RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 GH1P01241 217 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 TGFB3P10600 412 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 UBA1P22314 1058 aaKnown RBP28.72■■■□□ 2.19
COL15A1-203ENST00000471477 KRT2P35908 639 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 SP2Q02086 613 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 CUL4AQ13619 759 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 FSCN1Q16658 493 aaKnown RBP28.72■■■□□ 2.19
COL15A1-203ENST00000471477 GNASQ5JWF2 1037 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 CYP2W1Q8TAV3 490 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 SNX21Q969T3 373 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 GPRASP2Q96D09 838 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 MXRA8Q9BRK3 442 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 C11orf49Q9H6J7 331 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 BRMS1Q9HCU9 246 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 JADE2Q9NQC1 790 aa28.72■■■□□ 2.19
COL15A1-203ENST00000471477 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.72■■■□□ 2.19
COL15A1-203ENST00000471477 CYP3A4P08684 503 aa28.71■■■□□ 2.19
COL15A1-203ENST00000471477 ZNF76P36508 570 aa28.71■■■□□ 2.19
COL15A1-203ENST00000471477 ARHGAP1Q07960 439 aa28.71■■■□□ 2.19
COL15A1-203ENST00000471477 KCNA10Q16322 511 aa28.71■■■□□ 2.19
COL15A1-203ENST00000471477 CCSAPQ6IQ19 270 aaPredicted RBP28.71■■■□□ 2.19
COL15A1-203ENST00000471477 KRT25Q7Z3Z0 450 aa28.71■■■□□ 2.19
COL15A1-203ENST00000471477 TBCKQ8TEA7 893 aa28.71■■■□□ 2.19
COL15A1-203ENST00000471477 COL6A1P12109 1028 aa28.7■■■□□ 2.19
COL15A1-203ENST00000471477 GJB2P29033 226 aa28.7■■■□□ 2.19
COL15A1-203ENST00000471477 NR5A1Q13285 461 aa28.7■■■□□ 2.19
COL15A1-203ENST00000471477 MTMR1Q13613 665 aa28.7■■■□□ 2.19
COL15A1-203ENST00000471477 CEP55Q53EZ4 464 aa28.7■■■□□ 2.19
COL15A1-203ENST00000471477 SMC3Q9UQE7 1217 aa28.7■■■□□ 2.19
COL15A1-203ENST00000471477 ALPK3Q96L96 1907 aa28.69■■■□□ 2.18
COL15A1-203ENST00000471477 SORBS3O60504 671 aa28.69■■■□□ 2.18
COL15A1-203ENST00000471477 GGPS1O95749 300 aa28.69■■■□□ 2.18
COL15A1-203ENST00000471477 NONOQ15233 471 aaKnown RBP eCLIP28.69■■■□□ 2.18
COL15A1-203ENST00000471477 DIS3L2Q8IYB7 885 aaKnown RBP28.69■■■□□ 2.18
COL15A1-203ENST00000471477 PCSK9Q8NBP7 692 aaKnown RBP28.69■■■□□ 2.18
COL15A1-203ENST00000471477 CDHR1Q96JP9 859 aa28.69■■■□□ 2.18
COL15A1-203ENST00000471477 TSEN34Q9BSV6 310 aaKnown RBP28.69■■■□□ 2.18
COL15A1-203ENST00000471477 SENP6Q9GZR1 1112 aaPredicted RBP28.69■■■□□ 2.18
COL15A1-203ENST00000471477 PHF24Q9UPV7 400 aa28.69■■■□□ 2.18
COL15A1-203ENST00000471477 KIF3AQ9Y496 699 aa28.69■■■□□ 2.18
COL15A1-203ENST00000471477 CCDC194A0A1B0GVG4 234 aa28.69■■■□□ 2.18
COL15A1-203ENST00000471477 FAM86B1E9PN63 330 aa28.69■■■□□ 2.18
COL15A1-203ENST00000471477 EDIL3O43854 480 aa28.69■■■□□ 2.18
COL15A1-203ENST00000471477 FAM86B2P0C5J1 330 aa28.69■■■□□ 2.18
COL15A1-203ENST00000471477 CELF3Q5SZQ8 465 aaKnown RBP28.69■■■□□ 2.18
COL15A1-203ENST00000471477 DHX37Q8IY37 1157 aaKnown RBP28.69■■■□□ 2.18
COL15A1-203ENST00000471477 FERMT2Q96AC1 680 aa28.69■■■□□ 2.18
COL15A1-203ENST00000471477 MOXD2PA6NHM9 499 aa28.68■■■□□ 2.18
COL15A1-203ENST00000471477 BTBD18B2RXH4 712 aa28.68■■■□□ 2.18
COL15A1-203ENST00000471477 ASGR1P07306 291 aa28.68■■■□□ 2.18
COL15A1-203ENST00000471477 CPT1AP50416 773 aa28.68■■■□□ 2.18
COL15A1-203ENST00000471477 ACLYP53396 1101 aa28.68■■■□□ 2.18
COL15A1-203ENST00000471477 PIK3AP1Q6ZUJ8 805 aa28.68■■■□□ 2.18
COL15A1-203ENST00000471477 HSCBQ8IWL3 235 aa28.68■■■□□ 2.18
COL15A1-203ENST00000471477 FBXO18Q8NFZ0 1043 aa28.68■■■□□ 2.18
COL15A1-203ENST00000471477 TNFRSF25Q93038 417 aa28.68■■■□□ 2.18
COL15A1-203ENST00000471477 EMID1Q96A84 441 aaPredicted RBP28.68■■■□□ 2.18
COL15A1-203ENST00000471477 BCAS3Q9H6U6 928 aa28.68■■■□□ 2.18
COL15A1-203ENST00000471477 DNAH12Q6ZR08 3092 aa28.67■■■□□ 2.18
COL15A1-203ENST00000471477 MEIS1O00470 390 aa28.67■■■□□ 2.18
COL15A1-203ENST00000471477 LAMC2Q13753 1193 aa28.67■■■□□ 2.18
COL15A1-203ENST00000471477 NEDD9Q14511 834 aa28.67■■■□□ 2.18
COL15A1-203ENST00000471477 INF2Q27J81 1249 aa28.67■■■□□ 2.18
COL15A1-203ENST00000471477 EARS2Q5JPH6 523 aaKnown RBP28.67■■■□□ 2.18
COL15A1-203ENST00000471477 MYSM1Q5VVJ2 828 aa28.67■■■□□ 2.18
COL15A1-203ENST00000471477 NIPA1Q7RTP0 329 aa28.67■■■□□ 2.18
COL15A1-203ENST00000471477 AFG1LQ8WV93 481 aa28.67■■■□□ 2.18
COL15A1-203ENST00000471477 SENP7Q9BQF6 1050 aa28.67■■■□□ 2.18
COL15A1-203ENST00000471477 KCNH7Q9NS40 1196 aa28.67■■■□□ 2.18
COL15A1-203ENST00000471477 PKD2L1Q9P0L9 805 aa28.67■■■□□ 2.18
COL15A1-203ENST00000471477 IGLV3-22A0A075B6J6 115 aa28.66■■■□□ 2.18
COL15A1-203ENST00000471477 A0A1W2PQ45 241 aaPredicted RBP28.66■■■□□ 2.18
COL15A1-203ENST00000471477 A0A1W2PQY0 241 aa28.66■■■□□ 2.18
COL15A1-203ENST00000471477 A6NJR5 290 aa28.66■■■□□ 2.18
COL15A1-203ENST00000471477 MAFGO15525 162 aa28.66■■■□□ 2.18
COL15A1-203ENST00000471477 ZEB2O60315 1214 aa28.66■■■□□ 2.18
COL15A1-203ENST00000471477 ATP9AO75110 1047 aa28.66■■■□□ 2.18
COL15A1-203ENST00000471477 ARP10275 920 aa28.66■■■□□ 2.18
COL15A1-203ENST00000471477 KCNA2P16389 499 aa28.66■■■□□ 2.18
COL15A1-203ENST00000471477 CIITAP33076 1130 aa28.66■■■□□ 2.18
COL15A1-203ENST00000471477 USP11P51784 963 aa28.66■■■□□ 2.18
COL15A1-203ENST00000471477 SAFBQ15424 915 aaKnown RBP eCLIP28.66■■■□□ 2.18
COL15A1-203ENST00000471477 PLA2G4DQ86XP0 818 aa28.66■■■□□ 2.18
COL15A1-203ENST00000471477 MLXIPQ9HAP2 919 aa28.66■■■□□ 2.18
COL15A1-203ENST00000471477 FAM205CA6NFA0 338 aa28.65■■■□□ 2.18
COL15A1-203ENST00000471477 BRDTQ58F21 947 aaPredicted RBP28.65■■■□□ 2.18
COL15A1-203ENST00000471477 CYFIP1Q7L576 1253 aa28.65■■■□□ 2.18
COL15A1-203ENST00000471477 MMP3P08254 477 aa28.64■■■□□ 2.18
COL15A1-203ENST00000471477 CXCL17Q6UXB2 119 aa28.64■■■□□ 2.18
COL15A1-203ENST00000471477 PPTC7Q8NI37 304 aa28.64■■■□□ 2.18
COL15A1-203ENST00000471477 SPATA33Q96N06 139 aa28.64■■■□□ 2.18
COL15A1-203ENST00000471477 MYL3P08590 195 aa28.63■■■□□ 2.17
COL15A1-203ENST00000471477 SETQ01105 290 aaPredicted RBP28.63■■■□□ 2.17
COL15A1-203ENST00000471477 HSDL1Q3SXM5 330 aa28.63■■■□□ 2.17
COL15A1-203ENST00000471477 PRR16Q569H4 304 aa28.63■■■□□ 2.17
COL15A1-203ENST00000471477 METTL7BQ6UX53 244 aa28.63■■■□□ 2.17
COL15A1-203ENST00000471477 GIMAP8Q8ND71 665 aaPredicted RBP28.63■■■□□ 2.17
COL15A1-203ENST00000471477 AGO4Q9HCK5 861 aaKnown RBP28.63■■■□□ 2.17
COL15A1-203ENST00000471477 TDP2O95551 362 aa28.62■■■□□ 2.17
COL15A1-203ENST00000471477 ATN1P54259 1190 aaPredicted RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms