RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 TINF2Q9BSI4 451 aa21.73■■□□□ 1.07
PSPC1-203ENST00000471658 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.73■■□□□ 1.07
PSPC1-203ENST00000471658 B4DLN1 442 aa21.73■■□□□ 1.07
PSPC1-203ENST00000471658 MARCH6O60337 910 aa21.73■■□□□ 1.07
PSPC1-203ENST00000471658 ATP9AO75110 1047 aa21.73■■□□□ 1.07
PSPC1-203ENST00000471658 MCM4P33991 863 aa21.73■■□□□ 1.07
PSPC1-203ENST00000471658 MTMR1Q13613 665 aa21.73■■□□□ 1.07
PSPC1-203ENST00000471658 NLRX1Q86UT6 975 aa21.73■■□□□ 1.07
PSPC1-203ENST00000471658 MPHOSPH6Q99547 160 aaKnown RBP21.73■■□□□ 1.07
PSPC1-203ENST00000471658 VWA3AA6NCI4 1184 aa21.72■■□□□ 1.07
PSPC1-203ENST00000471658 AXDND1Q5T1B0 1012 aaPredicted RBP21.72■■□□□ 1.07
PSPC1-203ENST00000471658 TMEM87AQ8NBN3 555 aa21.72■■□□□ 1.07
PSPC1-203ENST00000471658 BCAS3Q9H6U6 928 aa21.72■■□□□ 1.07
PSPC1-203ENST00000471658 AGO4Q9HCK5 861 aaKnown RBP21.72■■□□□ 1.07
PSPC1-203ENST00000471658 PDGFCQ9NRA1 345 aa21.72■■□□□ 1.07
PSPC1-203ENST00000471658 SRRDQ9UH36 339 aa21.72■■□□□ 1.07
PSPC1-203ENST00000471658 SRPRBQ9Y5M8 271 aaKnown RBP21.72■■□□□ 1.07
PSPC1-203ENST00000471658 MCM3APO60318 1980 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 LRRC37A2A6NM11 1700 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 LOC102724159A0A0B4J2E5 919 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 STAM2O75886 525 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 CYP2C19P33261 490 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 SETQ01105 290 aaPredicted RBP21.71■■□□□ 1.07
PSPC1-203ENST00000471658 PWP2Q15269 919 aaKnown RBP21.71■■□□□ 1.07
PSPC1-203ENST00000471658 SPECC1Q5M775 1068 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 PRAMEF19Q5SWL8 479 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 TMEM63BQ5T3F8 832 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 JMYQ8N9B5 988 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 KRI1Q8N9T8 703 aaKnown RBP21.71■■□□□ 1.07
PSPC1-203ENST00000471658 GPRASP2Q96D09 838 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 ZNF577Q9BSK1 485 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 KATNBL1Q9H079 304 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 LMBRD1Q9NUN5 540 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 MORC2Q9Y6X9 1032 aaPredicted RBP21.71■■□□□ 1.07
PSPC1-203ENST00000471658 ELP1O95163 1332 aa21.71■■□□□ 1.07
PSPC1-203ENST00000471658 SPATA31C2B4DYI2 1134 aa21.7■■□□□ 1.06
PSPC1-203ENST00000471658 LAD1O00515 517 aa21.7■■□□□ 1.06
PSPC1-203ENST00000471658 PRPHP41219 470 aa21.7■■□□□ 1.06
PSPC1-203ENST00000471658 TECP42680 631 aa21.7■■□□□ 1.06
PSPC1-203ENST00000471658 SP2Q02086 613 aa21.7■■□□□ 1.06
PSPC1-203ENST00000471658 ITGB3BPQ13352 177 aaPredicted RBP21.7■■□□□ 1.06
PSPC1-203ENST00000471658 ARL6IP4Q66PJ3 421 aaKnown RBP21.7■■□□□ 1.06
PSPC1-203ENST00000471658 DTHD1Q6ZMT9 781 aa21.7■■□□□ 1.06
PSPC1-203ENST00000471658 SLC5A5Q92911 643 aa21.7■■□□□ 1.06
PSPC1-203ENST00000471658 CSRNP2Q9H175 543 aa21.7■■□□□ 1.06
PSPC1-203ENST00000471658 IPO5O00410 1097 aaKnown RBP21.69■■□□□ 1.06
PSPC1-203ENST00000471658 TBX3O15119 743 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 SORBS3O60504 671 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 IGHA2P01877 340 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 XRCC5P13010 732 aaKnown RBP21.69■■□□□ 1.06
PSPC1-203ENST00000471658 GNPTABQ3T906 1256 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 OLFML2BQ68BL8 750 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 TAPT1Q6NXT6 567 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 FAM20AQ96MK3 541 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 TTC12Q9H892 705 aaPredicted RBP21.69■■□□□ 1.06
PSPC1-203ENST00000471658 SYNGAP1Q96PV0 1343 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 DDX39AO00148 427 aaKnown RBP21.69■■□□□ 1.06
PSPC1-203ENST00000471658 DHX15O43143 795 aaKnown RBP21.69■■□□□ 1.06
PSPC1-203ENST00000471658 ARIH2O95376 493 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 PTGS1P23219 599 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 HOXD10P28358 340 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 ICAM3P32942 547 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 CSPP1Q1MSJ5 1256 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 TRIB2Q92519 343 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 FERMT2Q96AC1 680 aa21.69■■□□□ 1.06
PSPC1-203ENST00000471658 PP2D1A8MPX8 630 aa21.68■■□□□ 1.06
PSPC1-203ENST00000471658 FOXN1O15353 648 aa21.68■■□□□ 1.06
PSPC1-203ENST00000471658 CUTAO60888 179 aa21.68■■□□□ 1.06
PSPC1-203ENST00000471658 PSMD10O75832 226 aa21.68■■□□□ 1.06
PSPC1-203ENST00000471658 KCNA2P16389 499 aa21.68■■□□□ 1.06
PSPC1-203ENST00000471658 CDC25AP30304 524 aa21.68■■□□□ 1.06
PSPC1-203ENST00000471658 ACVR2BQ13705 512 aa21.68■■□□□ 1.06
PSPC1-203ENST00000471658 LY6KQ17RY6 165 aa21.68■■□□□ 1.06
PSPC1-203ENST00000471658 SHC4Q6S5L8 630 aa21.68■■□□□ 1.06
PSPC1-203ENST00000471658 USP49Q70CQ1 688 aa21.68■■□□□ 1.06
PSPC1-203ENST00000471658 SLFN12Q8IYM2 578 aa21.68■■□□□ 1.06
PSPC1-203ENST00000471658 MSL3Q8N5Y2 521 aaKnown RBP21.68■■□□□ 1.06
PSPC1-203ENST00000471658 PCDHA12Q9UN75 941 aa21.68■■□□□ 1.06
PSPC1-203ENST00000471658 ELNP15502 786 aa21.67■■□□□ 1.06
PSPC1-203ENST00000471658 TRIM32Q13049 653 aa21.67■■□□□ 1.06
PSPC1-203ENST00000471658 NFKBIBQ15653 356 aa21.67■■□□□ 1.06
PSPC1-203ENST00000471658 LRCH2Q5VUJ6 765 aa21.67■■□□□ 1.06
PSPC1-203ENST00000471658 ADALQ6DHV7 355 aa21.67■■□□□ 1.06
PSPC1-203ENST00000471658 VTA1Q9NP79 307 aa21.67■■□□□ 1.06
PSPC1-203ENST00000471658 VAV3Q9UKW4 847 aa21.67■■□□□ 1.06
PSPC1-203ENST00000471658 ZHX1Q9UKY1 873 aaPredicted RBP21.67■■□□□ 1.06
PSPC1-203ENST00000471658 TELO2Q9Y4R8 837 aa21.67■■□□□ 1.06
PSPC1-203ENST00000471658 TRIM17Q9Y577 477 aa21.67■■□□□ 1.06
PSPC1-203ENST00000471658 POTEMA6NI47 508 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 GOLGA6L22H0YM25 854 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 MAFGO15525 162 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 GAS7O60861 476 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 OTOP1Q7RTM1 612 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 ABHD16BQ9H3Z7 469 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.66■■□□□ 1.06
PSPC1-203ENST00000471658 GNRH1P01148 92 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 HSPA8P11142 646 aaKnown RBP21.66■■□□□ 1.06
PSPC1-203ENST00000471658 ADCYAP1R1P41586 468 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 FXR2P51116 673 aaKnown RBP eCLIP21.66■■□□□ 1.06
PSPC1-203ENST00000471658 SPIRE1Q08AE8 756 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms