RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 SEPT6Q14141 434 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 TAF1CQ15572 869 aaPredicted RBP4.46□□□□□ -1.7
XRN1-209ENST00000472625 CCDC85BQ15834 202 aaPredicted RBP4.46□□□□□ -1.7
XRN1-209ENST00000472625 CPSF6Q16630 551 aaKnown RBP eCLIP4.46□□□□□ -1.7
XRN1-209ENST00000472625 PROSER3Q2NL68 480 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 TBC1D10BQ4KMP7 808 aaPredicted RBP4.46□□□□□ -1.7
XRN1-209ENST00000472625 ERMP1Q7Z2K6 904 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 USP48Q86UV5 1035 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 C12orf40Q86WS4 652 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 APOBEC3FQ8IUX4 373 aaKnown RBP4.46□□□□□ -1.7
XRN1-209ENST00000472625 ANKRD18AQ8IVF6 992 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 PLD6Q8N2A8 252 aaKnown RBP4.46□□□□□ -1.7
XRN1-209ENST00000472625 TBC1D16Q8TBP0 767 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 FAM89AQ96GI7 184 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 PLPPR2Q96GM1 343 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 ISCA1Q9BUE6 129 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 STK31Q9BXU1 1019 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 ATXN3LQ9H3M9 355 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 DBNDD1Q9H9R9 158 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 MYOZ2Q9NPC6 264 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 PAK6Q9NQU5 681 aaPredicted RBP4.46□□□□□ -1.7
XRN1-209ENST00000472625 BSDC1Q9NW68 430 aaPredicted RBP4.46□□□□□ -1.7
XRN1-209ENST00000472625 IFT57Q9NWB7 429 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 CWC25Q9NXE8 425 aaPredicted RBP4.46□□□□□ -1.7
XRN1-209ENST00000472625 HDAC9Q9UKV0 1011 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 CSADQ9Y600 493 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 LAMB2P55268 1798 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 FAM155AB1AL88 458 aaPredicted RBP4.45□□□□□ -1.7
XRN1-209ENST00000472625 F6X3S4 739 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 MYO1BO43795 1136 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 SORBS3O60504 671 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 WDHD1O75717 1129 aaPredicted RBP4.45□□□□□ -1.7
XRN1-209ENST00000472625 PCCAP05165 728 aaPredicted RBP4.45□□□□□ -1.7
XRN1-209ENST00000472625 SLFN14P0C7P3 912 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 IGHMBP2P38935 993 aaKnown RBP4.45□□□□□ -1.7
XRN1-209ENST00000472625 INHBEP58166 350 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 KIF23Q02241 960 aaPredicted RBP4.45□□□□□ -1.7
XRN1-209ENST00000472625 SLBPQ14493 270 aaKnown RBP eCLIP4.45□□□□□ -1.7
XRN1-209ENST00000472625 ARHGEF6Q15052 776 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 NKG7Q16617 165 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 STRIP1Q5VSL9 837 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 CCDC30Q5VVM6 783 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 OTUD7BQ6GQQ9 843 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 OGFOD3Q6PK18 319 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 ARMC9Q7Z3E5 817 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 SMYD4Q8IYR2 804 aaPredicted RBP4.45□□□□□ -1.7
XRN1-209ENST00000472625 GIPC2Q8TF65 315 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 CELF1Q92879 486 aaKnown RBP4.45□□□□□ -1.7
XRN1-209ENST00000472625 CDCA5Q96FF9 252 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 HEXIM2Q96MH2 286 aaKnown RBP4.45□□□□□ -1.7
XRN1-209ENST00000472625 DUSP23Q9BVJ7 150 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 ANKRD2Q9GZV1 360 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 COA1Q9GZY4 146 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 MYH16Q9H6N6 1097 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 CBX8Q9HC52 389 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 KCNQ5Q9NR82 932 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 POLLQ9UGP5 575 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 PCDHA4Q9UN74 947 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 LAS1LQ9Y4W2 734 aaKnown RBP4.45□□□□□ -1.7
XRN1-209ENST00000472625 PPP2R3BQ9Y5P8 575 aa4.45□□□□□ -1.7
XRN1-209ENST00000472625 ADM5C9JUS6 153 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 ANXA1P04083 346 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 ZBTB48P10074 688 aaPredicted RBP4.44□□□□□ -1.7
XRN1-209ENST00000472625 KCNJ4P48050 445 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 CTSWP56202 376 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 GPSM2P81274 684 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 TNFAIP1Q13829 316 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 MAP3K11Q16584 847 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 ANGEL2Q5VTE6 544 aaKnown RBP4.44□□□□□ -1.7
XRN1-209ENST00000472625 INTS3Q68E01 1043 aaKnown RBP4.44□□□□□ -1.7
XRN1-209ENST00000472625 CBLL1Q75N03 491 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 SPRED2Q7Z698 418 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 RASAL3Q86YV0 1011 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 BCL7CQ8WUZ0 217 aaPredicted RBP4.44□□□□□ -1.7
XRN1-209ENST00000472625 FBXL18Q96ME1 805 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 MPHOSPH8Q99549 860 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 COPRSQ9NQ92 184 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 RNF186Q9NXI6 227 aa4.44□□□□□ -1.7
XRN1-209ENST00000472625 BRCA2P51587 3418 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 DLG5Q8TDM6 1919 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 RBM47A0AV96 593 aaKnown RBP4.43□□□□□ -1.7
XRN1-209ENST00000472625 MANSC4A6NHS7 340 aaPredicted RBP4.43□□□□□ -1.7
XRN1-209ENST00000472625 FANCGO15287 622 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 EOMESO95936 686 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 ITIH2P19823 946 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 CAP2P40123 477 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 TXKP42681 527 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 FGD1P98174 961 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 CYP27A1Q02318 531 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 LRRC14Q15048 493 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 PLCL1Q15111 1095 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 SUPT20HL1Q3ZLR7 823 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 TMCO4Q5TGY1 634 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 FBXO46Q6PJ61 603 aaPredicted RBP4.43□□□□□ -1.7
XRN1-209ENST00000472625 KSR2Q6VAB6 950 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 BNC2Q6ZN30 1099 aaPredicted RBP4.43□□□□□ -1.7
XRN1-209ENST00000472625 TOP6BLQ8N6T0 577 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 MYD88Q99836 296 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 RSRP1Q9BUV0 290 aa4.43□□□□□ -1.7
XRN1-209ENST00000472625 PLAGL2Q9UPG8 496 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms