RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 STXBP3O00186 592 aa17.32■□□□□ 0.36
CALD1-215ENST00000472096 ARVCFO00192 962 aa17.32■□□□□ 0.36
CALD1-215ENST00000472096 GH1P01241 217 aa17.32■□□□□ 0.36
CALD1-215ENST00000472096 CDK7P50613 346 aa17.32■□□□□ 0.36
CALD1-215ENST00000472096 ANAPC15P60006 121 aa17.32■□□□□ 0.36
CALD1-215ENST00000472096 ARHGAP1Q07960 439 aa17.32■□□□□ 0.36
CALD1-215ENST00000472096 UBE2SQ16763 222 aa17.32■□□□□ 0.36
CALD1-215ENST00000472096 TYW1BQ6NUM6 668 aa17.32■□□□□ 0.36
CALD1-215ENST00000472096 SH3RF1Q7Z6J0 888 aa17.32■□□□□ 0.36
CALD1-215ENST00000472096 TOX2Q96NM4 488 aa17.32■□□□□ 0.36
CALD1-215ENST00000472096 POLR3EQ9NVU0 708 aa17.32■□□□□ 0.36
CALD1-215ENST00000472096 DDX41Q9UJV9 622 aaKnown RBP17.32■□□□□ 0.36
CALD1-215ENST00000472096 V9GY48 417 aaPredicted RBP17.32■□□□□ 0.36
CALD1-215ENST00000472096 TRIM43BA6NCK2 446 aa17.31■□□□□ 0.36
CALD1-215ENST00000472096 A6NJR5 290 aa17.31■□□□□ 0.36
CALD1-215ENST00000472096 EIF5BO60841 1220 aaKnown RBP17.31■□□□□ 0.36
CALD1-215ENST00000472096 MYL3P08590 195 aa17.31■□□□□ 0.36
CALD1-215ENST00000472096 C7P10643 843 aa17.31■□□□□ 0.36
CALD1-215ENST00000472096 PDIA3P30101 505 aaKnown RBP17.31■□□□□ 0.36
CALD1-215ENST00000472096 BMP8BP34820 402 aa17.31■□□□□ 0.36
CALD1-215ENST00000472096 NAPAP54920 295 aa17.31■□□□□ 0.36
CALD1-215ENST00000472096 MRPS9P82933 396 aaKnown RBP17.31■□□□□ 0.36
CALD1-215ENST00000472096 PURAQ00577 322 aaKnown RBP17.31■□□□□ 0.36
CALD1-215ENST00000472096 MDM2Q00987 491 aaPredicted RBP17.31■□□□□ 0.36
CALD1-215ENST00000472096 BRDTQ58F21 947 aaPredicted RBP17.31■□□□□ 0.36
CALD1-215ENST00000472096 SLC43A3Q8NBI5 491 aa17.31■□□□□ 0.36
CALD1-215ENST00000472096 TRIM43Q96BQ3 446 aaPredicted RBP17.31■□□□□ 0.36
CALD1-215ENST00000472096 GRIN2DO15399 1336 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 A0A1W2PPC1 479 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 DCDC2CA8MYV0 355 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 STAM2O75886 525 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 PSMC6P62333 389 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 FAAP100Q0VG06 881 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 ITGA7Q13683 1181 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 NTRK3Q16288 839 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 PFKFB3Q16875 520 aaPredicted RBP17.3■□□□□ 0.36
CALD1-215ENST00000472096 PCNX4Q63HM2 1172 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 KCNV1Q6PIU1 500 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 FAM126BQ8IXS8 530 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 AFG1LQ8WV93 481 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 EMID1Q96A84 441 aaPredicted RBP17.3■□□□□ 0.36
CALD1-215ENST00000472096 IL17RAQ96F46 866 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 INPP4AQ96PE3 977 aaPredicted RBP17.3■□□□□ 0.36
CALD1-215ENST00000472096 LARP6Q9BRS8 491 aaKnown RBP17.3■□□□□ 0.36
CALD1-215ENST00000472096 PDRG1Q9NUG6 133 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 BARHL2Q9NY43 387 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 METRNQ9UJH8 293 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 TANC1Q9C0D5 1861 aa17.3■□□□□ 0.36
CALD1-215ENST00000472096 KIAA0355O15063 1070 aa17.29■□□□□ 0.36
CALD1-215ENST00000472096 MMP3P08254 477 aa17.29■□□□□ 0.36
CALD1-215ENST00000472096 SCG2P13521 617 aa17.29■□□□□ 0.36
CALD1-215ENST00000472096 UBA1P22314 1058 aaKnown RBP17.29■□□□□ 0.36
CALD1-215ENST00000472096 ADCY7P51828 1080 aa17.29■□□□□ 0.36
CALD1-215ENST00000472096 CCT2P78371 535 aaKnown RBP17.29■□□□□ 0.36
CALD1-215ENST00000472096 GNPTABQ3T906 1256 aa17.29■□□□□ 0.36
CALD1-215ENST00000472096 LBHD1Q9BQE6 289 aaPredicted RBP17.29■□□□□ 0.36
CALD1-215ENST00000472096 MTG1Q9BT17 334 aaPredicted RBP17.29■□□□□ 0.36
CALD1-215ENST00000472096 SEZ6LQ9BYH1 1024 aa17.29■□□□□ 0.36
CALD1-215ENST00000472096 NCOA5Q9HCD5 579 aaKnown RBP17.29■□□□□ 0.36
CALD1-215ENST00000472096 RIC8AQ9NPQ8 531 aa17.29■□□□□ 0.36
CALD1-215ENST00000472096 TBX21Q9UL17 535 aa17.29■□□□□ 0.36
CALD1-215ENST00000472096 BOLA1Q9Y3E2 137 aa17.29■□□□□ 0.36
CALD1-215ENST00000472096 SPDYE3A6NKU9 549 aa17.28■□□□□ 0.36
CALD1-215ENST00000472096 PRPF3O43395 683 aaKnown RBP17.28■□□□□ 0.36
CALD1-215ENST00000472096 KPNA6O60684 536 aa17.28■□□□□ 0.36
CALD1-215ENST00000472096 IFNAR1P17181 557 aa17.28■□□□□ 0.36
CALD1-215ENST00000472096 PKN1Q16512 942 aa17.28■□□□□ 0.36
CALD1-215ENST00000472096 XRRA1Q6P2D8 792 aa17.28■□□□□ 0.36
CALD1-215ENST00000472096 TEX2Q8IWB9 1127 aa17.28■□□□□ 0.36
CALD1-215ENST00000472096 PHKBQ93100 1093 aa17.28■□□□□ 0.36
CALD1-215ENST00000472096 ZNF274Q96GC6 653 aaPredicted RBP17.28■□□□□ 0.36
CALD1-215ENST00000472096 RNF26Q9BY78 433 aaPredicted RBP17.28■□□□□ 0.36
CALD1-215ENST00000472096 UBE2OQ9C0C9 1292 aaKnown RBP17.28■□□□□ 0.36
CALD1-215ENST00000472096 TMEM39AQ9NV64 488 aa17.28■□□□□ 0.36
CALD1-215ENST00000472096 TLR3O15455 904 aaKnown RBP17.27■□□□□ 0.36
CALD1-215ENST00000472096 GGPS1O95749 300 aa17.27■□□□□ 0.36
CALD1-215ENST00000472096 CD4P01730 458 aa17.27■□□□□ 0.36
CALD1-215ENST00000472096 TGFB3P10600 412 aa17.27■□□□□ 0.36
CALD1-215ENST00000472096 ITGB8P26012 769 aa17.27■□□□□ 0.36
CALD1-215ENST00000472096 ICAM3P32942 547 aa17.27■□□□□ 0.36
CALD1-215ENST00000472096 SEMA3FQ13275 785 aa17.27■□□□□ 0.36
CALD1-215ENST00000472096 LAMC2Q13753 1193 aa17.27■□□□□ 0.36
CALD1-215ENST00000472096 C8orf34Q49A92 452 aa17.27■□□□□ 0.36
CALD1-215ENST00000472096 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.36
CALD1-215ENST00000472096 DHX37Q8IY37 1157 aaKnown RBP17.27■□□□□ 0.36
CALD1-215ENST00000472096 PPTC7Q8NI37 304 aa17.27■□□□□ 0.36
CALD1-215ENST00000472096 BADQ92934 168 aa17.27■□□□□ 0.36
CALD1-215ENST00000472096 PCDHA6Q9UN73 950 aa17.27■□□□□ 0.36
CALD1-215ENST00000472096 PCDHA8Q9Y5H6 950 aa17.27■□□□□ 0.36
CALD1-215ENST00000472096 TRIP12Q14669 1992 aaPredicted RBP17.27■□□□□ 0.36
CALD1-215ENST00000472096 ESYT2A0FGR8 921 aa17.26■□□□□ 0.35
CALD1-215ENST00000472096 SMCO2A6NFE2 343 aa17.26■□□□□ 0.35
CALD1-215ENST00000472096 FIBPO43427 364 aa17.26■□□□□ 0.35
CALD1-215ENST00000472096 PPFIA3O75145 1194 aa17.26■□□□□ 0.35
CALD1-215ENST00000472096 FXR1P51114 621 aaKnown RBP eCLIP17.26■□□□□ 0.35
CALD1-215ENST00000472096 AKAP17AQ02040 695 aaKnown RBP17.26■□□□□ 0.35
CALD1-215ENST00000472096 SP2Q02086 613 aa17.26■□□□□ 0.35
CALD1-215ENST00000472096 MYSM1Q5VVJ2 828 aa17.26■□□□□ 0.35
CALD1-215ENST00000472096 PGBD1Q96JS3 809 aa17.26■□□□□ 0.35
CALD1-215ENST00000472096 SLC26A6Q9BXS9 759 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms