RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 WWC2Q6AWC2 1192 aa17.9■□□□□ 0.46
MRPL55-226ENST00000473066 GPR153Q6NV75 609 aa17.9■□□□□ 0.46
MRPL55-226ENST00000473066 PSRC1Q6PGN9 363 aaPredicted RBP17.9■□□□□ 0.46
MRPL55-226ENST00000473066 INPP4AQ96PE3 977 aaPredicted RBP17.9■□□□□ 0.46
MRPL55-226ENST00000473066 GLT8D2Q9H1C3 349 aa17.9■□□□□ 0.46
MRPL55-226ENST00000473066 CYP46A1Q9Y6A2 500 aa17.9■□□□□ 0.46
MRPL55-226ENST00000473066 V9GY48 417 aaPredicted RBP17.9■□□□□ 0.46
MRPL55-226ENST00000473066 RANBP2P49792 3224 aaKnown RBP17.89■□□□□ 0.46
MRPL55-226ENST00000473066 CDC27P30260 824 aa17.89■□□□□ 0.45
MRPL55-226ENST00000473066 MRPS9P82933 396 aaKnown RBP17.89■□□□□ 0.45
MRPL55-226ENST00000473066 NEDD9Q14511 834 aa17.89■□□□□ 0.45
MRPL55-226ENST00000473066 TEX2Q8IWB9 1127 aa17.89■□□□□ 0.45
MRPL55-226ENST00000473066 CCDC155Q8N6L0 562 aa17.89■□□□□ 0.45
MRPL55-226ENST00000473066 CDHR1Q96JP9 859 aa17.89■□□□□ 0.45
MRPL55-226ENST00000473066 NOC4LQ9BVI4 516 aaKnown RBP17.89■□□□□ 0.45
MRPL55-226ENST00000473066 MTIF3Q9H2K0 278 aaKnown RBP17.89■□□□□ 0.45
MRPL55-226ENST00000473066 TRMT13Q9NUP7 481 aaKnown RBP17.89■□□□□ 0.45
MRPL55-226ENST00000473066 RTEL1Q9NZ71 1219 aa17.89■□□□□ 0.45
MRPL55-226ENST00000473066 SCN5AQ14524 2016 aa17.89■□□□□ 0.45
MRPL55-226ENST00000473066 NID2Q14112 1375 aa17.89■□□□□ 0.45
MRPL55-226ENST00000473066 ZNF286BP0CG31 522 aa17.88■□□□□ 0.45
MRPL55-226ENST00000473066 CSF2RAP15509 400 aa17.88■□□□□ 0.45
MRPL55-226ENST00000473066 ICAM3P32942 547 aa17.88■□□□□ 0.45
MRPL55-226ENST00000473066 PSEN2P49810 448 aa17.88■□□□□ 0.45
MRPL55-226ENST00000473066 MYSM1Q5VVJ2 828 aa17.88■□□□□ 0.45
MRPL55-226ENST00000473066 RUFY3Q7L099 469 aa17.88■□□□□ 0.45
MRPL55-226ENST00000473066 FBXL16Q8N461 479 aa17.88■□□□□ 0.45
MRPL55-226ENST00000473066 C7orf31Q8N865 590 aa17.88■□□□□ 0.45
MRPL55-226ENST00000473066 CCDC12Q8WUD4 166 aaPredicted RBP17.88■□□□□ 0.45
MRPL55-226ENST00000473066 ALG1Q9BT22 464 aa17.88■□□□□ 0.45
MRPL55-226ENST00000473066 USP26Q9BXU7 913 aa17.88■□□□□ 0.45
MRPL55-226ENST00000473066 CYP2C9P11712 490 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 ADD1P35611 737 aaKnown RBP17.87■□□□□ 0.45
MRPL55-226ENST00000473066 EPHB4P54760 987 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 CCL23P55773 120 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 FUT2Q10981 343 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 MFSD10Q14728 455 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 RETREG2Q8NC44 543 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 GIMAP8Q8ND71 665 aaPredicted RBP17.87■□□□□ 0.45
MRPL55-226ENST00000473066 GPRASP2Q96D09 838 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 AGXT2Q9BYV1 514 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 TM6SF1Q9BZW5 370 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 IL23AQ9NPF7 189 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 RIC8AQ9NPQ8 531 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 BARHL2Q9NY43 387 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 PCDHA6Q9UN73 950 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 PCDHA8Q9Y5H6 950 aa17.87■□□□□ 0.45
MRPL55-226ENST00000473066 STXBP3O00186 592 aa17.86■□□□□ 0.45
MRPL55-226ENST00000473066 PPFIA4O75335 1185 aa17.86■□□□□ 0.45
MRPL55-226ENST00000473066 F2P00734 622 aa17.86■□□□□ 0.45
MRPL55-226ENST00000473066 FOSP01100 380 aaPredicted RBP17.86■□□□□ 0.45
MRPL55-226ENST00000473066 SCG2P13521 617 aa17.86■□□□□ 0.45
MRPL55-226ENST00000473066 BFSP2Q13515 415 aa17.86■□□□□ 0.45
MRPL55-226ENST00000473066 PTGISQ16647 500 aa17.86■□□□□ 0.45
MRPL55-226ENST00000473066 PFKFB3Q16875 520 aaPredicted RBP17.86■□□□□ 0.45
MRPL55-226ENST00000473066 KIAA0753Q2KHM9 967 aa17.86■□□□□ 0.45
MRPL55-226ENST00000473066 HSDL1Q3SXM5 330 aa17.86■□□□□ 0.45
MRPL55-226ENST00000473066 METTL7BQ6UX53 244 aa17.86■□□□□ 0.45
MRPL55-226ENST00000473066 PPP1R13LQ8WUF5 828 aa17.86■□□□□ 0.45
MRPL55-226ENST00000473066 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.86■□□□□ 0.452e-7■■■□□ 15.6
MRPL55-226ENST00000473066 ZSWIM6Q9HCJ5 1215 aa17.86■□□□□ 0.45
MRPL55-226ENST00000473066 FAM217BQ9NTX9 383 aaPredicted RBP17.86■□□□□ 0.45
MRPL55-226ENST00000473066 UMODL1Q5DID0 1318 aa17.86■□□□□ 0.45
MRPL55-226ENST00000473066 SMCO2A6NFE2 343 aa17.85■□□□□ 0.45
MRPL55-226ENST00000473066 SPATA31C2B4DYI2 1134 aa17.85■□□□□ 0.45
MRPL55-226ENST00000473066 HOXD8P13378 290 aaPredicted RBP17.85■□□□□ 0.45
MRPL55-226ENST00000473066 SP2Q02086 613 aa17.85■□□□□ 0.45
MRPL55-226ENST00000473066 AP3B2Q13367 1082 aa17.85■□□□□ 0.45
MRPL55-226ENST00000473066 ZNF697Q5TEC3 545 aa17.85■□□□□ 0.45
MRPL55-226ENST00000473066 CPLX2Q6PUV4 134 aaKnown RBP17.85■□□□□ 0.45
MRPL55-226ENST00000473066 CYFIP1Q7L576 1253 aa17.85■□□□□ 0.45
MRPL55-226ENST00000473066 SESTD1Q86VW0 696 aa17.85■□□□□ 0.45
MRPL55-226ENST00000473066 RPUSD2Q8IZ73 545 aaKnown RBP17.85■□□□□ 0.45
MRPL55-226ENST00000473066 DEFB123Q8N688 67 aa17.85■□□□□ 0.45
MRPL55-226ENST00000473066 GBF1Q92538 1859 aa17.85■□□□□ 0.45
MRPL55-226ENST00000473066 KAT2BQ92831 832 aa17.85■□□□□ 0.45
MRPL55-226ENST00000473066 ANO3Q9BYT9 981 aa17.85■□□□□ 0.45
MRPL55-226ENST00000473066 UPF3BQ9BZI7 483 aaKnown RBP17.85■□□□□ 0.45
MRPL55-226ENST00000473066 CPLX1O14810 134 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 ACRP10323 421 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 SMAD3P84022 425 aaKnown RBP17.84■□□□□ 0.45
MRPL55-226ENST00000473066 SP4Q02446 784 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 SEMA3FQ13275 785 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 MTMR1Q13613 665 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 TMEM240Q5SV17 173 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 TYW1BQ6NUM6 668 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 TRIM22Q8IYM9 498 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 CCDC148Q8NFR7 591 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 SCLYQ96I15 445 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 SENP7Q9BQF6 1050 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 RNF26Q9BY78 433 aaPredicted RBP17.84■□□□□ 0.45
MRPL55-226ENST00000473066 WNT8AQ9H1J5 351 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 C6orf50Q9HD87 102 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 GTF2IRD1Q9UHL9 959 aa17.84■□□□□ 0.45
MRPL55-226ENST00000473066 ZNF215Q9UL58 517 aaPredicted RBP17.84■□□□□ 0.45
MRPL55-226ENST00000473066 PITPNM1O00562 1244 aa17.83■□□□□ 0.44
MRPL55-226ENST00000473066 PRPF3O43395 683 aaKnown RBP17.83■□□□□ 0.44
MRPL55-226ENST00000473066 FGBP02675 491 aa17.83■□□□□ 0.44
MRPL55-226ENST00000473066 LGALS2P05162 132 aa17.83■□□□□ 0.44
MRPL55-226ENST00000473066 PFKMP08237 780 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 218 ms