RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 CTR9Q6PD62 1173 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 AACSQ86V21 672 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 AFG1LQ8WV93 481 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 MKL1Q969V6 931 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 SEMA4AQ9H3S1 761 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 CLEC1BQ9P126 229 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 SPTBN2O15020 2390 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 KIAA1671Q9BY89 1806 aa12.16□□□□□ -0.46
CDHR3-209ENST00000472116 ATRXP46100 2492 aa12.15□□□□□ -0.46
CDHR3-209ENST00000472116 FSD2A1L4K1 749 aa12.15□□□□□ -0.46
CDHR3-209ENST00000472116 GH1P01241 217 aa12.15□□□□□ -0.46
CDHR3-209ENST00000472116 LMNAP02545 664 aaKnown RBP12.15□□□□□ -0.46
CDHR3-209ENST00000472116 CT47B1P0C2W7 299 aaPredicted RBP12.15□□□□□ -0.46
CDHR3-209ENST00000472116 SRGAP2BP0DMP2 458 aa12.15□□□□□ -0.46
CDHR3-209ENST00000472116 CALML3P27482 149 aa12.15□□□□□ -0.46
CDHR3-209ENST00000472116 MBTPS1Q14703 1052 aa12.15□□□□□ -0.46
CDHR3-209ENST00000472116 DGKDQ16760 1214 aa12.15□□□□□ -0.46
CDHR3-209ENST00000472116 PLVAPQ9BX97 442 aa12.15□□□□□ -0.46
CDHR3-209ENST00000472116 BARX2Q9UMQ3 279 aaPredicted RBP12.15□□□□□ -0.46
CDHR3-209ENST00000472116 PKD1L2Q7Z442 2459 aa12.15□□□□□ -0.46
CDHR3-209ENST00000472116 CHD8Q9HCK8 2581 aa12.15□□□□□ -0.47
CDHR3-209ENST00000472116 ADGRA3Q8IWK6 1321 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 NRIP1P48552 1158 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 PSEN2P49810 448 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 CLCN6P51797 869 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 TRAF7Q6Q0C0 670 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 CHST3Q7LGC8 479 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 KREMEN2Q8NCW0 462 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 SSH3Q8TE77 659 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 ARHGAP45Q92619 1136 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 APBB2Q92870 758 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 CEP95Q96GE4 821 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 HAUS7Q99871 368 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 MTMR4Q9NYA4 1195 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 SORCS3Q9UPU3 1222 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 NR2E1Q9Y466 385 aa12.14□□□□□ -0.47
CDHR3-209ENST00000472116 MINDY4BA8MYZ0 360 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 PLA2G6O60733 806 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 BCAR3O75815 825 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 ICAM1P05362 532 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 CLCN5P51795 746 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 SNAP25P60880 206 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 BTG3Q14201 252 aaPredicted RBP12.13□□□□□ -0.47
CDHR3-209ENST00000472116 MFSD10Q14728 455 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 KIAA0753Q2KHM9 967 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 TRIM71Q2Q1W2 868 aaKnown RBP12.13□□□□□ -0.47
CDHR3-209ENST00000472116 RNF207Q6ZRF8 634 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 RBM23Q86U06 439 aaKnown RBP12.13□□□□□ -0.47
CDHR3-209ENST00000472116 ERC1Q8IUD2 1116 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 KAT2BQ92831 832 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 GMCL1Q96IK5 515 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 NEK1Q96PY6 1258 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 PCDHGC5Q9Y5F6 944 aa12.13□□□□□ -0.47
CDHR3-209ENST00000472116 ZBED9Q6R2W3 1325 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 PLXNA4Q9HCM2 1894 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 TTC3P53804 2025 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 IPO8O15397 1037 aaKnown RBP12.12□□□□□ -0.47
CDHR3-209ENST00000472116 TSPY3P0CV98 308 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 TSPY8P0CW00 308 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 SDHBP21912 280 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 MCCP23508 829 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 ADD2P35612 726 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 ATP8B2P98198 1209 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 NAALADL2Q58DX5 795 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 PPP4R3BQ5MIZ7 849 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 ADGRD2Q7Z7M1 963 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 DNERQ8NFT8 737 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 P2RX5Q93086 422 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 CHMP4CQ96CF2 233 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 CHAMP1Q96JM3 812 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 TLE6Q9H808 572 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 TSHZ2Q9NRE2 1034 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 PNMA2Q9UL42 364 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 PRR12Q9ULL5 1215 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 PLAGL2Q9UPG8 496 aa12.12□□□□□ -0.47
CDHR3-209ENST00000472116 NOP58Q9Y2X3 529 aaKnown RBP12.12□□□□□ -0.47
CDHR3-209ENST00000472116 IGKV6D-41A0A0C4DH26 115 aa12.11□□□□□ -0.47
CDHR3-209ENST00000472116 NFIBO00712 420 aa12.11□□□□□ -0.47
CDHR3-209ENST00000472116 SP100P23497 879 aaPredicted RBP12.11□□□□□ -0.47
CDHR3-209ENST00000472116 SLFN5Q08AF3 891 aa12.11□□□□□ -0.47
CDHR3-209ENST00000472116 ANGPT1Q15389 498 aa12.11□□□□□ -0.47
CDHR3-209ENST00000472116 SLC30A10Q6XR72 485 aa12.11□□□□□ -0.47
CDHR3-209ENST00000472116 KCTD1Q719H9 257 aa12.11□□□□□ -0.47
CDHR3-209ENST00000472116 FLCNQ8NFG4 579 aa12.11□□□□□ -0.47
CDHR3-209ENST00000472116 MICAL1Q8TDZ2 1067 aa12.11□□□□□ -0.47
CDHR3-209ENST00000472116 CLP1Q92989 425 aaKnown RBP12.11□□□□□ -0.47
CDHR3-209ENST00000472116 WNT8BQ93098 351 aa12.11□□□□□ -0.47
CDHR3-209ENST00000472116 DLL3Q9NYJ7 618 aa12.11□□□□□ -0.47
CDHR3-209ENST00000472116 FAM208BQ5VWN6 2430 aa12.11□□□□□ -0.47
CDHR3-209ENST00000472116 WDR87Q6ZQQ6 2873 aa12.11□□□□□ -0.47
CDHR3-209ENST00000472116 FANCMQ8IYD8 2048 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 MYH6P13533 1939 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.1□□□□□ -0.47
CDHR3-209ENST00000472116 CAND2O75155 1236 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 ARIH2O95376 493 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 F2P00734 622 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 ZNF286BP0CG31 522 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 ARHGAP1Q07960 439 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 COL9A2Q14055 689 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms