RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 EPB41L1Q9H4G0 881 aa5.07□□□□□ -1.6
COPS3-206ENST00000471414 NTMQ9P121 344 aa5.07□□□□□ -1.6
COPS3-206ENST00000471414 ADAMTS20P59510 1910 aa5.06□□□□□ -1.6
COPS3-206ENST00000471414 TCRBV5S2A0A599 114 aa5.06□□□□□ -1.6
COPS3-206ENST00000471414 IQCA1LA6NCM1 817 aa5.06□□□□□ -1.6
COPS3-206ENST00000471414 HGSO14964 777 aaPredicted RBP5.06□□□□□ -1.6
COPS3-206ENST00000471414 PRICKLE3O43900 615 aaPredicted RBP5.06□□□□□ -1.6
COPS3-206ENST00000471414 SYN1P17600 705 aa5.06□□□□□ -1.6
COPS3-206ENST00000471414 RPL13P26373 211 aaKnown RBP5.06□□□□□ -1.6
COPS3-206ENST00000471414 CHRNA2Q15822 529 aa5.06□□□□□ -1.6
COPS3-206ENST00000471414 NAALADL2Q58DX5 795 aa5.06□□□□□ -1.6
COPS3-206ENST00000471414 STEAP3Q658P3 488 aa5.06□□□□□ -1.6
COPS3-206ENST00000471414 STYK1Q6J9G0 422 aa5.06□□□□□ -1.6
COPS3-206ENST00000471414 ZBTB8AQ96BR9 441 aa5.06□□□□□ -1.6
COPS3-206ENST00000471414 NGRNQ9NPE2 291 aaKnown RBP5.06□□□□□ -1.6
COPS3-206ENST00000471414 CLDND1Q9NY35 253 aa5.06□□□□□ -1.6
COPS3-206ENST00000471414 COA3Q9Y2R0 106 aaPredicted RBP5.06□□□□□ -1.6
COPS3-206ENST00000471414 R3HCC1Q9Y3T6 440 aaKnown RBP5.06□□□□□ -1.6
COPS3-206ENST00000471414 ADCY3O60266 1144 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 PABPC1P11940 636 aaKnown RBP5.05□□□□□ -1.6
COPS3-206ENST00000471414 SARSP49591 514 aaKnown RBP5.05□□□□□ -1.6
COPS3-206ENST00000471414 ADAM9Q13443 819 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 SMAD4Q13485 552 aaKnown RBP5.05□□□□□ -1.6
COPS3-206ENST00000471414 NT5DC1Q5TFE4 455 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 NBPF6Q5VWK0 638 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 LBX2Q6XYB7 198 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 ZDHHC14Q8IZN3 488 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 TTLL6Q8N841 843 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 ARRDC4Q8NCT1 418 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 TTLL11Q8NHH1 800 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 PHOSPHO1Q8TCT1 267 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 DCAF4Q8WV16 495 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 NBPF4Q96M43 638 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 ZFYVE21Q9BQ24 234 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 PHF20Q9BVI0 1012 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 LNPKQ9C0E8 428 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 DTLQ9NZJ0 730 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 WASF3Q9UPY6 502 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 DUSP10Q9Y6W6 482 aa5.05□□□□□ -1.6
COPS3-206ENST00000471414 DGKIO75912 1065 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 LRG1P02750 347 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 STAT5AP42229 794 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 SERINC3Q13530 473 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 RASGRF1Q13972 1273 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 RTP5Q14D33 572 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 FAM26FQ5R3K3 315 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 YOD1Q5VVQ6 348 aaPredicted RBP5.04□□□□□ -1.6
COPS3-206ENST00000471414 TEPPQ6URK8 271 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 CD300LDQ6UXZ3 194 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 ZC3H18Q86VM9 953 aaKnown RBP5.04□□□□□ -1.6
COPS3-206ENST00000471414 LRRC47Q8N1G4 583 aaKnown RBP5.04□□□□□ -1.6
COPS3-206ENST00000471414 ADAMTS17Q8TE56 1095 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 ARMC5Q96C12 935 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 CCDC113Q9H0I3 377 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 SMOC1Q9H4F8 434 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 SLC6A20Q9NP91 592 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 PODXL2Q9NZ53 605 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 PPARGC1AQ9UBK2 798 aaKnown RBP5.04□□□□□ -1.6
COPS3-206ENST00000471414 CNOT11Q9UKZ1 510 aaKnown RBP5.04□□□□□ -1.6
COPS3-206ENST00000471414 PCDHB4Q9Y5E5 795 aa5.04□□□□□ -1.6
COPS3-206ENST00000471414 TRAV20A0A0B4J274 112 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 PRODHO43272 600 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 ZNF28P17035 718 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 EFEMP1Q12805 493 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 KCNT2Q6UVM3 1135 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 NSMFQ6X4W1 530 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 TTLL7Q6ZT98 887 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 USP53Q70EK8 1073 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 SPATC1Q76KD6 591 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 OTOP3Q7RTS5 596 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 PROSER1Q86XN7 944 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 CKAP2LQ8IYA6 745 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.03□□□□□ -1.6
COPS3-206ENST00000471414 TOE1Q96GM8 510 aaKnown RBP5.03□□□□□ -1.6
COPS3-206ENST00000471414 SPATA9Q9BWV2 254 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 MYOTQ9UBF9 498 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 ASH2LQ9UBL3 628 aa5.03□□□□□ -1.6
COPS3-206ENST00000471414 PDPK1O15530 556 aa5.02□□□□□ -1.61
COPS3-206ENST00000471414 STK10O94804 968 aaKnown RBP5.02□□□□□ -1.61
COPS3-206ENST00000471414 GRK2P25098 689 aa5.02□□□□□ -1.61
COPS3-206ENST00000471414 GRK3P35626 688 aa5.02□□□□□ -1.61
COPS3-206ENST00000471414 GPR85P60893 370 aa5.02□□□□□ -1.61
COPS3-206ENST00000471414 NKX3-2P78367 333 aa5.02□□□□□ -1.61
COPS3-206ENST00000471414 NFKB2Q00653 900 aa5.02□□□□□ -1.61
COPS3-206ENST00000471414 KIZQ2M2Z5 673 aa5.02□□□□□ -1.61
COPS3-206ENST00000471414 UHMK1Q8TAS1 419 aaKnown RBP5.02□□□□□ -1.61
COPS3-206ENST00000471414 TRIM55Q9BYV6 548 aa5.02□□□□□ -1.61
COPS3-206ENST00000471414 ASXL2Q76L83 1435 aa5.02□□□□□ -1.61
COPS3-206ENST00000471414 WNT9AO14904 365 aa5.01□□□□□ -1.61
COPS3-206ENST00000471414 SMARCA5O60264 1052 aaPredicted RBP5.01□□□□□ -1.61
COPS3-206ENST00000471414 C6orf222P0C671 652 aaPredicted RBP5.01□□□□□ -1.61
COPS3-206ENST00000471414 EPHA5P54756 1037 aa5.01□□□□□ -1.61
COPS3-206ENST00000471414 GJA9P57773 515 aa5.01□□□□□ -1.61
COPS3-206ENST00000471414 RBL2Q08999 1139 aa5.01□□□□□ -1.61
COPS3-206ENST00000471414 PIP4K2CQ8TBX8 421 aa5.01□□□□□ -1.61
COPS3-206ENST00000471414 CLEC4DQ8WXI8 215 aa5.01□□□□□ -1.61
COPS3-206ENST00000471414 CHAMP1Q96JM3 812 aa5.01□□□□□ -1.61
COPS3-206ENST00000471414 RBM15Q96T37 977 aaKnown RBP eCLIP5.01□□□□□ -1.61
COPS3-206ENST00000471414 JAM3Q9BX67 310 aa5.01□□□□□ -1.61
COPS3-206ENST00000471414 BLACEA4D250 179 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms