RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 OSBPL7Q9BZF2 842 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 UBA5Q9GZZ9 404 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 LINC01553A4QN01 128 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 STK25O00506 426 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 NKRFO15226 690 aaKnown RBP eCLIP10.96□□□□□ -0.65
VCL-204ENST00000472585 EFCAB14O75071 495 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 GJB5O95377 273 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 PARNO95453 639 aaKnown RBP10.96□□□□□ -0.65
VCL-204ENST00000472585 CXCL10P02778 98 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 MMP3P08254 477 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 MX1P20591 662 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 PTPN5P54829 565 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 HAND2P61296 217 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 FOXK2Q01167 660 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 TRIM71Q2Q1W2 868 aaKnown RBP10.96□□□□□ -0.65
VCL-204ENST00000472585 PPP4R3BQ5MIZ7 849 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 FAM117BQ6P1L5 589 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 SEPT14Q6ZU15 432 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 SESTD1Q86VW0 696 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 TBC1D10CQ8IV04 446 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 DNERQ8NFT8 737 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 NEK9Q8TD19 979 aa10.96□□□□□ -0.65
VCL-204ENST00000472585 SYTL5Q8TDW5 730 aaPredicted RBP10.96□□□□□ -0.65
VCL-204ENST00000472585 ZFHX2Q9C0A1 2572 aaPredicted RBP10.96□□□□□ -0.66
VCL-204ENST00000472585 WDR19Q8NEZ3 1342 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 CFAP54Q96N23 3096 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 ABHD14A-ACY1A0A1B0GW23 586 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 HSPD1P10809 573 aaKnown RBP10.95□□□□□ -0.66
VCL-204ENST00000472585 CKBP12277 381 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 SELPP16109 830 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 ZP2Q05996 745 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 RBL2Q08999 1139 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 IKBKEQ14164 716 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 USH1GQ495M9 461 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 TIGD5Q53EQ6 642 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.95□□□□□ -0.66
VCL-204ENST00000472585 CHST3Q7LGC8 479 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 ADHFE1Q8IWW8 467 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 RGS22Q8NE09 1264 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 MRPL38Q96DV4 380 aaKnown RBP10.95□□□□□ -0.66
VCL-204ENST00000472585 PHOX2BQ99453 314 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 MPHOSPH6Q99547 160 aaKnown RBP10.95□□□□□ -0.66
VCL-204ENST00000472585 POP1Q99575 1024 aaKnown RBP10.95□□□□□ -0.66
VCL-204ENST00000472585 PRRX2Q99811 253 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 ZKSCAN3Q9BRR0 538 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 TOMM22Q9NS69 142 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 HDAC6Q9UBN7 1215 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 DDX41Q9UJV9 622 aaKnown RBP10.95□□□□□ -0.66
VCL-204ENST00000472585 INSL6Q9Y581 213 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 STK24Q9Y6E0 443 aa10.95□□□□□ -0.66
VCL-204ENST00000472585 HAS3O00219 553 aa10.94□□□□□ -0.66
VCL-204ENST00000472585 OPLAHO14841 1288 aa10.94□□□□□ -0.66
VCL-204ENST00000472585 RGS20O76081 388 aa10.94□□□□□ -0.66
VCL-204ENST00000472585 ZNF618Q5T7W0 954 aa10.94□□□□□ -0.66
VCL-204ENST00000472585 DIEXFQ68CQ4 756 aaKnown RBP10.94□□□□□ -0.66
VCL-204ENST00000472585 LRRC8DQ7L1W4 858 aa10.94□□□□□ -0.66
VCL-204ENST00000472585 BANK1Q8NDB2 785 aa10.94□□□□□ -0.66
VCL-204ENST00000472585 ANKS1AQ92625 1134 aa10.94□□□□□ -0.66
VCL-204ENST00000472585 PABPC5Q96DU9 382 aaKnown RBP10.94□□□□□ -0.66
VCL-204ENST00000472585 C17orf80Q9BSJ5 609 aa10.94□□□□□ -0.66
VCL-204ENST00000472585 BCAS3Q9H6U6 928 aa10.94□□□□□ -0.66
VCL-204ENST00000472585 HELLSQ9NRZ9 838 aa10.94□□□□□ -0.66
VCL-204ENST00000472585 GTF2IRD1Q9UHL9 959 aa10.94□□□□□ -0.66
VCL-204ENST00000472585 C5orf42Q9H799 3197 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 USP34Q70CQ2 3546 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 MYO7AQ13402 2215 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 NEDD4P46934 1319 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 MICAL3Q7RTP6 2002 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 GH1P01241 217 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 IRS1P35568 1242 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 PSEN2P49810 448 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 PDE1AP54750 535 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 NMIQ13287 307 aaPredicted RBP10.93□□□□□ -0.66
VCL-204ENST00000472585 PKN1Q16512 942 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 SUGP1Q8IWZ8 645 aaKnown RBP10.93□□□□□ -0.66
VCL-204ENST00000472585 ADGRF4Q8IZF3 695 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 EVI5LQ96CN4 794 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 TTC14Q96N46 770 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 SAMD11Q96NU1 681 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 CLDND1Q9NY35 253 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 MUTYHQ9UIF7 546 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 PTPRZ1P23471 2315 aaPredicted RBP10.93□□□□□ -0.66
VCL-204ENST00000472585 NLRC5Q86WI3 1866 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 TECTAO75443 2155 aa10.93□□□□□ -0.66
VCL-204ENST00000472585 NCK2O43639 380 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 GFRA3O60609 400 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 AMHP03971 560 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 ZNF286BP0CG31 522 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 SP2Q02086 613 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 GPM6BQ13491 265 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 MCMDC2Q4G0Z9 681 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 TCEAL5Q5H9L2 206 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 PRSS33Q8NF86 280 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 PBXIP1Q96AQ6 731 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 ALG1Q9BT22 464 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 OCEL1Q9H607 264 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 NSUN3Q9H649 340 aaKnown RBP10.92□□□□□ -0.66
VCL-204ENST00000472585 JMJD4Q9H9V9 463 aa10.92□□□□□ -0.66
VCL-204ENST00000472585 B4DLN1 442 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 SORBS3O60504 671 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms