ENST00000473598 SYTL5Q8TDW5 730 aaPredicted RBP16.63■□□□□ 0.25
LMNA-213ENST00000473598 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
LMNA-213ENST00000473598 EPSTI1Q96J88 318 aa16.63■□□□□ 0.25
LMNA-213ENST00000473598 MAF1Q9H063 256 aa16.63■□□□□ 0.25
LMNA-213ENST00000473598 R3HDMLQ9H3Y0 253 aa16.63■□□□□ 0.25
LMNA-213ENST00000473598 FEZ2Q9UHY8 353 aaPredicted RBP16.63■□□□□ 0.25
LMNA-213ENST00000473598 NSMFQ6X4W1 530 aa16.63■□□□□ 0.25
LMNA-213ENST00000473598 SLC30A10Q6XR72 485 aa16.63■□□□□ 0.25
LMNA-213ENST00000473598 ACAD9Q9H845 621 aa16.63■□□□□ 0.25
LMNA-213ENST00000473598 PNMA3Q9UL41 463 aa16.63■□□□□ 0.25
LMNA-213ENST00000473598 SLC45A1Q9Y2W3 748 aa16.63■□□□□ 0.25
LMNA-213ENST00000473598 LCTP09848 1927 aa16.63■□□□□ 0.25
LMNA-213ENST00000473598 RPTORQ8N122 1335 aa16.63■□□□□ 0.25
LMNA-213ENST00000473598 PDHXO00330 501 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 CNMDO75829 334 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 Q4G0T1 1027 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 RIOX2Q8IUF8 465 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 CHST13Q8NET6 341 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 FAM200AQ8TCP9 573 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 HAS1Q92839 578 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 SPATC1LQ9H0A9 340 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 USP25Q9UHP3 1055 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 RABGAP1Q9Y3P9 1069 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 FAM86B1E9PN63 330 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 CTAGE5O15320 804 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 TBC1D8O95759 1140 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 FAM86B2P0C5J1 330 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 CYP2C8P10632 490 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 ZNF76P36508 570 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 TXKP42681 527 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
LMNA-213ENST00000473598 KIF18AQ8NI77 898 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 AK8Q96MA6 479 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 PAGR1Q9BTK6 254 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 KCNMB3Q9NPA1 279 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 FAM53CQ9NYF3 392 aa16.62■□□□□ 0.25
LMNA-213ENST00000473598 FRMPD4Q14CM0 1322 aa16.61■□□□□ 0.25
LMNA-213ENST00000473598 POLR2DO15514 142 aaKnown RBP16.61■□□□□ 0.25
LMNA-213ENST00000473598 PEX10O60683 326 aa16.61■□□□□ 0.25
LMNA-213ENST00000473598 HSPA1AP0DMV8 641 aaKnown RBP16.61■□□□□ 0.25
LMNA-213ENST00000473598 HSPA1BP0DMV9 641 aaKnown RBP16.61■□□□□ 0.25
LMNA-213ENST00000473598 FXR2P51116 673 aaKnown RBP eCLIP16.61■□□□□ 0.252e-7■■□□□ 13.3
LMNA-213ENST00000473598 UBXN2AP68543 259 aa16.61■□□□□ 0.25
LMNA-213ENST00000473598 BAATQ14032 418 aaPredicted RBP16.61■□□□□ 0.25
LMNA-213ENST00000473598 PRR16Q569H4 304 aa16.61■□□□□ 0.25
LMNA-213ENST00000473598 ANKRD23Q86SG2 305 aa16.61■□□□□ 0.25
LMNA-213ENST00000473598 REM2Q8IYK8 340 aaPredicted RBP16.61■□□□□ 0.25
LMNA-213ENST00000473598 IGSF22Q8N9C0 903 aa16.61■□□□□ 0.25
LMNA-213ENST00000473598 KIAA1524Q8TCG1 905 aa16.61■□□□□ 0.25
LMNA-213ENST00000473598 LENG9Q96B70 501 aa16.61■□□□□ 0.25
LMNA-213ENST00000473598 TAAR1Q96RJ0 339 aa16.61■□□□□ 0.25
LMNA-213ENST00000473598 RBPJLQ9UBG7 517 aa16.61■□□□□ 0.25
LMNA-213ENST00000473598 TECP42680 631 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 CRHR2Q13324 411 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 TMEM266Q2M3C6 531 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 SDF4Q9BRK5 362 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 BEGAINQ9BUH8 593 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 TXNRD2Q9NNW7 524 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 A1CFQ9NQ94 594 aaKnown RBP16.6■□□□□ 0.25
LMNA-213ENST00000473598 FBXO40Q9UH90 709 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 IGLV3-22A0A075B6J6 115 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 TBX3O15119 743 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 MARCH6O60337 910 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 TAF1CQ15572 869 aaPredicted RBP16.6■□□□□ 0.25
LMNA-213ENST00000473598 LONRF3Q496Y0 759 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 KRBA2Q6ZNG9 492 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 PDILTQ8N807 584 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 GTF3C2Q8WUA4 911 aaPredicted RBP16.6■□□□□ 0.25
LMNA-213ENST00000473598 TTC12Q9H892 705 aaPredicted RBP16.6■□□□□ 0.25
LMNA-213ENST00000473598 CYP39A1Q9NYL5 469 aa16.6■□□□□ 0.25
LMNA-213ENST00000473598 A0A087X0B3 334 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 FOXN1O15353 648 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 ADCY5O95622 1261 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 CDC25AP30304 524 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 TXLNAP40222 546 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 PDIA5Q14554 519 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 ANO6Q4KMQ2 910 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 SLFN12Q8IYM2 578 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 CYP2W1Q8TAV3 490 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 ETNPPLQ8TBG4 499 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 RMDN3Q96TC7 470 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 MOV10L1Q9BXT6 1211 aaKnown RBP16.59■□□□□ 0.25
LMNA-213ENST00000473598 RAB34Q9BZG1 259 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 CCSER1Q9C0I3 900 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 PCDHA12Q9UN75 941 aa16.59■□□□□ 0.25
LMNA-213ENST00000473598 ZNFX1Q9P2E3 1918 aaKnown RBP16.59■□□□□ 0.25
LMNA-213ENST00000473598 PP2D1A8MPX8 630 aa16.58■□□□□ 0.25
LMNA-213ENST00000473598 SLC25A27O95847 323 aa16.58■□□□□ 0.25
LMNA-213ENST00000473598 CEP55Q53EZ4 464 aa16.58■□□□□ 0.25
LMNA-213ENST00000473598 PCNX4Q63HM2 1172 aa16.58■□□□□ 0.25
LMNA-213ENST00000473598 CNNM3Q8NE01 707 aa16.58■□□□□ 0.25
LMNA-213ENST00000473598 PXMP2Q9NR77 195 aa16.58■□□□□ 0.25
LMNA-213ENST00000473598 SMTNL1A8MU46 457 aa16.58■□□□□ 0.24
LMNA-213ENST00000473598 COPB2P35606 906 aa16.58■□□□□ 0.24
LMNA-213ENST00000473598 UBA7P41226 1012 aa16.58■□□□□ 0.24
LMNA-213ENST00000473598 PGM5Q15124 567 aa16.58■□□□□ 0.24
LMNA-213ENST00000473598 Q3C1V9 767 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms